Mizuhopecten yessoensis (Yesso scallop): 110450428
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Entry
110450428 CDS
T05079
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04137
Mitophagy - animal
myi04140
Autophagy - animal
myi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110450428
04137 Mitophagy - animal
110450428
04148 Efferocytosis
110450428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myi03000
]
110450428
Transcription factors [BR:
myi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110450428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
HIF-1a_CTAD
PAS_4
HIF-1
HLH
Diguanyl_cycl_sensor
RXT2_N
Motif
Other DBs
NCBI-GeneID:
110450428
NCBI-ProteinID:
XP_021353618
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MTASGKRRNSEKRKEKSRDAARCRRGKETEVFSELAKELPLPPFLNQLDKASVMRVAISH
LKIRQIMDKMDVQDLESKESLEDVDNLYGKALDGFVVIISDNCDIAYVSESVAKYLGIPQ
IDMIGQSLYDFTHPCDHDEIADMMSAKSHKGMEQQAEEHSMFVRMKCTLTSKGRSVNLKS
ASYKVIKFTGKLIEIREERMVRKEEEEEEVDDLDEDMDQEEEEKMEKEPRRTGYFLGVGE
PIPHPSNIEVLLDCKTVLSRHNMDSKFTYCDSRMKELVGYSSEELIGKSIFSYHHAQDSS
IIDKAYKDLFAKGQMMTGQYRFLVKQGGFVWVITQATVIYNSRTQKPQCIVCVHYLTSGV
EQDNVVLSDVQKAEVKTERKKDVKEVIQWSFGPSTKDVFVSKTPEDEKADFYFCEDVPKS
CSKQMDLQHLAPIAGDACVPLDTTFFNGPAKQEQGNNDPHVIVLKEEPRMPLCSGHDPKM
ISPTSTACSTPLSASPMHSPAPPITDDFLITINPADIVAMDQFFTTMDMTQMQMSDSCLA
GEEIDMDTRAPYIPMDSSDDFSLLPPAPDELFNLGGDFNPGLFGRTESVFTSKDKLFPEE
PPQKRRPSLWDMLEGSTTVATLKRPVDNGIMQMKRPLDKTNQEKGPPIAKKSRPDIGHKS
LSRGPLGSDSVLMNLLLTGEDHSYGYKVFNARNEKTANTSSNIKQLPPNASKWGLTKSVF
LPKITQHDCEVNAPSFPCDGLLQGDAIIQALERDAYPQQII
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttcgggaaaacgaaggaattcagagaaaagaaaggagaagtcccgcgatgct
gctcggtgtcggcgtgggaaggagacggaggtgttttcggagctggccaaagagctgccc
cttccaccgtttctcaaccaactggacaaagcatcagtgatgagagtggctattagccac
ctcaagatacgccaaatcatggacaaaatggatgttcaagatttggaatccaaggagagc
cttgaggatgttgacaacctctacgggaaggctttagatggctttgtagtcattatttca
gacaactgtgacatagcctacgtgtccgagagcgtggccaagtaccttggcataccccag
attgacatgattggtcagagtctgtatgacttcacccacccatgtgaccacgatgagatt
gcagacatgatgtcagcgaagtcccacaagggaatggaacagcaagctgaagaacatagc
atgtttgtgaggatgaaatgtacacttaccagcaaaggcagaagtgtgaatctcaagtca
gcctcctacaaggtgataaagtttactgggaagctgatagagatcagggaggagagaatg
gtacggaaggaagaagaggaagaggaggtagatgatttggatgaagacatggaccaggag
gaggaggagaagatggagaaggagccacgtcgcactggatatttccttggggtgggagag
cccataccacacccctctaacatagaggtacttcttgattgtaaaactgtcctcagcaga
cacaacatggactcaaagttcacctactgcgacagcaggatgaaggaattggttggatac
agtagtgaggagttgattggtaaatccatcttttcctatcaccacgcccaggatagcagt
atcattgacaaggcctacaaggacttgtttgctaaaggccagatgatgaccggtcagtac
agattcctggtcaagcagggtggatttgtgtgggtcataacgcaagccactgtcatctac
aacagtcgcactcaaaagccccagtgtattgtgtgcgtccactacctcacaagtggagta
gaacaggataacgtggttctgtcggatgtccagaaggctgaagtcaagacagagaggaag
aaggatgtgaaggaggttatccagtggagctttggaccaagcacaaaggacgtattcgtc
agtaagacccctgaagatgagaaggcagacttctacttctgcgaagatgttccgaaatct
tgcagcaagcaaatggacctacaacatctggctccaatagctggcgatgcttgcgttccc
ttggatacaactttcttcaatggaccagctaagcaggagcaaggaaataatgacccgcac
gtgattgtcctgaaagaggagccaagaatgccgttgtgcagcggacacgacccaaagatg
atcagtccgaccagcacagcttgttccaccccattaagtgcatctcccatgcacagccca
gctcctccgatcacagacgacttcctgatcacgataaacccggccgatattgttgctatg
gaccaattcttcaccaccatggacatgacacagatgcagatgtcggatagttgcctagca
ggggaggaaatagacatggacaccagagccccctacatcccgatggactcgagtgatgac
ttcagcctgctgccccccgcaccagatgagctgtttaatctcggcggagactttaatccc
ggactgtttggccgcactgaatcagttttcacctcgaaagataagctgttcccagaggaa
ccaccacaaaagcgacgtccaagtctgtgggacatgttagaagggagtacgactgttgcc
acactcaaacggcctgtcgacaacggcatcatgcagatgaaacggccactggataaaacc
aatcaagagaagggtccaccaatcgccaaaaagtctcgccctgatatagggcataaatca
ctgagtcgaggcccattgggcagtgacagtgttctcatgaacttacttttaaccggcgaa
gaccactcttacggatataaggtttttaatgcacgaaatgaaaagacagcaaatacatca
tcaaacattaaacagttacccccaaatgcttcgaagtggggcctcacaaaaagtgtgttt
ctacctaagataacacaacacgactgtgaggtcaatgcaccgtccttcccttgtgacggt
ctgcttcaaggcgacgctataatacaggccttggaaagagatgcttatccccagcaaatt
atttga
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