Mizuhopecten yessoensis (Yesso scallop): 110450435
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Entry
110450435 CDS
T05079
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110450435
Spliceosome [BR:
myi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110450435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_15
PPTA
DUF908
Motif
Other DBs
NCBI-GeneID:
110450435
NCBI-ProteinID:
XP_021353642
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MGMFTSGFPSLHCNIDVGCKKCNDMEDVGDNPGITIKQEIKQEIKQEIIEDASKEEPEKE
TLPETVILNTELEKYWKAVRDNPSDFTGWTYLLQYVEQENKIEAAREAYDAFFGHYPYCY
GYWKKYADMEKRHGNLEKATEVFDKGVVAIPLSIELWLHYINFYIGEYTSTEQGESDIRK
LYERALSAAGHDFRSDKLWDSYISWEKDQERVTALYTRLLAIPTQLYSHHFDNFKQHVYM
HNPKEILSLDDFLKLRQDVVAKSTNMDEEDEDAVPVGDVAPPGEEDVPPGMETGGGKGDE
AEINKIKERIIQIQEGTFKKTEEEVSKRWNYEEAIKRPYFHVKPLERSQLKNWREYLDYE
MQNGNYTRVVTLFERCMIASALYEDFWMKYAKYMEDHGAEGVRNVYTRACKVHLPKKPYI
HLAWAAFEERQGNHSAAWEILANLDKAVPGLVMVSMRRISLERRTGSKEDAEALFQEYIE
NAAQPEIGSYFSIKYARYLLKICGEREQAKKILAEAIEKDKGNLKLYLQLIDLEYQNFPV
DEEHITEVFSMILECENFPLETKVKMSQRKLEFLEDFGGEISKLKEAYDEHQKLMKDLHA
EHKKRPHETSGHSHEEPSEKRAKNESVQNGAGDMSVPPDGGHANYPYHWGGYQNSGYNYA
PQWGGHYGTGYHHGYHQS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtttacttccggttttcccagcctgcattgcaatattgatgtcggctgcaag
aagtgtaacgatatggaagacgtaggagacaatccaggaattacaatcaaacaagaaatc
aagcaagaaatcaaacaagaaatcatagaagatgcttcaaaggaggaaccggaaaaggag
acacttccagaaaccgtaattttaaacacagagcttgagaaatactggaaagcagtccga
gacaatccgtcagatttcactggatggacttacctccttcaatatgtggaacaagagaat
aaaattgaggctgctagagaggcatacgatgcattttttggccactatccctattgttat
ggttactggaaaaagtatgctgacatggaaaagagacacggcaacctagagaaggcaaca
gaggtgtttgacaaaggagttgtggcgattccactgagcatagaattatggctgcattat
atcaacttttatatcggagagtataccagcacagaacagggagaatccgacatcaggaag
ttgtatgagagagctttatcagctgcgggtcatgatttccggtcagacaagctatgggac
tcctacatatcctgggagaaagatcaggagcgggtgaccgcgctgtacactcgactgcta
gccatcccaacacagctctacagccatcactttgacaacttcaaacagcatgtttacatg
cataatcctaaggagattttgagtctagatgacttcctgaagctccgacaagatgttgtt
gccaaatctacaaacatggatgaggaagatgaggatgcagtgcctgtaggagatgtagcc
cctcctggggaggaagatgttcccccgggcatggagacgggaggaggaaagggggatgaa
gcagaaattaacaaaatcaaagagagaatcattcagattcaggaggggacattcaagaag
acagaggaggaagtcagcaagcgatggaattatgaggaagctataaaaagaccctacttc
cacgtgaagccattggagagatcacaactgaaaaactggagggaatatttagactatgaa
atgcaaaatggcaactatacaagagttgttactctttttgaacgttgcatgattgccagt
gctctctatgaagatttctggatgaagtatgccaagtacatggaggaccacggagcagaa
ggggtccgcaatgtctatacccgagcctgtaaagtacatctgccaaagaaaccctatatc
cacttagcttgggcagcatttgaagagcgacagggcaaccactcggctgcctgggagatt
ctggctaatctagacaaggctgttcccggcctagtgatggtctccatgaggaggatcagt
ctcgagaggagaactggaagcaaagaggatgctgaggctctgttccaggaatacattgag
aacgctgcacagccagaaatcggctcctacttctcaatcaagtatgctcgctatctatta
aagatttgtggagaacgagagcaagccaaaaaaatattagcagaggctatcgaaaaagac
aagggtaacctgaagctgtacctccaactgatagacctggagtaccagaactttccagtt
gacgaggaacacatcacagaggtgttttctatgatccttgagtgtgaaaacttcccttta
gaaaccaaagttaagatgtcgcagagaaaattagaattccttgaagattttggaggcgaa
atttcaaaattaaaggaagcctatgacgaacatcaaaaactaatgaaagatttacatgct
gagcataaaaagagaccacatgagacatcaggacattcacatgaggagccttcggagaag
agagccaagaatgaatctgtacagaacggagccggggacatgagtgtgccacctgatggg
ggtcatgccaactacccctaccactggggaggataccagaactctggatataattatgcc
cctcaatggggaggacactacgggactggctatcaccatggttaccatcagtcctga
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