Mizuhopecten yessoensis (Yesso scallop): 110451318
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Entry
110451318 CDS
T05079
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110451318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110451318
Spliceosome [BR:
myi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110451318
Complex C
U5 SnRNP specific factors
110451318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
UPF0242
Motif
Other DBs
NCBI-GeneID:
110451318
NCBI-ProteinID:
XP_021354923
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSVQSLVSRKKKSFIGLPAPLGYVPGLGRGATGFTTRSDIGPARDIDDISDDRHAPPVKK
NKTDEEEEEDLNEANFDEFAGYGGSLCSKDPYDKDDEEADAIYEAVDKRMDEKRRERREI
KLKEELEKYRQERPKIQQQFSDLKRDLADVTVDDWLNLPEVGDARTKKQRNPRAEKFTPV
PDSMLARAAAGTGSSSSISGHDQKFGGHASTFGAITPLGGTTTSDIDMKKIGQARNTLMD
IKLTQVSDSVSGQTVMDPKGYLTDLQSMLPSHGGDINDVKKARLLLKSVRETNPKHPPGK
LPVLFTPALPLGKLPVLFSPALPLGKLPVLITPALPLGKLPVLFILTLLPVSFMVSEDAW
LDTVSFIVSEDAWLDTVSFMVSEDVWLDTVSFMGSEDPWLDTVSFMPGDQGKAIVAQAVR
HLPSSVRLWIKASDLENEMKPKKRVFRKALEHIPNSVKLWKMAVELEDEVDARIMLSRAV
ECCPTSVELWLAL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcagtctttggttagtcgaaagaaaaagagctttattggtctccctgctccg
cttggatatgttcctggcttagggagaggagctacaggattcaccaccagatctgatatt
ggtcctgcccgtgacatagatgatatatcagatgatagacatgccccaccagtcaagaaa
aataaaactgacgaggaagaggaagaagatcttaatgaagctaattttgatgagtttgcc
ggttacggaggaagcttgtgttctaaagatccctatgacaaagatgacgaggaagcagac
gctatatacgaagctgtcgacaagaggatggacgaaaaaaggagggaaaggagggagata
aagttgaaagaagaacttgaaaaatatcgtcaagagaggcctaaaattcaacaacagttc
tccgacttaaagagagatttagcagatgtaacggtggatgactggctgaatctacccgaa
gtaggggatgccagaacaaagaaacagagaaacccacgagctgagaaatttactcccgta
ccagacagcatgctagccagagcagcagccggtactggttcaagtagttccatttctggt
catgaccagaaatttggtggtcatgcgtcgacttttggggccatcacacctctaggtggg
acaaccacttctgatattgacatgaagaagattgggcaggcgagaaacacactcatggac
atcaagcttactcaggtgtcggactcggtgagtggccagacggtgatggatcccaagggc
tacctgactgacctccagtccatgttacctagtcatgggggtgacatcaatgatgtaaag
aaagccaggttgctgttgaaatctgtgagggaaacaaatccaaaacatcccccaggtaag
ttacctgtcctgtttacccctgccctacccctaggcaagttacctgtcctgttttcccct
gccctacccctaggcaagttacctgtcctgattacccctgccctacccctaggcaagtta
cctgtcctgtttatcctcaccctactcccagtcagttttatggtaagtgaggatgcctgg
ctggacacagtcagttttattgtaagtgaggacgcctggctggacacagtcagttttatg
gtaagtgaggacgtctggctggacacagtcagttttatgggaagtgaggacccctggctg
gacacagtcagttttatgccgggagatcaggggaaggctattgtggcccaagctgtaaga
catttaccatcatctgtcagactatggataaaggcatctgatctggagaatgaaatgaaa
ccaaagaaacgtgtcttcaggaaagcgcttgagcacatcccaaactcagtcaaactgtgg
aagatggccgtggagcttgaggatgaagtggatgcgcggattatgttgagtcgagctgta
gagtgctgtcctaccagtgtggagctctggttagcactg
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