Mizuhopecten yessoensis (Yesso scallop): 110451511
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Entry
110451511 CDS
T05079
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110451511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myi03400
]
110451511
Enzymes [BR:
myi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110451511
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
110451511
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
110451511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
Cdd1
NTP_transf_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
110451511
NCBI-ProteinID:
XP_021355248
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MSKRKAPTSDNVNSEFCDFLMELANYEKNVNRAMHKYNVYRKAAGVLAKHPTRITTGNEA
KKLDGIGDKIGKKIDEFVKTGKLVKLEKIRADDTSVAINALTKVTGIGPAAAQKLVQEGI
MSVEDLRKHTDKLNHHQQIGLKYYEDFEKRIPRHEVIQLRDAAVKEINTLDSEYMCEVCG
SFRRGASSSGDIDILLTHPSFTSESGKKPKVLAQVVEKLEASGLVTDRLSLGDVKFMGVC
QLGDTDSQKDRAFQRIDIRLIPNDQYFCALIYFTGSDQFNKGMRAHALEQGFTLNEYCLR
PVGSTGTPGEPLPVSSEEDIFDYLGMEFKKPAERNL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagctcccacatctgataatgtcaattcggaattctgcgacttttta
atggagttggccaactatgaaaaaaatgtgaatcgtgcaatgcacaaatacaatgtctat
agaaaagcagcaggagttctggccaaacatccgacacgaatcaccacagggaatgaggcc
aaaaagcttgatggaattggagataaaatcggaaaaaaaattgatgaatttgtcaagaca
ggaaaactagtaaagctagaaaagatacgagccgatgacaccagtgtggccattaacgcc
ttgactaaagtgactggtatagggcctgctgcagcccagaaacttgtacaggagggcatt
atgtctgtggaagatctcaggaagcatactgataaactcaaccatcaccagcagattgga
ctcaaatattatgaagactttgaaaaaagaattccgagacatgaagtcattcaactaagg
gatgctgctgtgaaggagataaatacactggacagtgaatacatgtgtgaagtgtgcggc
agtttccgtcgaggtgcttcttccagtggtgacatagatattttgttgactcatccctcg
ttcacttccgagtcaggcaaaaagcccaaggtgctggcccaagtggtagagaagctggag
gccagtggactggtcaccgacaggctctcactgggagatgtcaagttcatgggtgtgtgt
cagctgggagatactgacagccagaaagaccgagctttccagcgtattgatattaggttg
atacccaacgaccagtacttctgtgccctgatctacttcactggcagtgaccagtttaac
aagggcatgcgggcacatgcattggaacagggcttcactctcaatgagtactgtttaagg
ccagttggtagtacaggcacaccaggagagccactcccggtatcctctgaggaggacatc
tttgattaccttgggatggagtttaaaaaaccagcagaaagaaatctgtag
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