Mizuhopecten yessoensis (Yesso scallop): 110451571
Help
Entry
110451571 CDS
T05079
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110451571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110451571
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110451571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
FAD_binding_7
DNA_photolyase
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
Motif
Other DBs
NCBI-GeneID:
110451571
NCBI-ProteinID:
XP_021355346
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MAQTGSTQTTGVLPPEQHGYIPDKLKKAEKRIEAHPYDTEAWSVLIRDAQMKTIEVARQV
YERLVAQFANAGKYWRIYIEQELKAKNYERVEKLFQRCLVKVLSIDLWKLYLTYIKDTKG
SLPSYREKMAQAYDFALDKMGMDIMSYQLWVDYINFLKSVDAVGSYAENQRITAVRKVYQ
RGVVNPMINIEALWKDYCAYENNINPLIAKKMTEDRGRDYMNARRVAKEYEAVTRGLNKS
LPSIPPSNSPEEAQQVELWKKYIAWEKGNPLRTEDHALITRRVMFAYEQSLLCLGHHPDI
WYEAASYLEESSKILTEKGDQNAGKMFADEAAAVYERAITTLMKNNMLVYFAYADFEESR
MKYEKVHSIYKRNLNVQDVNPTLSYIQYMKFARRAEGIKSARSVFKMGREDNRTKYQVFV
AAALMEYYCSKEKNVALKIFELGLKKYGECPEYVLCYMEFMSHLNEDNNTRVLYERVLSS
GQIPPQKSIEIWSRFLAFESEVGDLACIQKVEKRRAQAIEKVQEFEGKDTALLIDRYKYL
DLYPCTTSELKAVGYYDLARQQVVQLPSNSVTKVVMEEEEGKKAPEYPKPDIEQMLPFKP
RMIIPNGSHIVEGGVFPPPPSAANLMTQLPPPECFHGPFVVMDAFIEHMKKLMLPDLPLP
QENGVDSKPDIGTQFSIDLAMGRKRKITEGEESDEERKQILHWFRKGLRLHDNPALRDAL
KGSSTYRCVYVLDPWFAGSSQVGINKWRFLLQCLEDLDCSLRKLNSKLFVVRGQPTNVFP
RLFKEWNITTLSFEEDPEPFGKERDAAIKALANEAGVETIVRTSHTLYDLQRIINQNNGM
SPLTYKRFQMILSKMDPPEQPVETINAAYLGKCRTPLTDEHDEHYGVPTLEELGFDTEGL
KPAELRGGEMEALSRLERHLERKAWVASFEKPKMTAQSLFPSQTALSPYLRFGCLAPRLF
YWKLAELFRKVKKQSDPPLSLHGQLLWREFFYTAATNNPNFDRMKDNPICVKVPWDHNPE
GLAKWAEGMTGYPWIDAIMRQLKQTGWIHHLARYSVACFLTRGDLWISWEEGMKVFDELL
LDADWSVNAGMWMWLSCSSFFQQFFHCYCPVGFGKRADPTGDFIRSYVPELKNYPSKYIF
EPWNAPPSVQKAAKCVVGKDYPLPIIDHGDASKVNMERMKQVYQLLAQRASAVSSIPKHT
DYLTHKTTMALTGATSGNHPTRVPLSCNAADQQTNNDGTDQTMSTSFAVYSSAS
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacaggatcgactcaaactaccggggttttaccccccgagcaacatggttac
atccctgacaaattgaagaaagcagaaaagcggatagaggcccatccatacgacacggaa
gcatggagtgttctcatcagggatgcacagatgaagaccatagaagttgcgagacaggtg
tacgagcgacttgtagcacaatttgccaacgctgggaagtactggaggatttacatagaa
caggagctgaaagccaaaaattatgaacgagttgaaaagctgttccagcgctgtttagtg
aaggttttgagtatagacctgtggaagctttacctgacctatataaaggacactaaagga
tccctaccgtcctacagggaaaaaatggcacaggcctacgactttgcactggacaagatg
gggatggacatcatgtcataccagctatgggtagattatatcaactttctcaaatcagtg
gatgctgttggatcatatgcagagaaccagcgcatcacagctgtgaggaaggtgtaccag
cgaggtgtggtcaacccaatgatcaacatagaggccctttggaaggactactgtgcatac
gaaaataacataaatccactgattgcgaaaaagatgacagaagatcgaggaagagattac
atgaatgcccgaagagttgccaaggagtacgaagctgtgactcgaggactcaacaaaagc
cttccctccattcctccatccaactcaccagaggaggcacaacaggttgagctgtggaaa
aagtacatagcctgggagaaaggcaacccgctaaggacagaagatcatgctctcatcacg
aggcgagtgatgtttgcctatgagcagagcttgctgtgtctagggcatcacccagacatc
tggtacgaggcagcctcctacctagaggaatccagtaaaatccttacagagaaaggagat
cagaatgcagggaagatgtttgctgatgaggccgcagcagtgtatgagcgggccatcaca
accctcatgaaaaacaatatgttggtgtactttgcatatgctgattttgaggagagtcgt
atgaaatatgaaaaagtccatagcatatataaaaggaatctgaatgtccaagatgtaaat
ccaactctgtcatatatccagtacatgaagtttgcccgcagagctgaaggtatcaagtca
gctcgatctgtgttcaaaatgggacgcgaggacaaccgcaccaagtatcaggtcttcgtc
gccgcagccctcatggaatactactgcagtaaggaaaagaatgttgctctgaagatattt
gagttagggttaaagaagtatggtgaatgtcccgagtatgtcctgtgttatatggagttc
atgtctcacctgaatgaggataacaatacaagggtcctgtatgaaagagtgctgtcatct
ggtcaaattccaccacagaagtccattgaaatttggagtagattcctggcatttgaatct
gaagttggagatctggcctgtatacagaaagttgaaaagcgaagagctcaggccattgaa
aaggtgcaagagtttgaaggaaaggacacggctttattgatagatcggtacaaatacctt
gacctgtatccttgtacaacaagtgaactgaaggctgtcggatattacgacttggctagg
cagcaggtggtccagctaccttccaacagtgtgaccaaggtggtgatggaagaggaggag
ggcaagaaggcaccggaataccctaaacctgatatcgaacagatgttgcccttcaaaccc
aggatgatcatacctaatggatctcacattgtggaaggaggtgttttcccccctccccct
tcagctgccaatctgatgacgcagcttcctcctccagaatgtttccacggaccatttgta
gtcatggatgctttcatagagcatatgaagaaactgatgttacctgatctgcctcttcca
caagagaatggtgttgacagcaaaccagacatcggtactcagttctccatagacttggct
atgggcaggaaacgcaaaatcacagaaggggaagaaagtgacgaagaaagaaagcaaata
ttacactggtttcgcaagggcttacgattgcacgacaacccagctctgagagatgctctg
aaaggaagttccacttatcgctgtgtatatgtcctggacccttggttcgctggttcatca
caagttggaatcaacaaatggaggttcctgttacaatgtttggaagacttggactgctcg
ttgaggaaacttaactcaaaactgtttgttgtgcggggtcagccaacaaatgtatttcca
cgcctgttcaaggagtggaacatcacaaccttgtcgttcgaggaagaccccgagccattt
gggaaggagcgggatgccgccattaaagctctagctaatgaagcaggtgtggagacaatc
gttcgcacatcccacacgctgtacgacctacagaggattataaaccaaaacaatggaatg
tcgcctctgacgtacaagcggttccaaatgatcctgtccaagatggaccctccagaacag
cctgtggaaacgatcaacgcagcttatctgggaaaatgtaggacacctcttaccgatgag
catgatgaacactatggagtacccacccttgaagaactgggatttgacacagagggctta
aaaccagcagaacttcggggaggggaaatggaggccttgtctcgactggaacggcactta
gaaagaaaggcttgggtagccagttttgagaagccaaagatgacagcccagtcattattc
cccagccaaacagctctcagtccatacctgcggtttggctgtttggcgccccgcctattt
tactggaaactagcagagctgttcagaaaggtgaaaaagcaatcggatccccctttgtcg
ctgcatgggcagctattatggcgggaattcttttacaccgcagccaccaataatccaaac
tttgatcggatgaaggataatcctatatgtgtcaaggtcccatgggatcacaacccagaa
ggcctggccaaatgggcagagggtatgacgggttatccatggattgatgcaataatgaga
cagttgaagcagacaggctggatccatcacctagccagatattcagtggcatgtttcctt
acgcgcggggatttatggatctcctgggaggagggcatgaaggtatttgatgaactactg
ctggatgctgactggagtgtaaatgctgggatgtggatgtggctatcctgcagctccttc
tttcagcagtttttccactgttactgtccggtgggctttggaaagcgggcagaccctact
ggagacttcatcagatcctacgtgcctgaactgaagaactacccttctaagtatatcttt
gagccctggaatgccccgccgtccgtccaaaaggcagccaaatgtgtggtagggaaggac
tacccccttcctattattgatcatggtgatgccagcaaagttaatatggaacgcatgaag
caggtgtatcaactcttagctcaacgggcatctgcagtgtcatctattccaaaacacact
gactacctgacacacaagacaacaatggcgctcacaggtgccacgtctggaaaccaccca
acccgagtcccactgagctgtaacgctgctgaccagcagacaaacaacgacggtactgat
caaaccatgagcaccagtttcgctgtgtactcaagtgcttcttga
DBGET
integrated database retrieval system
