Mizuhopecten yessoensis (Yesso scallop): 110451713
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Entry
110451713 CDS
T05079
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110451713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110451713
Spliceosome [BR:
myi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110451713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
Beta-prop_SPT8
Ge1_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
MIOS_WD40
WD_LRWD1
WD40_like
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
110451713
NCBI-ProteinID:
XP_021355532
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSDDEEEAVLHFRPNKPVLYGSLEDKERQRLANVKTSGSLATDAIEAGKAAGNILISDGS
RYEISDHVDQSDLLAELERRKKARHIHVSTDDSEVKASLRQLDEPICLFGEGPADRRERL
KKLLAQIGEDSLKQKKEEEIQLKKKKAEENITWYHEGSKSLKEARYWLAQYSIPRAKTRL
GAQKQTKFIPTTQKNAKTQDIQKRIGAVSNECSQIGDNRPLSYCHFSPNGKILAVSSWSG
LCKLWSIPDCGLIRQLRGHNGNVGAIVFHPQATVSLDDKACCMASCGQDGSVKLWNLVSE
EPMADIEGHAPYRVSRLAYHPSGRFLGTCCFDNSWRLWDLEAQEEILHQEGHSKPVYDIA
FQNDGALAVTGGMDGFGRVWDLRTGRCIMFMEGHLKSVLGVDFSPDGYHIATGSEDNTAK
IWDLRQHKCIYTIPAHTNLVSKVKFQPDQSSYLVTSSYDCTSKIWAHPTWAPLKTLAGHE
GKVMAVDISPDRKYIASVSYDRTFKLWATDSQGGL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaggaggaagctgttctccactttcgaccaaacaaaccagtgctctat
ggaagtttggaagacaaagaacggcagcgattggctaatgtcaagacttcaggatctctg
gccaccgacgcgattgaagcaggaaaagcagcaggaaacattcttataagtgatgggtcc
agatatgagattagtgatcatgtagaccaatcagatctgttggcagagctagagaggagg
aaaaaggcacgtcacatccatgtgtctacagatgattctgaagtgaaggccagtctacga
cagctggacgagcccatatgcttatttggtgagggccctgctgacagaagagagagactt
aaaaagttactggcacagataggtgaggattctctgaaacaaaagaaggaagaagagata
caactcaagaagaaaaaagcagaggaaaatataacctggtaccatgaaggatctaagagt
ttaaaagaggcccgctactggctagctcagtattctataccaagggccaagaccagattg
ggagctcagaagcagacaaaattcattcctaccacacaaaagaatgctaagacacaggac
atacagaaacgtattggggctgtatccaatgaatgcagtcagattggagacaaccgaccc
ctctcatactgccacttcagtcctaatggtaaaatactggcagtgtcctcatggtctggt
ctgtgtaagctgtggtcaattcctgactgtgggctgattagacaactcagaggacacaat
ggaaacgtaggagcaatagtcttccatcctcaggccactgtctcactagatgacaaagcc
tgctgtatggcttcatgtggtcaagacggatcggtcaagctctggaatcttgtcagtgag
gagcctatggcagacatagagggacatgccccctatagagtatcccgcctggcctatcat
ccctcaggacgctttcttggaacctgctgttttgacaattcctggagactatgggactta
gaggctcaggaggagattctgcaccaggagggacacagtaaaccggtgtacgacatagcc
ttccagaatgatggggctctggctgtcacagggggtatggatggatttggacgagtctgg
gatctacgcactggacgctgtatcatgttcatggaaggtcatctaaaaagtgtgctagga
gtggacttctctccagacggatatcacattgcaactggcagtgaggacaacacagctaag
atctgggatctacggcagcacaagtgtatctataccatccccgctcacactaaccttgtc
tccaaggtcaaattccaaccggatcagtccagctacctggtgacatcttcatatgactgt
acatcaaagatctgggcccatccaacctgggcaccactgaagaccctggcaggtcatgag
ggtaaggtaatggcagtcgacatctcacccgaccgcaagtacatagcctcagtgtcatat
gacagaacattcaaattgtgggcaacagacagccagggaggactctag
DBGET
integrated database retrieval system
