Mizuhopecten yessoensis (Yesso scallop): 110451881
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Entry
110451881 CDS
T05079
Name
(RefSeq) ATP-dependent RNA helicase A-like protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110451881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110451881
03012 Translation factors [BR:
myi03012
]
110451881
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110451881
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110451881
Translation factors [BR:
myi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110451881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
110451881
NCBI-ProteinID:
XP_021355773
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MATLTLYKVYGRTHPVQEYYLEDCIQMLNFIPPPSDKRKKRDKDEILDDGEQEALIKYIK
SLNIPGAILIFLPGWNLIFALHKHLEMHSEFGGRQYCLLPLHSQIPRDEQRRVFEPVPDG
VTKIILSTNIAETSVTINDVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRRGRA
GRVRAGFAFHLCSRSRYEKLDQHTTPEIFRTPLHELALSIKLLRLGPIGPFMAKAVEPPP
IDAVIEAEALLKEMRALDSNDELTPLGKILAKLPIEPRLGKMIIYGCLFYCGDAVCTIAA
STTFPEPFITPTDRRRLGWVHKSLAGNRCSDHVALLNALNLWEEARMGGEQNEIYFCEQK
SLSMPTLRMTSEAKCQLRDILINSGFPEECLLPQVYNYNGPDSNLDMVVTLLCMGLYPNV
CFHKDKRKVLTTESRAALVHKSSVNCNNFECRFPSPYFIFGEKIRTRAVSCKQMTMVSPL
QLLLFASRSVTYHEDLITLDNW
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccacactcaccctgtacaaggtgtatggccgcactcatcctgtacaagaatattac
ctggaagactgcattcagatgctgaacttcattccgcccccttcagataaacgcaagaaa
cgtgacaaggatgagattttggatgatggggaacaagaggcccttattaagtacatcaag
tcactgaacatccccggagctatcctcatctttctgccaggctggaatctcatttttgct
ctccacaaacacctggagatgcactctgaatttggaggccgtcagtactgtctgttacca
ctccactcccagatccctagagatgaacagaggagagtctttgaacctgtccctgatggt
gtcacaaagatcatactgtcgaccaacatagctgaaactagtgtcaccataaacgatgtt
gtctatgttatcgactcatgcaaagctaagatgaagctgttcacatcccacaacaacatg
acaaactacgctacagtgtgggcatccaaaaccaacctcgagcagagacggggaagggca
ggtcgtgtgagggctggctttgcatttcatctttgtagtcgttcaagatacgaaaagttg
gatcagcataccaccccggagatcttcaggacaccccttcatgagttggccctgtctatc
aagctgctgcgcttgggtcccattggtccatttatggccaaggctgtagaaccgccccct
attgatgctgtcatagaagctgaggctctgctcaaagaaatgcgagctctagattccaat
gatgagctgactcctcttggtaaaatcctggccaaacttccaattgagccaaggctgggc
aagatgatcatctatggctgtctcttctactgtggagatgctgtatgtactatagcggcc
agtacaactttcccagagccgttcatcactcctacagaccgacgcagattgggttgggtc
cacaagtcccttgctggcaacaggtgtagtgaccatgtggcactccttaacgccttaaat
ctgtgggaggaggccaggatgggtggagaacagaatgagatctatttctgtgaacagaag
tctctgtctatgcctacactcagaatgacctcagaggcaaagtgtcagctgcgagatatc
ctcatcaactctggattcccagaggaatgtctactaccccaggtgtacaactataatgga
ccagacagcaaccttgatatggtggtcactctactgtgtatgggtctgtaccccaatgtc
tgcttccacaaggacaagaggaaggtactgaccacagagagtagggctgccctagtccac
aagtcctctgtcaactgtaacaactttgagtgcaggttcccgtctccctacttcatcttt
ggagaaaagatccggacacgagctgtgtcatgcaaacagatgacaatggtttcacctctc
cagctgctgttgtttgcttctcgctcagtcacctaccatgaagatctcataactctggac
aactggtaa
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