Mizuhopecten yessoensis (Yesso scallop): 110452053
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Entry
110452053 CDS
T05079
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03020
RNA polymerase
myi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110452053
09124 Replication and repair
03420 Nucleotide excision repair
110452053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110452053
03400 DNA repair and recombination proteins [BR:
myi03400
]
110452053
Enzymes [BR:
myi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110452053
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110452053
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110452053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110452053
NCBI-ProteinID:
XP_021356003
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYGQDEEMEDETDDITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDS
PQIDLQAEAQHTSGTIETPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYSA
PLYVDITKTVVKEGEDPIETTHQKTFIGKIPIMLRSTYCLLSGLTDRDLTELNECPLDPG
GYFIINGSEKVLIAQEKMATNTVYVFQQKDSKYAFKTEIRSCLEHSSRPTSTLWVNMMAK
GGGGAKKSAIGQRIIGILPYIKQEIPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEMVK
PSLDEAFVIQERNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETKKA
YFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRGMFRNLMKEVRMYSQKF
IDRGKDFNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFVSTLSHL
RRLNSPIGRDGKLARPRQLHNTQWGMVCPAETPEGGAVGLVKNLALMAYISVGSQPSPIL
EFLEEWSMENLEEVAPSSIQDATKIFVNGCWVGIHRDAEHLMNTLRKLRREMDIIVSEVS
MIRDIRDREIRIYTDAGRICRPLLIVDNQKLLLKQSHIKQLKQKEYNSYSWQDLVASGVV
EYIDPLEEESIMLAMTPDDLSEDKDVQYCSTYTHCEIHPAMILGVCASIIPFPDHNQSPR
NTYQSAMGKQAMGVYITNFHVRMDTLAHGLLYPQKPLVTTRSMEYLRFRELPAGINTVVA
IATYTGYNQEDSVILNASAIERGYFRSFFFRSYKDAESKKGLDQEELFEKPDRENVQGMR
PAIYDKLDEDGIISPGLRVSGDDVLIGKTMTLPPNDDELDATARRYSKRDASVFMRRSET
GIIDQVMVTINQEGYKFCKIRVRTVKTPQIGDKFASRHGQKGTCGITYRQEDMPFTCEGI
TPDIIINPHAIPSRMTIGHLFECLQSKVAANKGEIGDATPFNDAVNVQKVSNLLHQYGYH
QRGNEILYNGFTGRKLNAQVFLGPTYYQRLKHMVDDKIHSRARGPLQILNRQPMEGRARD
GGLRFGEMERDCQIAHGAAQFLRERLFEASDPYRVHLCNFCGIIAIANLRNQTFECRGCK
NKTQISQIRIPYACKLLFQELMSMSIAPRIMVLAQ
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatggacaagatgaagagatggaggacgagactgatgatatcactcccgatctctgg
caggaagcttgctggattgtcatcagctcatattttgatgagaagggattggtaaggcaa
cagctggattcctttgatgagttcatccagatgtctgtacagcgtattgtggaagactcg
ccgcagatagacctacaggctgaggcacagcacacgtcaggcactatagaaacccctcca
agatatcttctaaagtttgaacagatttatttatcaaagccaactcattgggaaaaagat
ggtgcgccaagtcccatgatgcctaatgaagcgagactccgaaatctaacgtactctgcc
cctctgtatgtggacatcactaaaactgtggtgaaggagggggaggaccccattgaaacc
actcaccaaaagacatttattgggaaaatacccatcatgttacgttctacatactgttta
ctgagtgggctcacagatcgtgatttgacagagttaaacgaatgtccgctcgatccagga
ggatatttcatcatcaatggatcagaaaaagtactcattgctcaagagaaaatggcaaca
aacacagtgtatgtatttcaacagaaagattcaaagtatgcttttaagacagaaattcgg
tcgtgtttggagcattcttctagacctacgagtacactgtgggtgaacatgatggctaaa
ggaggagggggagccaagaagagtgccataggacagagaatcatcggtattctgccgtac
attaaacaggagattcctatcatcattgtgttccgagccctgggctttgtgtcagacaga
gacattctggaacacattatctacgactttgatgacccagagatgatggaaatggtgaag
ccctctcttgatgaggcatttgtgatacaggagcgaaatgtggcactcaacttcataggg
tctcgtggtgctcggccaggtgtgacaaaggaaaagagaatcaaatatgcacgggaaatt
ctgcaaaaagaaatgttacctcacgttggtgtcagtgacttctgtgagaccaagaaagct
tacttcctggggtacatggtacatcgcctgcttctggctgccctgggtcggcgtgaggtg
gacgacagagatcactacggcaacaagagacttgacttggctggacccctacttgctttc
ttgttcagaggaatgttcagaaatctaatgaaggaggtaagaatgtactcgcagaagttc
atcgacagagggaaggatttcaacctagagctagcaatcaagactcgaatcattacagac
ggtctcaagtactctctggctacaggaaactggggtgaccaaaagaaggctcatcaggct
agggctggagtatctcaggtgttaaatagactgacatttgtgtcaaccttgtcacatttg
cggagactgaactctcccatcggccgagacggtaaattggcccgtccacgacagctacac
aacacacagtggggaatggtgtgtcctgctgaaactcctgagggaggtgctgtaggcctg
gtgaagaaccttgccctgatggcttacatctctgtcggctctcagccctcacccatcctt
gagttcttggaggagtggagtatggaaaacctggaggaggttgccccatcatctatacag
gatgctacgaaaatatttgtgaatggttgctgggtggggatacacagagatgctgagcac
ttgatgaacacactgagaaaactgcgcagagagatggacatcattgtgtccgaggtgtcc
atgatcagagatatccgcgacagagaaatccggatttatacagatgctggaaggatctgt
cgacccttacttattgttgacaatcagaaacttctgttaaaacagagtcacataaaacag
cttaaacagaaggaatacaacagttacagttggcaggatctggtggctagtggggtcgtt
gagtacatcgaccccctggaggaggagtccattatgttggctatgactcctgatgacctt
tctgaggacaaggacgttcagtactgttctacctatactcattgtgagatccatccggcc
atgatactcggcgtgtgtgcctccatcatcccattccctgatcacaaccagtctccacgt
aacacctaccaatctgctatgggtaaacaggccatgggtgtgtatatcaccaacttccac
gtgaggatggacactctggcccacggactcctgtacccacagaaacctctagtcactact
cgctccatggagtatctccgcttcagggagcttccagcaggtatcaacacagttgtcgcc
attgcgacctatacaggatacaatcaggaggattccgtcattctgaacgcttctgctatt
gaacgaggctatttcagatcctttttcttccgatcctacaaggatgcagagtcaaagaaa
ggactagaccaggaggagctatttgaaaagcccgacagagaaaacgttcaaggcatgagg
ccagccatctatgacaagctagatgaagatggtatcatatctcctggacttcgagtatcc
ggagatgacgtactgattggcaagaccatgaccttgccacccaatgatgacgagcttgat
gccactgcaagaagatattccaagcgagatgccagtgtgttcatgagaaggagtgagact
ggaattattgatcaggtgatggtcactattaaccaggaaggctacaagttctgtaagatc
cgtgtgcgaacggtaaagacacctcagattggagataagtttgccagtcgacacggtcag
aaaggaacttgtggaatcacataccgacaggaggacatgccattcacatgtgaaggaatc
acccctgacatcattatcaacccccatgctatccccagtagaatgaccattggccatttg
ttcgaatgtttacaaagcaaagtagcggccaacaagggggagataggagacgccacgccc
ttcaacgacgctgtcaacgtacagaaagtgtcgaacctgctccaccagtacgggtatcac
cagcgtggaaacgagattttgtacaatggtttcactgggaggaagctgaatgcccaagtg
ttccttggaccgacctactaccagcgtttgaagcatatggtggatgacaagattcattcc
cgagcccgtggtccccttcagattctcaataggcagcctatggagggcagagccagggat
ggtggtttgcgtttcggagaaatggagcgtgattgtcaaattgcccacggagctgcacag
ttcctgcgtgagcgtctgtttgaggcgtcggatccctacagggtacatttgtgtaacttc
tgtggaataattgccatagctaatctacgtaaccagacgtttgagtgccgaggatgtaag
aacaaaacacagatctcacagatccgtattccgtatgcctgcaagcttctgttccaggag
ctcatgtccatgagcattgctccgcgtatcatggttttggcacaatag
DBGET
integrated database retrieval system
