KEGG   Mizuhopecten yessoensis (Yesso scallop): 110452115
Entry
110452115         CDS       T05079                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03030  DNA replication
myi03410  Base excision repair
myi03420  Nucleotide excision repair
myi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110452115
   03410 Base excision repair
    110452115
   03420 Nucleotide excision repair
    110452115
   03430 Mismatch repair
    110452115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:myi03032]
    110452115
   03036 Chromosome and associated proteins [BR:myi03036]
    110452115
   03400 DNA repair and recombination proteins [BR:myi03400]
    110452115
DNA replication proteins [BR:myi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110452115
  DNA Replication Termination Factors
   ELG1-RFC complex
    110452115
Chromosome and associated proteins [BR:myi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110452115
DNA repair and recombination proteins [BR:myi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110452115
  Check point factors
   HRAD17(Rad24)-RFC complex
    110452115
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_assoc_2 AAA_22 AAA_11 AAA_16 Gp44_lid AAA_24 AAA_30 Mg_chelatase ResIII SLFN-g3_helicase AAA_19 RuvB_N DNAX_ATPase_lid AAA_5 AAA_7 DUF815 AAA_28 bpMoxR
Other DBs
NCBI-GeneID: 110452115
NCBI-ProteinID: XP_021356122
LinkDB
Position
Unknown
AA seq 361 aa
MHAFLKGGSAALERAKEKSASSSGDKEEPAKKTRQVPWVEKYRPRSVDDVAYQDEVVAVL
KKSLQCSDLPNLLFYGPPGTGKTSTILAAARDLFGPEMFRNRVLELNASDERGISVVRDK
VKRFSQHTASGTRPDGKPCPPFKIIILDEADSMTSPAQAALRRTMEKETKTTRFCLICNY
VSRIIEPIASRCAKFRFKPLSEETLTKRLLGICEKENVSCDDEGIKALLRTSEGDLRKAI
TYLQSASRLKVEETITEADINEIAGVVPDEVLDDLIMICSSDSYEKLDTGLRGLINDGYS
ASQVITQLHEKLIEKEDLTDKQKAVIFEKLAVVDKCLIDGADEYLQLMALFTTIMHQICH
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcatgcctttttgaaaggaggtagcgctgctttagaaagagccaaagagaaatcagct
tcttcaagtggtgataaagaggaaccagcgaaaaagaccagacaggtcccatgggttgaa
aaatatcgacctcgaagcgtggatgatgttgcttaccaagatgaagtagtggcagttctg
aaaaaatctttgcagtgttctgatctgccgaacctcctgttctacggtccacctggtaca
ggtaaaacctccaccatccttgctgcggccagagatttgtttgggccagaaatgttcagg
aatcgagttttagagttaaacgcttctgatgagcgaggaatcagcgtggtacgagataaa
gtgaagagattttcacagcacaccgccagtggaacaagaccggatggcaaaccttgtccg
ccattcaaaatcatcattctggatgaagctgattcaatgacctctcccgcacaggctgca
ctacgaagaacgatggagaaggaaaccaaaacgacccggttttgcctgatttgtaattat
gtctctcgtatcatagaacccatagcttcaaggtgtgccaagttccgttttaaaccattg
tcggaggaaacgctgacaaagaggttactgggaatctgtgaaaaagaaaacgtcagctgt
gatgatgagggaatcaaagctttactgaggacttctgaaggagacctgaggaaggccatt
acatatttacagagtgcttctagactcaaggtagaggaaaccattacagaagctgacatc
aatgagatagcaggggttgttccagatgaggtcttagatgacttgattatgatttgtagc
tcagactcgtatgagaaactggacaccggtttacgaggtctgattaatgacggttactca
gcctcacaagtcattacacagttgcacgagaagttgatagaaaaagaagaccttacagat
aagcagaaagcagtcatctttgaaaagcttgcggttgtggacaagtgtttgatagatggg
gcagatgagtacctccagttaatggcactatttacgacgatcatgcaccaaatttgccac
ggatga

DBGET integrated database retrieval system