Mizuhopecten yessoensis (Yesso scallop): 110452144
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Entry
110452144 CDS
T05079
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
myi04990
]
110452144
Domain-containing proteins not elsewhere classified [BR:
myi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110452144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
Ig_3
TSP_1
Ig_2
CILP_5th
I-set
TSP1_spondin
CILP_8th
CarboxypepD_reg
ig
V-set
CILP
TSP1_CCN
CarbopepD_reg_2
TSP1_ADAMTS
TTR_TEN1-4
Motif
Other DBs
NCBI-GeneID:
110452144
NCBI-ProteinID:
XP_021356179
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MEKEQYIVSPGRIGFQSLDESCDSGLADGESTTVVKGGLNTKKLVLIVGSIIAVGVIAAV
GVGLGVAILNKDDLPPGTGTTPSPSENDPIDGEWTYWDKWSDCSLTCGGGTQVRRRTCSA
PPPLFGGKVCPGKDILTRECSKWNCPDCGRICPNGGTLSKDCDVCLCQQEVLFGTVRDTN
NIPLHGVDVYLSYKQWEPVATTNYWGEYRVQSLCVSATKLLFRKEGFLQNETMPVSLNTT
HHQAHSFLRKYEKPRITKQPVNKYRFVGQSSTLCCQAKGFPTLMKYSWYKDGKQISQDLS
SGTLRLPNLQKMDEGIYSCMAESEAGIVKSESVLVNVKDVSKDTCDKYPVSKKERLPAGC
FATVNGVQQNEVDIGQCVQLPCITSTDIDNGTCEEWWPSKCCNVETVDRIEVTCPDFTYS
LNKIETCGCSLGTTVTRVTAFAYGIRNGTRVPFQRGKVFVDGGKLTYSSSSGMLSFSIPF
EKTEVTLSLQEDIKGEFLDSIKTLKLTPGKMMTVNVILPLRPIPVSFNTRMGLSIPLNNV
DGADRVATVSIPSDSMLDKDGNKYEGAANAFVNFMDPRKLEDLQAADGSFTTLDDNGNAA
PLETFGMFRMHFEDNSGSELSLSGPITTQMDASLFNISQDKDGNPDLSMWHLDPNTGKWV
EQGAFRYVQTQGKRRLLAKTLIEGTIDPSSIPKIDLMYTSVTSKTISRPIYSNCDKNRII
GYTYSRYIQKNPPAPKDDACYVRVRTYTDFTLTDYLKGVTVTAITKELNGPRFKGISTSS
TDENGIACVEIFCNSIVYLYTTFGTQMYATDQHSLPDNYPFKNIQNLTQVQFTSIDPYIN
QPRSDKMYSPAYDFKKKPQCEKPSFSDGLFQFAPIKKENRLETSLRINVLDQRLAWYTRP
VEDPLHKSCFIKLNIKSNIHSFDIISKSFIQDDPSQRDEYGTYFTSPYWDETTDRRYSKA
ACIEFRCSGLVVDGATKTQNVPTLVYIYVASDEGARCTIDSSSVAVNQTGMGNSYVFLAN
PRDQYGQQYGVFIRNQPADDVRQMCESGTTSGSVSSTMKPDKNPAFQLTCI
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaacagtacatagtgagtccaggacgaattgggtttcaatcactcgatgag
tcttgtgattcaggcttagctgacggcgaatcaactacggtagtaaagggaggactcaac
accaaaaagttggtgctcatcgtcggatctataattgccgttggggttattgcagccgtc
ggtgtcgggttaggcgtcgccatcctcaacaaagatgacttgccccctggaacaggcacc
acgccatcaccatcagaaaacgaccctattgacggtgaatggacgtactgggacaagtgg
tctgactgttcattaacttgtggaggaggaacacaagttaggagacgaacatgtagtgcc
cctcctccgctctttggaggaaaggtctgtccggggaaagatattctgactcgggaatgc
tcgaaatggaattgcccagattgtggaagaatatgtcctaatggaggaacactttccaaa
gactgtgacgtgtgtctctgtcaacaagaagttttgttcgggacagttcgggataccaat
aacataccccttcatggcgtggatgtgtatttgtcctacaaacaatgggaacccgtagct
acaacaaattattggggagagtacagggtacaaagtctctgtgtctctgccactaaactg
ctgttcaggaaagaaggattcctgcaaaacgaaacgatgcccgtttcgttgaacacaact
caccatcaagctcatagtttcctacggaaatacgagaaaccacggattacaaaacagccc
gtcaataagtacagatttgttggacagagctcaacactttgttgtcaggcaaaaggcttc
ccaacgttaatgaaatactcatggtataaagatggaaaacaaatatcacaagacttgagc
tctggaacactgaggttacctaacctacaaaaaatggacgaggggatttactcatgtatg
gcagagtctgaagctggaatcgtcaaatcagaaagcgtgctggtcaatgtgaaagatgtt
tcaaaggacacgtgtgacaagtatcccgtatcaaagaaagagagattacctgctggatgt
tttgctacagtcaacggtgttcagcaaaatgaagtagatatcggacaatgtgttcaacta
ccgtgcatcacatcgacagacattgataatgggacatgtgaagaatggtggccgtcaaaa
tgctgcaatgtcgaaacagttgatagaatcgaggttacatgcccagactttacgtattca
ttaaataaaatcgaaacatgtggttgcagtttgggaacaactgttacaagagtaacagca
tttgcctatggtattaggaatggaacacgtgtacctttccaaagagggaaagtatttgtt
gatggaggcaaactcacatattcaagttcatctggaatgctttctttcagtattcctttt
gaaaagacagaagttactctttcccttcaggaggacatcaagggagagttcctggactcg
attaagacattgaagttaactcctggaaaaatgatgaccgtgaacgttatattaccatta
cggccaatccctgtatcattcaataccagaatgggattaagcatccccctcaataatgta
gatggtgctgacagagtggcaacggtttctattccttcagactctatgttggataaagac
ggtaacaaatatgaaggtgcggctaatgcttttgttaacttcatggatccaagaaaactc
gaggatctgcaggccgctgacggaagtttcacgactttagatgacaacggaaatgcagca
cctcttgaaacattcggaatgtttcgtatgcattttgaggataactcaggtagtgaattg
tccctttctggaccaataactacacagatggatgctagtttgttcaatatatcacaagac
aaggatggaaatccggatttatcaatgtggcacctggatccaaacaccggaaaatgggta
gaacagggagcattccgatatgttcaaacccaggggaagcgtagattgttagcaaaaaca
ttgattgaaggaacgattgatcccagtagcatccctaaaatagatttgatgtatacgtca
gtaacatcgaaaacaataagccgtccgatctactctaattgtgataaaaaccgcataatt
ggttatacgtacagcagatatatacagaagaatccacccgcacctaaagacgatgcctgc
tatgtcagggttcgaacatacactgacttcacactcacagattatttgaaaggagtgact
gtaactgctattacaaaggaactgaacggtcctcgttttaaaggcatcagtacatcatca
actgatgaaaacggcattgcgtgcgtggaaatattctgcaactccattgtgtatctgtac
acgacgtttggaactcagatgtacgctactgatcagcacagccttcctgacaattatccg
ttcaagaacattcaaaatttaacacaagtacagttcacgtccatagacccgtacattaat
cagcctcgaagtgacaaaatgtacagccctgcttatgatttcaaaaagaaaccacaatgt
gaaaagccttccttttctgatggactttttcaatttgctccgatcaaaaaggaaaataga
ctagagacatctcttagaataaatgtccttgaccaaagactggcctggtatacaagacct
gttgaagatccactacataaatcatgcttcataaagttgaatattaagtcaaacattcac
agttttgacataatcagcaagagcttcatacaggatgacccctcacaacgtgatgagtat
ggaacttactttacatctccctactgggatgagaccacagatcgccggtactccaaagcg
gcatgtattgagttccgatgttccgggctggttgtggacggggcaacgaaaacacagaat
gtaccgacattggtgtacatctacgtggcgagcgacgaaggagcaaggtgcactatcgat
tccagttccgttgccgttaatcaaaccggaatgggaaatagctatgtatttttggctaac
ccgagagatcaatatggccagcaatatggagtttttatcagaaaccagccggctgatgac
gtcagacagatgtgtgaaagtgggacaacatccggtagtgtttcctctacgatgaaacct
gacaagaacccagctttccagttaacgtgcatataa
DBGET
integrated database retrieval system
