Mizuhopecten yessoensis (Yesso scallop): 110453132
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Entry
110453132 CDS
T05079
Name
(RefSeq) protein SMG5-like
KO
K11125
protein SMG5
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110453132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110453132
03032 DNA replication proteins [BR:
myi03032
]
110453132
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110453132
mRNA cycle factors
Common to processing body (P body) and stress granule
110453132
DNA replication proteins [BR:
myi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
110453132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
110453132
NCBI-ProteinID:
XP_021357648
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MKKTHESSNENKPDVDKAKRVYRAAVEAIKRLDEVLKQRKAYREVFTQDAVGLRNKLKEY
SERLMFYNPLEYGRKAEDVLWRKVFYQIIQLVKQNRKHVRPGSTLESAFRTHLASATGYY
NHLLFRLQYEFSLNLHGVLDFHLVPEQKTGHRKHFGHNSRRKDVNPIAQDWAMKACHRCL
LCLGDIARYQQDFDKGFSKSASERFYHQAIALCPDNGMPHNQLGTLSGSRYVHCEAAYHY
IRCMVCEKPFEGAEGNLQRLFEKNRKKFLELKQSTNHSLPLESQSFQDLKVFLIQFLHLL
SIFHDTSKNPDSSDLQDSCQATLQNFNLCMFHEPDIYSHDGLQHLDDDMVFKFVVMCMAT
IHLLQLRGSRQVTAATAFLLALFSHILNHVVIRLHAALDEKENPNILLHREFHQDVDEEM
EDFSDPEENGRISHRAHGQEAEEVPPSSQNHNNSSQYKRIGTENSIQQEKPEKSKSSRIK
SFKRRRRKRHNSDDSSDLSDVSDLSEGAEHLSDHFLSGDSEEEEEEFVGFFTNESDSDMS
DALMESQELEPGFAEASRSSANSNSHDPQTVFPGGVPEANNAIWINQAEKEKLAHLSSEL
YSSSASFLRQNVRLSPQNSRAYECDVAEFENCKDVIQGKKEVPVPPGFASSKEALHVAEI
TNKLANFVIETDTEASMAPTDSEQSGADVENDTETEDYSSTSGSGDRVETSHHQLKNTID
VVHNEGLLSTVKLMCDWMRCNSGVIMTCAQSSQSLWHRLSVLCNILPLETVLAEHDQCWM
EEVKGILCSIPSQDWHQIFPLREDINLAHFQPLAEAHSSLKINIKRKGHVSEMQECFLRV
GCIRQFGHFLSSLENLNFQYDEEQKIFVGPAQPSDTRENEKEAMKRIADEESRRNQLMRD
MAQLRLQAEVSQLEGSLDKHDQSSFPPYLIPDPQCLCDCLNMVKQLSQSGKGILVIPISV
IDTLDVLKKESGRAREAIRWLEAEFRKGNRYIRAQKSNEKLQDNTPKLLKKDKAMWCLFE
ILNCARYLALQGGELNGGNMVAVLTAKELDRAILPPLVKKMLTAQEGVSMASVSSFLNRW
KDVPKNKG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacacacgaaagcagtaacgaaaataaaccggacgtcgataaagccaaaagg
gtgtatagggctgctgtagaggcgatcaagcgtcttgatgaagtattgaagcagagaaag
gcctaccgggaggtgtttactcaagatgctgttgggttacgtaataaattaaaagaatac
agtgagagactgatgttctacaacccccttgagtatgggaggaaagctgaagatgttcta
tggcggaaagtcttctatcagattatacagctcgtaaaacaaaaccgaaagcatgtacgg
cctgggagtacattggagtcggcattccgaactcacctggcgtcggcaacaggttactac
aatcacctcctcttcagacttcagtacgaattctcgctcaatctccatggtgtcctcgac
ttccatctggtgccagaacagaagacaggccacaggaagcattttggacataacagtagg
agaaaggatgtgaatccgatcgcccaggactgggcgatgaaggcctgccatcgctgtctt
ttgtgtctaggagacattgcacgttaccaacaagactttgataaagggttcagtaaatca
gcttcagaacgtttctaccatcaggccatagctttgtgtccagataatggtatgccacac
aaccagcttggaactctgagtgggtcacgctatgtccactgtgaggctgcctaccactac
atacgctgtatggtgtgtgaaaagccgtttgaaggggctgaaggaaacttacagcggctt
tttgaaaaaaatcgcaagaaattcttggagctaaagcaatcaacaaatcacagtcttccc
ctggaatcacagagtttccaggacctgaaagtgtttctgatccagttccttcatctgtta
agcatcttccatgatacatctaaaaatccagactcgtcagatttgcaagacagttgccag
gcaacacttcagaactttaacttgtgtatgttccatgagcctgacatttatagccacgat
ggactgcagcacctcgacgatgacatggtcttcaagtttgttgtcatgtgtatggccacc
atccatctacttcagttacgaggatccaggcaggtgacagcagctacagcgttcctcctt
gcactgttctcacacatcctgaatcatgtcgtcatccgtctccacgcagccctggacgag
aaagagaacccaaacatactgcttcacagagaatttcatcaagatgttgatgaagaaatg
gaggatttttcagaccctgaagaaaatggccgaatttcccatcgtgcacatggacaggaa
gcagaagaagttccaccgtcatctcagaatcacaacaacagttcccaatacaaaagaatt
ggtaccgaaaattcaatccagcaagaaaagccagaaaaatcaaagtcatctcggattaag
agctttaagcggcggagaagaaaacggcacaatagtgacgatagctctgacctgtccgat
gtctccgacctcagtgaaggtgccgaacatttatctgaccacttcctgtcgggggactcg
gaagaagaggaagaagaatttgtaggatttttcacaaatgaatctgattcggatatgtct
gatgccttgatggaaagtcaggagttagaaccaggatttgcagaagcaagcagatcctct
gcaaactcgaactctcacgatccacagacagttttccctggtggtgtaccagaggctaat
aacgccatttggattaatcaggcagaaaaagaaaaacttgctcatctctcttcagagcta
tactcatcgtctgcatcttttctgcgacaaaatgtgcgattgtccccgcagaatagcagg
gcgtatgaatgtgatgtggcagagtttgagaactgtaaagatgtcattcaaggaaagaaa
gaagtgcctgttccaccaggttttgcatccagcaaggaagctcttcatgtagcagaaatc
accaacaagctcgctaactttgtgatagagacagatacagaggctagcatggcccccaca
gactccgaacaatctggagctgatgtagaaaatgatacggagactgaagactacagtagt
acttctgggtcaggggacagggttgagacaagtcaccaccagctgaagaatactatagat
gtggtccacaacgaggggctgctctccaccgtcaaactcatgtgtgactggatgaggtgt
aacagtggtgttataatgacgtgtgcccagagctcacagtccctgtggcatcgtctttca
gtcctgtgtaacatcctaccgctggagacggttctggctgaacacgaccagtgttggatg
gaggaggtgaagggcattctctgttccattcctagccaagattggcaccaaatatttccg
ctacgcgaggacatcaatctcgcccacttccaacccttggcggaggctcattctagtctt
aaaataaatatcaaaaggaagggacacgtatcggaaatgcaggagtgttttctgcgagtg
ggctgtatacgacaattcggccacttcctgtccagtctggaaaaccttaactttcaatac
gacgaggaacagaagatatttgtgggtcccgcccagccctctgacactcgggagaatgaa
aaagaggcaatgaagcgaattgcagacgaagaaagcagacggaaccagctgatgagggac
atggcacagttacgattacaggctgaggttagtcagctagagggatcactggacaaacat
gaccagtccagcttcccaccatacctcatcccagaccctcagtgcctgtgtgactgcctc
aacatggtcaagcagctctcacagtccggcaaaggcatcctcgtcatcccaatatctgtg
atagatacgcttgatgtcctgaagaaggagtcggggcgggcccgagaggcaattcgttgg
ctggaggcagagttccgcaagggaaacagatatatccgagcacagaagagcaacgaaaaa
ctccaagataacacgcctaaactgctgaagaaggacaaagctatgtggtgtctgtttgag
atcctgaactgtgcccgctacctggccctacagggaggcgagttgaacggtggaaatatg
gtggccgtactaacagctaaggaactggacagagccattttaccgccacttgtgaagaaa
atgttgacagcacaggaaggtgtgagcatggccagcgtatcatcctttctgaatagatgg
aaggatgtccccaagaataaaggttga
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integrated database retrieval system