Mizuhopecten yessoensis (Yesso scallop): 110453890
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Entry
110453890 CDS
T05079
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110453890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110453890
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110453890
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110453890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ODAD1_CC
PI3K_P85_iSH2
PilJ
LPP
GapR_DNA-bd
DUF948
Motif
Other DBs
NCBI-GeneID:
110453890
NCBI-ProteinID:
XP_021358774
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MADRRKLQGEIDRCLKKVGEGVETFEDIWNKISLQVHSAANTNQKEKYEADLKREIKKLQ
RLRDQIKTWCASSDIKDKRTLVENRKLIETQMERFKIVERETKTKAYSKEGLGAAAKMDP
IAKEKGDVVNWLSTTIESLQKQLEQFESRIEQLSSKKKKMDKDTQDQYEELRAAQDRHKF
HIKKLETIMRMVDNDALPLDQIKKIKDDVEYYVDSNQDPDFEENEFLYDDLDLDDLGSQV
LASSPPNDDSILDKLSSTPTSTNSSSPSPSPSLSLNHSKDKYEELDRKRHKSQNEDKQKA
TSIVTSSMSSPSSTNSSSSSVTVNKVPTTPTKMFTGNSIANAESNHRPSSTPPLTAYNVA
AAVSQQNNSAGLSFPRLFNHSVWQRNLAAMKLSYLSDRLSQAETKIQAPLDHINSTISSV
PVTSNSTITNSVSSTGNPVLPAVPIPMISNSVMSSSPNTIVSNSATSSSLMTSFQQNSVS
VKPEMQVVMNGPLSAVGPLLKGVTENDIESMSSLKSIAQQAVLDAGLENRIPTTHTTTLD
ARVHVPFNNTTSTSSQVAAPQPTSPSPSSSSDQSQQAQTTTIHLNPLLGVAPLGPVPLTR
EHYYQLTMLEAAYHHLPHPSDSERIRHYLPRNPCPTPSYYPQLSPPHTDSVDYFQRLSTE
SLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITEDFEQGTYIYFDY
EKWAQRKKEGFTFEYRYLEDRDLN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgataggcgaaagctacaaggagaaatcgacagatgtctgaagaaagtgggtgaa
ggtgttgaaacttttgaagacatttggaataagatatccttgcaggtgcatagtgctgca
aacacaaatcaaaaagaaaaatatgaagctgatctcaagcgtgagattaaaaagctgcaa
agattgcgggaccagattaaaacatggtgtgcaagtagtgacatcaaagataaacgaaca
ctggtggaaaaccggaagttgattgaaactcaaatggaaaggttcaagattgttgaaagg
gaaacaaaaacaaaagcctattcaaaggaaggcttaggggctgctgcaaaaatggatcca
attgcaaaggaaaagggagatgttgtaaattggctctcaacaaccatcgagtccttacaa
aaacagcttgagcaatttgaaagtcgaatagagcagctgtcatcaaaaaagaaaaagatg
gataaagatacacaggatcaatatgaagaactgcgagctgcacaagatcgacacaagttc
cacataaagaaacttgaaacaatcatgaggatggtggacaatgatgcactaccgttagac
caaatcaagaagatcaaagatgatgtggaatactacgttgactccaaccaagatcctgac
tttgaggagaacgaatttctgtatgacgatttagatcttgatgatctaggttcacaagtg
ctggcatcttcaccgccaaacgatgatagcatattggataaattatcaagtacgccaaca
tcaacaaactctagttctccttcacctagtcctagtctttcgttgaatcattccaaggac
aagtatgaagagctggacaggaaaaggcacaaatcccaaaatgaagataagcaaaaagca
acaagtatagtaacatcgtccatgtcatcaccctcatcaacaaactcatcctcatcaagt
gtaactgtcaacaaagtacctacaactcctacaaagatgtttacagggaattcaattgca
aatgcagaaagcaatcatcgtccaagttcaacgccaccattgacagcatataatgttgca
gcagcagtgtcccagcaaaacaatagtgcaggtctatctttcccacgacttttcaaccat
tctgtgtggcagcgcaatttagctgccatgaagctatcatacttgtctgatcgtttaagt
caagctgaaacaaagattcaagctcctcttgaccatattaattctacaataagtagtgtg
ccagttacatcaaactcaacaataacgaactctgtctcttcaactggaaatcccgtctta
ccagctgtaccgatcccaatgatatcaaacagtgttatgtcatcttcacctaacactatt
gtttcaaacagtgcaacaagtagttccttaatgacttcttttcaacagaactcagtgtct
gtcaaacctgagatgcaagttgtgatgaatggacctcttagtgctgttggaccattactg
aaaggtgttacagagaatgatattgagtcgatgtcatccttaaagtcaatagcgcaacag
gctgtgttagatgcgggtctagaaaacaggattccaacaacgcacacaacaacactagat
gcaagagtacatgtaccattcaacaatacaacatctacatcatctcaggtggcagcacct
cagcccacctccccatcaccttcatcgtcttcagaccagtcacagcaagcacagaccacg
acaatacacctcaatcctctgttgggtgtggcacccctgggccctgtgccactaactagg
gaacactactaccaattaacgatgttagaagcagcatatcaccaccttccacacccgtca
gactctgaaagaatcaggcattatttaccacgtaacccatgcccgactccttcctactac
ccacaactttctccaccacatacagactcagtggattattttcaacgattatcaacagaa
tcattattctttattttctactacatggagggtacaaaggctcaatatctggcagcaaaa
gctcttaaaaagcagtcgtggcggtttcatacgaaatatatgatgtggtttcagcggcat
gaagaaccaaagacaattacggaagattttgaacagggcacatatatctacttcgattac
gagaaatgggcccagagaaaaaaagaaggatttacctttgaataccggtatttggaggat
cgagatttgaactaa
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