Mizuhopecten yessoensis (Yesso scallop): 110454096
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Entry
110454096 CDS
T05079
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110454096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
myi02000
]
110454096
Transporters [BR:
myi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110454096
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
TM231
Motif
Other DBs
NCBI-GeneID:
110454096
NCBI-ProteinID:
XP_021359127
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSKCVVPVDSDVVMTRFITEKEKALETPTDSSVVSSCSTVYSGDETSRGNWSGRMDFLLS
CIGYAVGLGNIWRFPYLCYKSGGGAFLIPYLIFLVLCGIPLFFLEVSYGQFASLSPITVW
RICPLFKGVGYGMVIISGIVCIYYNIIITWTIYFLYYSFRAVLPWSTCDNWWNTEKCFLR
TKDHEKNTTLVTLSNETNSSNTSWSYDVSMATPLLADNDTKTASEEFWQRAVLQMSDGID
DMGDLRWDLLICLFVAWVIVFLCLFKGVKSSGKVVYVTATFPYLVLLILLVRGVTLPGAG
AGIYFYLVPDWNKLATFEVWGDAAVQIFYSVGMAWGGLITMASYNKFHNNVYRDAMVVPL
INCGTSVFAGLVIFSVLGFMAHETGVDIEKVVTQGPGLTFVAYPEAVAKLPISPLWAVLF
FLMLFTIGLDSQFGMFETMTSAFVDEFPDLLKNRKELFTAFMCFIEFLLGIPCVMQGGVY
VLQIMDWYCSTFSLMILSLTECIVIGWIYGADRFYRDIELMIGYQPCVWWKISWCYITPI
LILFIWLFSVTQLSPVTYGDYHYPQWAIILGWFLGLISLAPVPICAVILIFKETGPIMLR
VKKLLKPAENFGPAVPKYREEYVETLEKRQSYFPTIDLRCRHTGSSEFIQTGETQNFMS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtgtgtggttcccgtggatagtgatgtcgtgatgaccaggtttatcacagaa
aaggagaaagcgttagaaacgcccaccgactcctctgtggtgagtagctgctctactgta
tacagtggagatgaaacgtcccgtgggaattggtctggacgtatggacttcctactttcc
tgcattggatatgctgttggattgggaaatatatggaggttcccttatctatgctacaag
agtggaggaggtgctttcctgataccctacctgatattcctggttctgtgtgggattcct
ctattcttcctcgaggtgtcctatggacagtttgccagtctaagcccaatcaccgtatgg
agaatatgtcctttatttaaaggtgtgggatatggcatggtgatcatctcgggtatcgtg
tgtatctattataacatcatcatcacctggaccatttacttcctgtattattccttccgg
gctgtcctcccgtggagcacctgtgataattggtggaacaccgaaaaatgttttttgaga
acaaaagatcatgagaaaaacactacattggtgaccttgtcaaatgaaacaaacagctct
aatacttcctggtcctatgatgtctccatggcaactccattactggcagataatgatacg
aaaacagcaagtgaggaattctggcagcgtgcagttctacagatgtccgatggtatagac
gatatgggagacctgcgctgggatctcctcatttgtctctttgttgcctgggtcattgtg
ttcctctgcctctttaaaggtgtgaagtcgtctggaaaggtagtatatgtgacggccacc
ttcccgtatctggtgctgctgattttactagtacgcggagtgacattgcctggagcagga
gctggtatctatttctacctggtgcccgattggaacaaactagccacttttgaggtttgg
ggagacgcagctgtccagatcttttactccgtgggtatggcgtggggaggtctcatcacc
atggcgagttacaacaagttccacaacaacgtgtacagagacgccatggttgtgcccctg
atcaactgtggtacaagtgtgtttgctggtctggttatcttctctgtgttaggatttatg
gcacacgaaactggagtggacatcgaaaaagttgttactcaaggacctggcctgacgttt
gtggcgtacccagaggctgttgctaagttaccaatttcacccttgtgggcggtcctgttt
ttcctgatgttgtttacaattggtttggatagccagtttggaatgtttgaaaccatgacc
agtgctttcgtagacgagtttccagatctactgaaaaacagaaaggagctcttcacggcg
ttcatgtgcttcattgagttcctattaggaatcccatgtgtgatgcagggaggtgtgtac
gtgctacagatcatggattggtattgctccaccttttcactgatgatcctttccctaaca
gagtgtattgtcatcggctggatctatggtgctgaccgtttctaccgggacatcgagttg
atgataggctaccagccctgtgtctggtggaagatcagctggtgttatataactcccatc
cttatactgtttatttggctgttcagcgtgacccagctgagtcctgtaacctatggcgac
taccactaccctcagtgggccatcatcctgggatggttcctcggacttatctcccttgca
ccagttcctatatgcgctgttatattgatatttaaggagactggacccattatgttgaga
gtgaagaaactattgaagccagcagagaatttcggacctgccgtacccaagtatagagaa
gagtatgtagaaacattggagaaaaggcagtcatacttccccacaatcgatctgagatgt
cgacatacaggttcatcagaattcattcagaccggagaaacacaaaacttcatgagttga
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