Mizuhopecten yessoensis (Yesso scallop): 110455468
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Entry
110455468 CDS
T05079
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110455468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
myi03009
]
110455468
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110455468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
TIP49
AAA_22
AAA_5
AAA_14
AAA_2
AAA_28
NPHP3_N
AAA_18
RNA_helicase
AAA_17
AAA_33
Mg_chelatase
ABC_tran
Rad17
nSTAND3
AAA_25
ATPase
TsaE
IstB_IS21
NB-ARC
Viral_helicase1
AAA_3
NACHT
AAA_7
Cytidylate_kin2
Vps4_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
110455468
NCBI-ProteinID:
XP_021361303
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MSAQKKQQGQYFSDPRLLSRVRQYVKYASASRKPVVASVMADDLQNQFGEYARKKKNAFT
KSVEKAYKVVLKEGGIDSTSQLEDQHLRKRQKTSTKNQRSPEDDGDSSDLSGSFSSDPEI
YVSYEETNGMNNMMTNLYQKSPKPVPCKDSSNSKPSSPWYDSSSQTSKKDQDSGMSFCDQ
INITDSPCSNVSKEDNRSTNKSVFLEEMDSGGTDTTFFLDRVGSKGINSTPNDKFLDKHK
KKPVADVMDVIVLDEKEHTKKGSVKKIIKKRRNKDDGDNERQAKKSKGPEVQISSATFAD
FGGNEKCLMEVCKLLVHMKHPEVYQQLGVTPPRGFLLHGPPGCGKTLLANAIAGELGLPF
IKLAATEVVSGVSGESEEKIRDLFDKAVMSAPCIVFIDEIDAITPKRETASKDMERRIVA
QLLTCMDDLSSKASAHVLVIGATNRPDSIDPALRRAGRFDREICLGIPDEKARKRILLVL
CRTLKLTENFDLDYLAKNTPGYVGADLMSLAREASMTAVNRVFQELQTSDQVAGTPSQVP
LSNTTPSDISKEGQTDISMEIGLSDSTTDVTAETDTQKDTDAELQRVLGWLKDHPPLSPQ
QMQDLYITLEDFMEALKYVQPSAKREGFATIPGVTWDDIGALHSVREDLQLAILAPVKHA
DAFHELGMNRAQGILLAGPPGCGKTLLAKAVANESGINFISVKGPELLNMYVGESERAVR
QVFQRARNSSPCVIFFDELDALCPRRTDSGEGGSSVRVVNQLLTEMDGLEERKQVFIMGA
TNRPDIIDPAVLRPGRLDKTIYVGLPDSADRLDILMTITKKGTRPKMMEDVSLEEVANEP
RCQRYTGADLAALVREASVCALKTVINSTGDNKPSLVVTRQHFELAFTRVQPSVSMKDQA
KYEKLKDSLSSG
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccaaaagaagcagcagggacagtattttagtgatccacggttgctgtcacga
gttcgacagtatgtcaagtatgctagtgcctcaaggaaaccagttgttgccagtgttatg
gctgatgacctacagaatcaatttggcgagtatgctaggaagaagaaaaatgcgtttacg
aagtctgtggaaaaagcttacaaagtcgtcttaaaggaaggaggaatagacagcacaagc
caactggaagaccagcatcttcggaaaaggcaaaaaacaagtacaaaaaatcaaagatca
ccagaagatgatggtgattcctcagatttatccggaagtttctcttccgatccagagatc
tatgtatcatatgaggagacaaatggcatgaacaacatgatgacaaacctctaccagaaa
agcccaaagccagtaccttgtaaagacagtagtaactcaaaaccatcatctccctggtac
gattccagttcacaaacttccaaaaaggaccaagattccggaatgtcattttgtgatcag
atcaacataactgattctccttgctccaatgtttcaaaagaggacaataggagtacaaat
aaaagtgtatttctggaggagatggattctggtggtactgacaccacattctttcttgac
agggtagggtctaagggaattaactctacgcctaatgataagtttctggataaacataaa
aagaaacctgttgctgatgttatggatgtaattgttctggatgaaaaggaacatactaag
aaaggaagtgttaaaaagattattaaaaaaaggagaaataaagatgatggtgataatgaa
agacaggcaaagaaaagcaaaggaccagaagttcagatatcatcagcgacctttgcagac
tttggtggcaatgaaaagtgtttgatggaggtatgtaagctgctggtccatatgaaacac
cctgaagtttatcagcaattaggtgtaactccaccccggggattcctcctccatggaccc
ccaggttgtggcaagactctcttggccaatgctatcgctggggagctgggtttgcctttc
atcaagttagcagccacagaagtggtgtcgggtgtgtctggggagtcggaggagaagatt
agagacctgttcgacaaagctgtcatgtctgcgccatgcattgttttcattgatgaaatc
gatgccattacaccaaagcgagagactgcctccaaggatatggagcgtcgcattgttgca
cagctccttacatgtatggatgatctcagcagtaaagccagtgcccatgtactagtgata
ggagccaccaacagacctgactcaatagatcctgctctcagaagggctggccgcttcgac
agggaaatatgtcttggtattccagatgaaaaagccaggaaacgaatactgttagtgtta
tgtagaacactgaagctgacagagaattttgatttagactatctggctaaaaacactcct
ggatatgttggtgctgatctcatgtccctagctagggaggcatcaatgacagctgtaaac
agagtattccaggagctgcagaccagtgaccaagtggccggtacacccagtcaggtcccg
ctcagtaacaccacacccagtgacatctctaaggagggacaaacagatatctccatggag
ataggcctcagcgattctaccactgatgtgacagctgaaacagacacacagaaagacact
gacgcagaattacaaagagtgttgggctggctgaaggaccatcctcccctgagtccacag
cagatgcaggacctctacattacgttggaagacttcatggaagccttgaagtatgtccaa
ccgtcggccaagagggaagggtttgcaaccatccctggtgttacctgggatgacatcggg
gcactgcacagtgttcgggaggacctacaactggccatcctcgctcctgtgaaacatgct
gatgcattccacgaactcgggatgaacagagctcagggaatcctgctggcagggcccccg
ggctgtggaaaaactcttctagccaaggcagttgcaaatgaatcgggtataaactttatt
tctgtcaagggaccagagttactcaacatgtatgtaggagagagtgagcgggcagtcaga
caggtgttccagcgggctaggaactcttcgccctgtgtgatattttttgatgaattagat
gcactctgtcctcgtagaactgatagtggagagggtggctccagtgtgcgtgttgtgaac
cagcttttgacagagatggatggtctggaggaaagaaaacaagtgtttattatgggggct
acaaacagaccagatatcattgatcctgctgtcttaagaccaggcagactggacaagact
atttatgttggacttcctgattcagcggaccgtctggacatcttgatgactatcacaaag
aaggggacaagacccaagatgatggaggatgtgagtctggaggaggtggccaatgaaccg
aggtgtcagcgctatacaggagcagacctggcagcattggtgagggaggcttcagtgtgt
gctttaaagacagtcattaactctacaggagataataagccctccctcgttgtcaccaga
caacactttgaattggccttcaccagagtccaaccatctgtgtcaatgaaggatcaggca
aaatatgagaaattgaaggattcattatcctcaggatga
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