Mizuhopecten yessoensis (Yesso scallop): 110455936
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Entry
110455936 CDS
T05079
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04140
Autophagy - animal
myi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110455936
04148 Efferocytosis
110455936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110455936
Membrane trafficking [BR:
myi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110455936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Motif
Other DBs
NCBI-GeneID:
110455936
NCBI-ProteinID:
XP_021362074
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MHDAYEAIPILEKLPLKIESVACYEDTLLVGTKECHLLQYKVKRTTGADAKAEVTLVRSY
KNFARKPILQLAVVPELFLLISLSDNIINVHELSTFGLLTCLSKTKGATLFAIGVQRTKS
LSGEVACTLRLSVAIKRKIQTYYWKNRDFMDLQPEFNMYDVPRDMVWCKDTICVGFKRDY
FIVKINTGNTKELFPVGTKQQDPIVTRLENDTLLLGRDEMSILIDDEGSPTQKYPINWTD
IPIQIENHPPYIIALLPKHVEIRTISPRLLIQNIELQKARYICQGSGCIYVASSNHVWKL
NAMPIAYQIRQLLEANQFELALHLADMTEEPEDEKQTRINRIKTLHAFNLFCERKFEESM
SIFVKLGTDPSHVIGLYPNLLPNEYRSQLEYPKRPPELEGGDLEKGLLSLQDYLTQKRVD
VCKDINKEVQTTAIKEGNKTIKSKRQLSQIIDTTLLKCYLQTNDALVAPLLRIKDNNCHV
EESEKILKRKEKFSELIILYEKKGLHQKALNLLMNQAARPSSPLKGHDRTVQYLQHLGRD
HLDLIFEYAEWVLKQHPEDGLKIFTEDLPEVDSLPREQIFKYLEKTAKDLAIPYLEHVIL
ECDDHTPDFHNALAQLLRDKVQALMADYIQSLPEGHLPSKAGQEQGELGEYRRKLIQFLQ
VSHDYVPERLLTRFPLDSFYEERAILLGRLGRHELALGIYVHILHDTPAAERYCHEYSER
NREENKDVYLDLLKMYLQPPSSSSLGISPGQGFTPKPSMEAALRLMKEHAAKIDSTKALE
MLPAATNIEEILNYLESVMEHQATERRKNQILKSMFYAENLQVHEQRMFYHKHKVVINDE
KMCKVCKKRIGNSAFARYPSGMVVHYFCCKDPKVNPVEK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgtatgaggccattccgattctggaaaagcttcccctgaaaattgaatct
gtagcttgttacgaggacacattgcttgttgggacaaaagaatgccatctcttacaatac
aaagtgaagcgtacaacaggagcagatgcaaaagcagaggtgactttggtgagatcatac
aagaattttgccaggaaacccattttacagttggcagtggtaccagaattattcctgctc
atcagtctttcagataacatcatcaatgtgcacgaactatctacatttggtctgctgaca
tgtctgtccaaaaccaaaggagccacactgtttgccataggtgttcagaggacaaagtcc
ttgagtggggaggttgcttgtaccctcagactgtctgtcgctataaaacgcaagatacag
acctattactggaagaacagagatttcatggacctacagcctgaattcaacatgtacgat
gtgcccagagacatggtttggtgtaaggatacaatttgtgttggcttcaagcgggactat
ttcattgttaagataaatacagggaacaccaaagagttgtttccggtcggaaccaaacaa
caagatcccattgtaacacgactggagaatgatactcttctacttgggagggatgaaatg
tccattctcatcgatgacgagggaagcccaacccagaaataccccatcaactggacagat
atccccatacaaatagaaaatcaccctccatatatcatagccttattacccaaacatgtg
gaaattcgaacgatatccccacgtcttctcatacagaacattgagctccagaaggcccgc
tacatctgtcaggggagtggttgtatatacgtggcctcgtctaaccatgtgtggaagctg
aatgccatgcctatagcttatcagattcgacaactgctggaggctaatcagtttgaacta
gctctacatcttgctgatatgacagaggagccagaggatgagaagcagacacgaattaac
cgaataaaaactcttcatgcatttaatttattttgtgaacgcaagtttgaagaatccatg
tcaatatttgtcaagttaggaactgatccgtcccacgtgatagggctgtaccctaacctc
ctacccaatgagtaccgtagtcaactggagtacccaaagagaccaccagagctggaaggg
ggcgatctggagaaaggtcttctatccctacaggactatcttacacagaaaagggtagac
gtatgtaaagatatcaataaggaggttcagacaacggccatcaaggagggcaacaaaacc
atcaagtccaaacgtcaactcagtcagatcatcgataccaccctgctgaaatgttactta
cagacgaatgacgccctggtggcgccactgttgagaatcaaagacaacaactgtcatgtg
gaggagagtgagaaaatcctcaaacgtaaagagaagtttagtgaactcattatcctgtat
gagaagaaaggacttcatcagaaagccctaaacttactgatgaaccaggctgcccgtccc
agctcaccactcaaaggccatgaccgcactgtgcaatatttacaacatctagggcgagat
cacttagacctgatatttgagtatgctgagtgggtgttaaaacagcatccggaggacgga
ctcaaaatttttactgaagacttaccagaggtggacagcctgcctagagaacagattttc
aaatatctggaaaaaacagcaaaagatcttgccattccttacttggaacacgttattttg
gagtgtgatgaccatacaccagacttccacaacgctctggcacaactactacgagataaa
gtccaggctctgatggccgactacatccaatctctccctgaagggcacctgccaagtaag
gctggacaggaacagggtgagctgggggaatatcgcaggaagttgatacagttcttacag
gtgtcgcatgactatgtaccagagaggctgctaacacgattcccgctagacagtttctac
gaggagcgggctatactactggggaggttagggagacatgagttggctctgggaatctac
gtccacattctacatgatacacccgccgctgaacgatattgtcatgaatactctgaaaga
aacagagaggagaataaagatgtgtacctggacctactgaagatgtatttacagcccccc
tcctcctcctccctcggaatctcccctggtcaagggtttacaccaaaacctagtatggag
gcagctcttcgactaatgaaggaacatgctgctaaaattgactccactaaggccttggag
atgttaccagcagcaactaacatagaggagatcttaaactaccttgaaagtgtgatggaa
catcaggcaacagaacggcgaaaaaatcagatcctcaaaagcatgttttatgctgaaaat
ttacaggtccatgagcagagaatgttttatcataaacacaaagtggtgatcaatgatgaa
aagatgtgtaaagtctgcaagaaacgaattggaaacagtgcgtttgccagatacccgagt
gggatggtcgtccattatttctgctgtaaggatcctaaagtgaaccctgtggagaaatga
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