Mizuhopecten yessoensis (Yesso scallop): 110456047
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Entry
110456047 CDS
T05079
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110456047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110456047
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110456047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG16
Motif
Other DBs
NCBI-GeneID:
110456047
NCBI-ProteinID:
XP_021362246
LinkDB
All DBs
Position
Unknown
AA seq
2367 aa
AA seq
DB search
MAVVQSVSELLDILKAETISDNITEKITSLFESKDTTIDEFKTKYERLRVDAEQKYFDIE
QQLITSNNKLETESTSNEENKRRVEELEKKFNEADSKRKSLQESQDNSLSTNLRLSKSNE
QLELDKRDLSVLLEKRNREIDRINEEWKELTDKVSRANTEKCEAQAKLAEVQNQSVTLEF
QNKRLEQEKSQIQRQLDLLDKQLFEKTNELLNVKKEQTASLLETQSKLEEKIGENTFLQE
TVAALKSSQGEQANKIDGLIQKLKDARNGMAQSEDQFNQELQAKSRLIDLYKTSKDEAES
KVKELTSAVEELRTLLKEAANAHTELENLKEEGAKHSQVDIESREETIEKLRQELVSAND
LLEQTKNRIASEDQVESMFPTASVTSKVLKSGMSLTQIYNEYVQASDALMLEKEENQRLN
QYLTQILQEIEEKAPLLKKQRQDYENSLANIDQLTRQLDASMLESQNLRLEADDINRKYN
HMQRENQKLQLQTNDLSKQLRYILKEMAELRGGRVVREVEQPSTEVSSSSQVISDKLVTF
RTIEDLQVQNIRLLTVIRELSDKQEQEEKMATDTKTKELKEQLQIANSEIQELKSSRDKQ
VRMVESIVRQRDLFKVLSQSGMALSQSMTDGDVSMTTPVKKSPVGMKQSPSSDKALQDMK
TALTQLQEDFNNYKKEKKENEKIMDEEMEKYRNGLSSMTVQNAKMSSQVDYSAEKYKVLQ
GNAEGYRKEIAALRDKVQKYSTSVAKHEQTINILRQDLMSSKENFARSDTQAQNLRIEKE
LSKQSEQRLLQDVEAMRRERHSQAMLMANLEAIKNNIERSESETRNRYTNKIDALEMENN
NLTRKLHSAQDEQKTITTIFESQIKEIRSQLEQELENHEVDKKHLRGVQQEIEDSKNKLE
AAEAKLATAEMRLANTSTTVTDSVSLNAEAVNEEVKDLQSQLEQSQHNVSTLRDQLSKSQ
DHVTNYKAIADGLQKTMDEQSMANNQFEQKFEEMLEAKKHAEKRTEDLEKEHQDLLNENI
RVSEESHKLNADLRKQLACLQNELQEAVQRREEAIAKEAKAIQENRSQTNLASEVQDKYQ
RELILHAADVEALTIIKKQMDEHNEKLATEQECRIKAEKILEESKGSWQEQEKTLKTECV
RLQKRIQDFSQQNNLLHQQIEKMSLDVVAVQQAVTRNESFSTSPEDTAKSSEQLLEVVKF
LRREKEIAETKLEIVQSESKTVRQQLERVQRSLEEANDAMREEREHSQTNLQTAAQHAEL
MRKVENLNLLTDSNRLLRDEKTKSEQQVQTLEAKVATLEQSIDPLQSSVRDSQSHRDAIG
AERDALRNEVERWKSRTNHLIEQANRTDPEEHRKLILEKENIRKDVIRLTEENHRTRAEV
SRLTNSLTMAQRESGASKQEIEKIQRELNASKQETEKFQKEIAGKVAECVTKDNDSEEKT
KTINQLKKIGRKYKEQAEAVRKELDDFQAQQAAQSKEPAPPSTEVIEQAVAPIQEKLSAA
EKERDELKQRLEQTTTESNTTKEQSLKLQQELTQSKEESSKVREENAEYEKKLNQSRNVL
QAAKKKIGSQNEQIEKVTTEMNDLKQKLSMSEKQKMSVSEKMKGDVEQRVLAVRSEVEEK
LSKMEKELAETRATKDSAINNVSEVQTVLQRAQEENTELQTKIQQLQKQIESQQTKSVPP
QPQVARPSATVTVERVSAPTSEAPKTANIRPMASPVPVTPRTQPAQIQPQSAATKATASI
RPMAIAPTTVAPSSGPTPTATVMPTTVSVQDNQESSQVSQLSPALARPTQHVQRVTPQVE
SGTEPTVVVTETEVVSSHTEMAAVDPQPSSSAACDSQATGTQLKRSRDDMEGHEEETDAK
RTRVSPDQQALPSITVTDEHANTTPIPEQGGTATQDTEVTGSEVPSDSLPTQIFESSLDQ
AYESQATVCFDTQEMIEEETEVEEADDDDDDAVIVVESDEEDDEDAEDYDDDDDNEGYNE
EMGDYDEDEEEDDDEPIQDDDYEELPEGHAEEGEDEYQTDTQPGEMHSPGDEGDDEVVIV
DDEDNDNQMEPQEPEVQPVPQVVAPSVQTPVSQRSQLPFHAMERQMSVTRTQLAPFVLGG
QAGGFEDGEDCIVPSTPTLFVPNRGDGGFAEAVSSPQIPHQRFTFTSHTEAIAHHDLGQL
ESQEALGMDDTQMDLSQLEEEQGHSVPTNPVHQAPTATTSGESFDPVPSVSVVDDSLTTD
SGPENLTTDTVGESGHDPSTSTGKPEQSEASGGQEGESGTAGSSAAGSDPLSSSFGQAAD
KSDAGKAKKIQPIIWEQTGMPIQTTVSLSQPVQHLRGRGSVRGAGQTRGIMQHPRGHRGY
NRPRAPTPRGTRIMRGGRGGSYRPPMY
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgttcaatcggtctccgagcttttggatatattaaaagccgagaccatatcg
gacaacataacagaaaaaataacaagtttattcgagtcgaaagataccacaatcgacgag
ttcaagacaaagtatgagaggcttcgtgtcgatgcagaacaaaaatattttgatattgaa
caacagctgatcaccagcaacaacaaattagaaacagagtccacatctaacgaagaaaac
aaacggcgagtggaagaattggaaaagaaattcaatgaagcagactctaaaaggaaaagt
ttacaggaatctcaggacaattccttgtctacaaatctccgcctcagtaaatcaaatgaa
cagctggagttggacaagagagatttaagtgtcttacttgagaagaggaacagagaaatt
gatagaataaatgaagagtggaaggagttgacggacaaagtgtcgagagccaacacagag
aaatgtgaggcgcaggccaaactggcggaggtacagaaccagagtgtcaccttggagttc
cagaacaaacgactggaacaggagaagagtcagatacagagacagctagatctgctggac
aaacaactgtttgagaaaaccaatgagctcctaaacgtcaaaaaggaacagacagccagt
cttctggaaactcagagcaagttggaggaaaagataggagagaacacgttcctccaggaa
acagttgcggctctgaaatcatcccagggagaacaggccaacaagatagatggccttata
cagaaactgaaggatgccagaaatggaatggctcagtcagaggaccaatttaaccaggaa
ctgcaggcaaagagtcgtctaatagacctgtacaagacatctaaggacgaggcagaaagc
aaagtgaaggagttgactagcgctgtagaggaactaaggacactattgaaggaggcagcc
aatgctcatactgaacttgaaaatttgaaggaggagggagcgaaacactcccaagtagat
atagaaagcagagaggagacaattgagaagctgagacaagaactggtcagcgccaatgat
cttctggaacagaccaaaaacaggattgccagtgaagaccaggtagagagtatgtttcct
actgcttctgtgaccagtaaagtactgaagtctggcatgtctctcacacagatctacaat
gagtatgtccaggcctctgatgcacttatgctggagaaggaagaaaatcagcgactaaac
cagtacctgacacaaattctgcaggaaattgaggagaaagccccgctactgaagaaacag
aggcaggattacgagaactctctggctaacattgaccagctgaccagacaactcgatgct
tccatgttggaatctcaaaatctacgacttgaagcagatgacatcaataggaagtacaat
cacatgcagagagagaatcagaagctccagcttcagacaaacgatctgtcaaagcagctg
cggtacatcctgaaagagatggccgagttgcgaggcgggcgtgttgttcgggaagtagaa
cagccgtccacagaggtcagcagttcctcccaggtcatcagtgataagctggtcaccttc
aggaccattgaggatcttcaggttcagaatatacgcttattgacagtaatacgtgaactc
agtgataaacaggaacaggaggagaagatggctaccgacacaaaaacaaaggagttgaaa
gaacaactgcagatcgccaactcagagatccaggagttgaaatctagtcgggacaagcaa
gttagaatggtggagagtatcgtgcgacagcgggatctgtttaaagtgctgagccagtca
gggatggcgttgtcccagtctatgactgatggcgatgtgagtatgaccactcctgtgaag
aagtccccggtcgggatgaaacagagcccgtcatcagataaggccttacaggatatgaaa
actgccctaacacaactacaggaggacttcaacaactacaagaaggaaaagaaggaaaat
gagaagatcatggacgaagagatggagaagtacagaaatggtctgtcatctatgactgtc
cagaacgcaaagatgtcatcacaggtggactattccgcggagaaatacaaagtgttgcag
ggtaatgccgaaggctacagaaaggagatcgcagcactgagggacaaagtacagaagtat
tctactagtgtcgccaaacacgaacaaaccatcaacattctcagacaggatctgatgtcg
tccaaggagaactttgcccgctcagacacccaggcacagaatctacgcatagagaaggag
ctgtcgaagcagtctgaacaacgcctcctacaagatgttgaggcaatgaggagggagaga
cactctcaagccatgctcatggccaacctagaggccattaagaataatatagaacgttct
gagtcggagacgaggaacagatacaccaacaagattgacgccctggagatggaaaacaat
aacttgaccaggaaactccactcagcccaggatgagcagaagacgattacaaccatcttt
gagagtcaaatcaaggaaatccgcagtcagttggaacaagagctggaaaatcatgaggtg
gacaaaaaacatctccgcggtgtacagcaagaaattgaggactcgaagaacaagttggaa
gcagccgaggcaaagttagcaacggcagaaatgagactcgccaacacgtcaacaacagtc
acggactctgttagcttgaacgctgaggctgtgaacgaagaagtgaaggacctccaatct
caactggagcagtctcagcataatgtcagcactcttcgggatcaactcagcaaatcccag
gatcatgtgacaaattacaaagccatcgccgacggactccagaagaccatggatgaacag
tcaatggcaaataaccagttcgagcagaagtttgaagaaatgcttgaagctaagaaacat
gcagagaaaaggacagaagatttggagaaagagcatcaagatctactcaacgagaacatc
agggtatcagaggagagccacaaactgaatgccgatttgaggaagcagttggcgtgctta
caaaacgagctacaggaagctgttcaacgacgagaggaggctatcgccaaggaggcgaag
gcaatccaggaaaaccgctcacaaacaaacctggcctcggaggtccaggataaataccag
agagaactgatactacacgctgctgacgtggaggcccttacaatcattaaaaaacagatg
gacgaacataatgaaaagttagctacagaacaggagtgccgtatcaaagcagaaaagata
ctcgaggaatccaaggggtcttggcaagagcaggagaaaacactcaaaacggagtgtgtg
cgtctgcagaagaggatccaagatttctctcaacaaaacaatcttctacaccagcagata
gagaagatgagtctggatgttgtggctgtccaacaggctgtcactcgtaatgaatcattt
tcaacaagtcctgaggacacggccaagtcatcggaacaactcctcgaagtggtgaaattt
ttacgtcgtgagaaagagattgcagaaacaaagctggagattgtacagtccgagtcaaaa
actgtgcgtcagcagctggagcgagtacagcgctccctggaggaggccaacgatgcaatg
cgtgaggagcgggaacactcacagactaatctacagacagcagcccagcacgctgagctg
atgaggaaggtggagaatctgaacctcctcacagacagtaaccgtctgctgagggacgag
aaaacgaaatcggagcagcaggtccagaccctggaggctaaggtggcgaccctggagcag
agcatcgaccccttacagtccagtgtgagagactctcaatcccatcgtgatgccattggg
gccgagagagatgccctgaggaatgaagtcgagagatggaagtcccgcacaaaccacctc
atagaacaggccaacaggacagatcccgaggagcacaggaaattgatcttggagaaggaa
aacatcaggaaggacgtgatcagattgacggaggagaatcatagaacaagagctgaagtc
tcccgattaacaaacagtctgactatggcacagagagaatcaggtgccagcaaacaagaa
atagaaaaaatacagagagaactaaatgcaagcaagcaggaaacagaaaaattccagaag
gaaattgcaggcaaagtggctgaatgtgtaacaaaggacaacgacagtgaagaaaagaca
aaaacaataaaccagctgaagaagatcggacgaaagtataaggagcaggcggaggccgta
cggaaagagctggacgacttccaggcccaacaggcagctcagagtaaagaacctgctcca
ccaagcacagaggtcattgaacaggccgtggctcccatccaggagaagctcagcgccgca
gagaaggagagagacgaactcaaacagagattggagcagacgacgaccgagtccaacact
accaaggaacagtccttaaaactacaacaggagctgacacagagtaaagaggaaagttcc
aaggtcagggaagaaaatgctgaatatgaaaaaaaactcaaccaatcacgaaacgtctta
caagctgcaaagaaaaagattggctcgcagaatgaacagattgaaaaagtcactacagaa
atgaacgatctgaaacagaaactgtccatgtctgaaaaacagaagatgtccgtgtcagaa
aaaatgaaaggtgatgtagagcagagagtgttggcagtacgatcagaggtggaagagaaa
ctgtccaaaatggagaaagaactggcagaaacccgagctacaaaggattctgccattaac
aatgtgtctgaggtacaaactgtgttacagagagcccaggaggaaaacaccgagctacag
accaagatacaacagttacagaagcagatcgagtcccagcagaccaagtcagttccgcca
caaccacaggtggctcgaccctctgccactgtcacggtggagcgtgtcagtgcgcctacc
tctgaggctccaaagacggccaacatccggccgatggcgtccccggtacctgtaacaccg
cggacccagcctgctcagattcagccacagtctgctgccactaaagccaccgccagtatt
cgaccgatggccattgccccaacaacagtggcacccagtagtggccccacaccgacggct
actgtcatgccaaccacagtatctgttcaggacaaccaggagagctcccaagtgtcccag
ctgtctcctgccctggcccgccccacccagcatgttcaaagggtcactccccaggtggaa
tctggcacagaaccaacagtggttgtcacggagacagaggtagtgagtagtcacacagag
atggctgccgtagatccacagccatcttcttcagcagcctgcgactcccaagcaacaggc
actcaactgaaacgttcacgtgacgacatggaaggacatgaggaggagacggacgccaaa
agaacgagagtatctcctgaccagcaggcactcccatctatcactgttactgatgagcat
gccaacacaacgcccattcccgaacagggaggcacggctacccaggataccgaggttacg
gggtcagaggttccgtcagacagtttacccacacagatttttgagtcgtcactggaccag
gcctacgaaagtcaggccaccgtgtgctttgatactcaggaaatgatagaagaggagact
gaagtggaggaggcagatgatgatgatgatgatgcagtcatcgttgtggagagcgatgag
gaagatgatgaggatgcggaagattacgatgatgatgatgataatgaaggatataatgaa
gaaatgggtgattacgatgaggacgaggaagaagacgatgatgaaccaatacaagatgat
gactatgaggagttaccagagggacacgctgaagagggggaagatgagtaccagacagac
acacagcctggggaaatgcacagccctggagatgagggagacgatgaagtggtcattgta
gatgacgaggataatgacaaccagatggagccacaggagccggaggtgcagcctgtgcca
caagtggtagcgccctctgtacagacgccagttagccagcgctcacagctaccgttccat
gccatggagcgccagatgtctgtcacgcgtacacagcttgcaccatttgtactgggggga
caagccggagggtttgaggatggagaggactgtatcgtgcccagtactccaacactgttt
gtccccaacagaggtgatggaggatttgcagaggctgtcagttctccccagatcccccac
cagaggttcaccttcaccagtcacacagaggccatcgcccaccacgacctcggccaactc
gagtcccaggaagccctaggaatggatgatactcagatggatttgtcccagttagaggaa
gaacagggacacagtgtacccaccaatcctgttcaccaggctcctacagcgacaacttct
ggagagtcgtttgatcctgttccgtcagtcagtgttgttgacgactcccttacaacagac
agtggcccggagaaccttacaactgacacagtaggagaaagtggccacgatccttcaaca
tcaacaggtaaaccagagcaatcggaggcaagcgggggacaggagggcgagtctgggaca
gctggatcttcagctgcgggcagtgacccactgtcatcctccttcggacaagctgcagac
aaatctgatgcagggaaagcgaaaaagattcagccgattatatgggagcagacgggaatg
ccgatccagaccacagtgtccctctcccagccagtacagcaccttagggggcggggcagt
gtacggggggcaggacagacgaggggaattatgcagcatccccgcggacacagaggttac
aacaggcctcgggcaccaacaccacgtggcacgcgcatcatgaggggtggcaggggaggc
agctataggcctccgatgtactga
DBGET
integrated database retrieval system
