Mizuhopecten yessoensis (Yesso scallop): 110456442
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Entry
110456442 CDS
T05079
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myi03400
]
110456442
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110456442
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110456442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_PWI
Helicase_C
AAA_22
DEXQc_Suv3
AAA_30
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
110456442
NCBI-ProteinID:
XP_021362889
LinkDB
All DBs
Position
Unknown
AA seq
2219 aa
AA seq
DB search
MSNLPRLTGAIRAFSGLSASPEHATGIQQSDLQQKRHLVAEKQSNSQSWNTLCTQIRKEV
DASGSDIKAALKDLSYCARNIVGQEASLETVEGAAAFLFGLFKTATMDTVSSKEANKLRN
IFGPFPASAASKACAIVRKIVSWMPEDAALLMDNQMREEAEGEASVKEFGQNIKFSCLMA
SAEYLSSSESDSDEANHRDLDLKYSDNRPAQKLKGNASQTDSSQYDAGWLQREVKKYYPT
GDSALGMTTEDISSTIFDVLISSKTDQELQNDLFELLGFDRFELIENLLQNRKVVIQSSL
TSDPSTRPNGARKKGDGGNKPAYGCQVIVQTEQERKLMKQLRRDEKRFDKKGGWQEEEGE
GISFNPQELRSQREAALKSAVMAPLFSDRSFRPQARERYPNVHDSMEEARQSSAFVGGVK
LALPDSFHRSTHKLYEEVHIPHTEATSLTVGNTRVPVADLDEIAQMAFKGTVTLNRIQSM
VFEAAYKTNENLLICAPTGAGKTNIAMLTVLHELKQHISQGVIKKDEFKIVYVAPMKALA
AEMVRNFGNRLESLGIAVRELTGDMQLTKAEILKTQMLVTTPEKWDVVTRKSTGDVALAQ
LVKLLIIDEVHLLHDDRGAVIESLVARTLRQVESTQNMIRIIGLSATLPNYLDVARFLHV
NPYLGLFFFDGRFRPVPLGQTFIGIKSTNKMQQLQDMNTVCYEKVLEQVRKGYQTMVFVH
ARNDTVRTASVLNEMAKNNGDSGFFVPDRSIQYGDALKSMMRSRNKQLKELFPDGFGCHH
AGMLRQDRNLVERYFSAGFIKCLVCTATLAWGVNLPAHAVIIKGTQIYDAKKGSFVDLGI
LDVMQIFGRAGRPQFDKFGHGTIITAHDKLSHYLSLMTRQNPIESQFCNSLTDNLNAEIA
LGTVTNVEEAVKWLSYTYLYVRMKCNPLVYGINFNTLETDPMLEAHRRDLITDAGRKLDK
TRMIRFDERTTYFSSTDLGRIASHFYIKYDTVEVINENLKSLMTEADVFAMVSKSQEFDQ
IKVREDEMGELDNLLSDTCVMQVQGGVENTYGKVNILMQVYVSRMNIESFSLISDQAYVA
QNSARIVRALFEVCLKNGWPVMASRLLNLCKTLDKRLWGFEHPLRQFPNLSREILDKLEA
RKLTVDRLKDMDPKEIGHMVHHIRMGPVIKKCVNQIPALDLDATIQPITRTVLRVRLSID
PVFHWDDKVHGTSAESFWVWVEDPENNHIYHSERFLLHKKMVKAKEVQILIFTIPIFEPL
PSQYYVKAVSERWLGSEAMCAISFQHLILPEKHPPHTELLDLQPLPITAYNDPQIEALYK
YTHFNPIQTQIFHVLYHTDCNVLLGAPTGSGKTVAAEMAIFRVFKEYPKAKAVYIAPLKA
LVRERMEDWKVRIQQKLGKKVVELTGDVTPDMRAVANADLIVTTPEKWDGVSRSWQTRNY
VKAVAVLIIDEIHLLGDERGPVLEVIVSRTNFISSHTSKPVRVVGLSTALANARDLADWL
GIKQMGLYNFRPSVRPVPLEVHINGFPGQHYCPRMATMNKPTFQAIKSHSPEKPVLIFVS
SRRQTRLTALDLIAFLAAEENPKQWLHMAEMEMENLICGIRDTNLKLTLAFGIGIHHAGL
QERDRKSVEELFVNQKIQVRLALLVKQKIQVRLALLVKQKIQVRLALLVKQKVQIITPPP
TQFLSSRSGSEKPSIKRSEFDVLQMMGRAGRPQFDDNGVAVILVHDIKKHFYKKFLYEPF
PVESNLLDVLPDHLNAEIVAGTIASKQDAMDYITWTYFFRRLVMNPSYYNLDDTDYDSIN
KFLSGLVEKALFELESSYCLEIGEDNKAIRPQTLGRISSYYYLNHNSVRKFRHSLNAECT
IEDLVEVLSSAEEYAQLPVRHNEDQINSELATKVPLAVNPHSYESSHTKACLLLQAHFSQ
LSLPSSDYNTDTKSVLDQAIRVLQAMLDISADQGWLVTTLRITILIQMVIQGRWSTDNAL
LTLPHMTPYHLSCLRPKGGEGARRKGSAMPRGPISSLPELIAVCDGRYETLLTMLDGEMD
RMQLDQMYTVIGKLPQIQVNISIKGWWEGGEGQQDVRIHTSKDGGRRPDSDWIKVHADQE
YVIQVALTRVNKTKKSDSKAQAPRFPKPKDEGWFLVIGEIENKEVIALKRTGFVRGRSRL
QMAVYTPETTGRVIYTLYLMSDSNLGLDQQYDICLDVIPASIESQVNTELVGELNDLAF
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcttcctcgtctgacgggggccatcagggccttttctggccttagtgcatcc
ccagagcatgcaactggcattcagcagagtgatcttcaacagaaaagacacctagtggca
gaaaaacagagtaacagtcagtcatggaacacactttgtactcagatcaggaaggaggtg
gatgcttcagggtcggatataaaggctgcactgaaggacttatcttattgtgccaggaac
atagttgggcaggaggcttccttggagacagttgaaggtgctgcagccttcctgtttggc
ctgtttaagacagccactatggacacagtgagcagcaaagaggctaacaaactgaggaac
atttttggaccgtttccagcttcagctgcttccaaagcctgtgccattgtcagaaaaata
gtctcctggatgcctgaggatgcagcattattaatggacaaccagatgagggaggaggct
gaaggagaggcttcagtgaaggaatttggacagaatataaaattttcttgtttaatggca
tcagcagaatatttgtccagttcagagtctgacagtgacgaagctaaccatcgggactta
gatctgaaatactcggacaatagaccagctcaaaagttgaaaggaaatgcatcacagact
gacagttcacaatatgatgctggatggctgcagcgagaggttaagaagtactacccgact
ggtgactcggccttggggatgacaacagaggacatcagctccactatttttgatgtactc
atatcctctaagactgaccaagaactacagaatgatttatttgaacttcttggatttgat
cgatttgagctgatagaaaatttgctgcagaacagaaaagtggtcatacaaagttctctg
acctctgacccctcaaccagacctaatggtgcacggaaaaaaggtgatggaggaaacaag
cctgcttatggctgtcaagtcatcgtccagactgagcaagagaggaaactaatgaaacag
ctgaggagagacgagaagcgcttcgacaagaagggaggttggcaggaggaggaaggggag
ggtatcagctttaatcctcaggaactacgcagtcagagggaggcagcccttaagtctgca
gtgatggcccctttgttttctgaccgatccttccgaccccaggccagggagagatacccc
aatgtgcatgactcgatggaggaggctcggcagtcctcagcctttgtgggaggggtcaag
ttggcacttcccgattccttccatcggtcgacccacaaactttacgaggaggtccacatt
cctcacacagaggctacatctctcactgtaggcaacacgagagttcctgttgccgatctt
gatgagatagcacagatggcctttaagggtacggtgaccctcaatcgtatccagtctatg
gtgtttgaggcagcctataagaccaacgagaacctgttgatctgtgccccaacaggcgcg
ggtaaaacaaacatcgccatgttgaccgtcctccatgaactcaaacagcatatctcccag
ggagtgatcaagaaggatgaattcaagatagtgtatgtagcccctatgaaggcactagct
gctgagatggttcggaactttgggaatcgtctcgagtcattggggattgctgttcgggaa
ctcacaggagacatgcagctgaccaaggcagagatactgaaaacacagatgttagtgacg
accccggagaagtgggatgtggtgacaaggaagagtaccggggatgtggccttggctcag
cttgtcaaactcctcatcattgacgaagtgcaccttctccatgacgacagaggggctgtc
atagagagtctggtcgccaggacactaagacaggtggagagtacacagaacatgattcgt
atcattggtctatctgccactctccctaactacctagatgtggcgcgcttccttcatgtt
aacccgtacctgggactcttcttctttgatggccgtttcagacccgtacctcttgggcag
actttcattggaatcaaatctaccaacaagatgcaacaactacaggatatgaatacagtc
tgttacgaaaaagtcctggaacaagtcaggaaaggttatcagacaatggtgtttgtccac
gcccggaatgacactgtcaggacggccagtgtcctcaatgaaatggcaaaaaacaacggt
gacagtggcttctttgtgcctgaccgctcaatccagtacggagatgctctgaaatcgatg
atgcgatcacggaacaaacagctgaaggaactgttcccagatgggtttgggtgtcaccac
gcaggcatgctcagacaggaccgtaacctggtggagcgttatttttccgcaggctttatc
aaatgtctagtttgtaccgccaccctagcctggggagttaacctcccagcgcacgctgtc
atcatcaagggtacccaaatttacgatgctaagaaaggttcgtttgtggatcttggtata
ctggacgtgatgcagatttttggtcgagctggacgtccacagtttgacaagtttggacac
ggaaccatcatcacggcacatgacaaactgtctcactatctatccctgatgaccagacag
aaccctatagagagtcagttctgtaatagtcttactgacaacctaaatgcagagattgca
ctggggacagtgaccaatgtggaggaggcggtcaagtggctaagctacacttacttgtat
gtacggatgaagtgtaaccccctcgtatacggcatcaactttaacacattggagactgac
cccatgttggaggcacatcgtcgcgacctcattacagatgccggcagaaagctggacaag
actcgaatgatcaggttcgatgagagaacgacctacttctcctcaactgacctgggcagg
atagccagtcacttctacatcaaatatgacactgtagaggtaataaatgaaaatctgaaa
tccctgatgacagaagcagatgtatttgccatggtttcaaagtcccaggagtttgaccag
ataaaggttcgggaagatgagatgggtgaactggacaacctgctgagtgacacgtgtgtg
atgcaggtgcaaggaggtgtggagaacacgtatggcaaggtcaacattctcatgcaggtg
tacgtgtcgcgcatgaacatcgagagcttctccctcatctctgaccaggcctatgtagct
cagaactctgcacgtattgtgcgtgcactgtttgaggtgtgtctgaagaacggttggcct
gtgatggccagcagactactcaacctgtgtaaaaccctggacaagcgactgtgggggttt
gagcatcccttaagacagttcccaaacctctccagggagatccttgacaaactagaggct
agaaaactcactgtggacagactcaaggatatggaccctaaagaaataggtcacatggtt
caccatatacgcatgggacctgtcatcaagaagtgtgtgaaccagattccagccttagac
ttggacgccaccatccaaccaatcacacgtactgtactcagagtgaggctgtccattgac
ccggtcttccattgggatgacaaggtccatggaacgagtgccgagtcattctgggtgtgg
gtggaggacccggaaaacaaccacatctaccactcggagcgcttcctcctccacaaaaag
atggtgaaggcgaaagaggtccagatcctgatcttcacaatcccaatctttgaacctctg
ccgagccagtactacgttaaagcagtgtccgagagatggctgggatcagaggccatgtgt
gccatctccttccaacacctcatccttcccgagaaacatcccccccacacagagttactg
gatctacagcccctgccaatcacagcctacaacgacccccaaatagaggcgctgtacaag
tacacacacttcaacccaatccagacccaaatcttccatgttctgtaccacaccgactgt
aatgtcctcctcggggcgcctactggctctggtaaaacagtcgctgcagaaatggccata
ttcagggtgttcaaggaatacccaaaagcaaaggcagtgtacattgcaccactgaaagcg
ttggtgcgagagagaatggaggactggaaagtccgcattcaacagaagcttggcaaaaag
gtggtggagctgaccggtgatgtgaccccagatatgagggcggtggctaatgctgacctt
attgtgaccacgcctgagaagtgggatggggtcagtcggagctggcagaccagaaactat
gtgaaagctgtcgctgtactgatcattgatgagatccacctgctgggggatgagagaggg
ccggtgctagaagtgatagtctcgcgtactaactttatctcatcacatacctccaagcct
gtacgagtcgtaggcctgtcaacagcactggccaacgccagggacctggccgattggctg
ggtatcaaacagatggggctgtacaacttccgtccctctgtaagacctgtccctctggag
gtacacatcaatggtttccctggacaacactactgcccccgaatggccaccatgaacaag
ccaacattccaagccataaagtctcactcccctgagaaaccagtgctgatctttgtgtcg
tcacggcgacagacgcgattgactgctctagatctcattgctttcctggcagcagaagag
aacccaaaacaatggctgcacatggccgaaatggagatggagaatttgatctgtgggata
cgagacaccaacctgaaactgacattggcatttggaataggtatccatcatgcaggtctc
caggagcgtgacagaaaatcagtagaagagctgtttgtgaaccagaaaatacaggtaaga
ctggcattactggtaaaacagaaaatacaggtaagactggcattactggtaaaacagaaa
atacaggtaagactggcattactggtaaaacagaaagtacagatcattacaccaccacca
acacagtttctatctagtcggagtggctctgagaaaccttcaatcaaaagatcagagttt
gatgttctacagatgatggggcgggctggacgaccacagtttgatgacaatggagtggca
gtcattcttgtccatgatataaaaaaacatttctacaagaagttcctctatgaacctttt
cctgtggaatcaaacctacttgatgtgctacctgaccatctgaatgctgagattgtagca
gggacaatagcctccaaacaggatgcaatggactacatcacctggacctacttcttcagg
cggctcgtcatgaatccaagttactacaaccttgacgacacagactatgacagtatcaac
aagttcctgtctggcctggtggagaaggcactgtttgaactggagtcttcctactgtttg
gagattggcgaggataacaaggccattcgtccccagactctggggcgtatttcctcctac
tactatctcaaccacaactctgtacgcaagttccgccattctctgaatgctgagtgcacg
atcgaggatctcgtagaagttctctccagtgcagaggaatatgcccaacttcctgtgcga
cacaacgaggaccagattaacagtgaactggcgaccaaggtgccgctggcagttaatccc
cattcctacgagtcctcccacaccaaggcttgtctccttctacaggcccacttcagtcaa
ctctcacttccctcatctgattacaacacagacactaagtctgtcctggaccaggccatc
cgtgtactacaggccatgcttgacatctctgctgaccaaggctggttagtgaccacccta
cgcatcacaatcctgatccagatggtcatccaagggcgttggtcaaccgacaatgccctc
ctgactttaccacacatgacaccctaccatctcagctgtctcaggcctaaaggtggggag
ggtgccaggaggaagggttcagccatgcctaggggcccaatctcatccctcccagaactg
atagctgtgtgtgatggacggtatgagacacttcttactatgttggatggcgaaatggac
agaatgcaacttgaccagatgtacaccgtgataggaaagttacctcagatccaagtgaac
atttccataaagggttggtgggaaggaggtgaaggacaacaggatgtcagaatccatacc
tctaaagatggtgggcgtcgaccagacagtgactggataaaggtacatgctgaccaggag
tatgtgatacaggttgcccttactagggttaacaagaccaagaaaagcgacagtaaggcc
caggcaccacgttttcccaagcctaaagatgagggttggttcctagtgatcggcgagata
gagaacaaggaggtcatcgccctgaaacggactggttttgttcgtggacgctcccgtcta
cagatggcggtgtacaccccggagaccacagggcgtgttatctacacactgtaccttatg
agtgactctaacctcggtctggaccagcagtacgatatctgtctggatgtgatccccgct
agtatagagtctcaagtcaacacagaactggtcggtgagctaaatgacttagccttttaa
DBGET
integrated database retrieval system
