Mizuhopecten yessoensis (Yesso scallop): 110456545
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Entry
110456545 CDS
T05079
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110456545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110456545
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110456545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110456545
NCBI-ProteinID:
XP_021363019
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAAVEAPAAPAVTEDDEAWLYGDENKEGTPTNGDAAEPVEGAKDEKKDDREAGELSGEEE
SQEKDDDDDSDDDVQVTIGDIQTFPLNEAPRNLFKAQSGYQKPAGAAAAAKSQSGTGTTV
KGVDLDTPGNINGVNQYEFDLDGLQADEKPWRKPGADITDYFNYGFNEDSWRMYCEKQRR
NRMEANPGTVTRIYVHQSASSMNRNEKKDALHPPGTETPQTVPVIGSRGKTNPTPRKMAG
TIDVIGSTARDSRRPDASSMGDPIPVAGSRKSYNTSVPPPGISVHPTQGMPPMPDYSIPP
PGMTLPPGMHPPPGPAPPGVPPGIPPPGFPPVEFDAYYPPTGQTSVSHYDDRNFSSHPTF
PSNYNQANPWENNRQEGYRWGSDYSRERSPARSESEYSRDTYWRDRGDRDTYRERDRSRS
RERDRSRDHRHRDEKHRSRRKHREDEDSDHHRSKHKKSKKSKKDKDDDAYDPSNPSQDDN
AKGD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggttgaagcaccagccgcgccagccgtaacagaagatgatgaagcctggctc
tatggagatgaaaataaagagggaactccgacaaatggtgatgctgcagagccagtagaa
ggtgccaaagatgagaaaaaagatgatagagaagcaggagagttgagtggtgaagaggaa
tcgcaggagaaagatgacgatgatgattctgacgatgatgttcaagtgacaattggcgac
attcagacatttcctcttaacgaagctcccagaaatttattcaaagcacaaagtggttac
caaaaaccagctggggcagcggccgctgcaaagtctcagagtggcacaggaaccactgtg
aaaggtgtggaccttgatactccgggaaacatcaatggagtgaaccagtacgaatttgat
ctggacggattacaagctgatgagaagccctggaggaaaccaggtgcggacatcactgat
tatttcaactatggcttcaatgaagactcgtggcgtatgtattgtgaaaagcagagacga
aaccgaatggaggccaacccaggaacagtcactagaatttacgttcatcaatctgcatca
tctatgaatagaaatgaaaagaaggatgcattacaccctccaggtacagaaactccacag
accgtgcctgtgattggctctcgtggtaagaccaacccaacacccagaaagatggccggg
accattgatgttattggcagcacagccagagactcgagacgtccagacgcttcatctatg
ggagacccaataccagtggctggtagcaggaagtcctacaacacctctgtgcctcccccg
ggtatatctgtacaccccacccaggggatgccccccatgcctgactactccataccccct
ccgggcatgactctgccaccaggcatgcatcctcctccagggccagcacccccgggtgtt
cctcctggtataccacccccaggatttcctccagtggaatttgatgcctactacccgccc
acaggtcagacttctgttagtcactatgatgaccggaatttttcatcccatccaactttc
ccatcaaactacaatcaggcaaatccctgggaaaacaatcgccaggaaggttaccgatgg
ggaagtgactacagcagggagcgtagtccagcgagatccgagtcagaatatagcagggat
acatactggagagaccgaggtgatcgggacacctacagagagcgtgacaggtcaaggtca
cgtgaacgagataggtctagagatcatcgccatagagatgaaaaacacagatcaagaagg
aagcacagagaggacgaggattctgatcaccatcgctccaagcacaagaaaagtaagaaa
tctaagaaagacaaggatgatgatgcttatgacccatctaaccccagccaagacgacaat
gccaagggagattag
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integrated database retrieval system
