Mizuhopecten yessoensis (Yesso scallop): 110456758
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Entry
110456758 CDS
T05079
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myi04121
]
110456758
Enzymes [BR:
myi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110456758
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
U-box type E3
110456758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-CCHC
zf-C3HC4_2
U-box
zf-CCHC_3
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110456758
NCBI-ProteinID:
XP_021363379
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MACIHFKFKNSLDYDSVTFDGLHISLGDLKKAIMQRKRLKDTDVDLHIVNAITKKAYQET
EEMIPKNTSVIVSRIPLANAVKPSGPKTLNAYPKDEPRSKPAAPMPEVGAQERQNQSVDL
VNANISEEDKIKAMMYQSTKDFDPTNYMKSKYPAGKPSTSYLCFKCGKPGHYIHNCPNKP
EVDPEDPTAKPQEVVNTSRIKRSTGIPTSFLTPCNDKHSPGALLMSTGQYAVPIIDKEAF
QKGKKERPPFMPLPSVEKQEESPVPNELICPLCHDLLKEAVVIPCCGNSYCDECIRDALL
EDDNHCCPSCNEMDSSPDKLIANKFLRTAVTNFHNETGYTTVKRRHMEAKMEQLKQQQQR
EHHFKEQQKQRELQKKQQEEQRANKTRSRMESPPPPPPPRSDPTPCITVKTSPEGPQNSS
KPITPTTLTPVKDEREPPWPTDDQPKTVPVIGQKVPSNPNRNTPPPSAGPITVHASGPPS
HVRGPANSESGLHPSIPATPNFRHPAIPNGPVRHPPTFPPPGIAPSQVPVLNTALPPPRL
PIPSGMPPYPPHPGVPGSAPLPFPPPRGPFPLPMVGPQPMTKEEFYRTKQEMLRDDLNPE
VMVDYRLKLMEYRLNQRKRRSISRSLSPRRSRSRSRSRSRSRYRSKTPPLRRKTRSRTRS
RTRTRSRSRLKYSRSPPPRRIRSRTRSRSRSRLRSRTRSRSRSISKPRRLRSRTRSRSRY
RSKTPIRYRTRSRSRSWSRPPPPKYRARSRSLTPRRRSRTRSRTRSPLPRYNSWSKSRSR
SPKYKRSSPGYLPPRRSRSPPPRFQRSPPPYYRDDFYRPPSGNWSPPPKGFRSPPQGRQG
FSPPRYPGQPPPYYGQRPEDPYRAYEQYYIDFYGYPPPLPPPPGSGPGPRPGPGPGPGPR
PGPGPRPGPGPGPGPGLGPGPGQYDIPYYNKQPYRPRSKSPRGRMESRGRSPRGRGQGRG
QSDRPGPKWDNSKPGKNDSKQETKNKDEKEDKKKVQKRSQEKSKTHKDQEDKKAKNKTTD
TKKEKTVKSKKTKEVGQKIEVVTGVKKSSGVGLATMAKKSIPSKGVANVAKKSQLEKSDE
KINKKSHREKISETGSRKSQPEKREEATAKKPYRDKVEDKEKVKSSSQEPQINKENKIPA
KKKIKPKQKDKSEDDSEQEVGNISKRKMLKKIEIKQEPRDDSDFENPVGKVSVKKERGRL
PEDGEEPPKRIKKEKFKESEEKELGDDEPPKRVRKEKSDAHRQHQKEKPHIKRSKVKNSE
SDATQSDSAPEGEKIRRKIKTKRVSEIEKKGNEVVEEEESPAKRRKIDHEQEPDYEKSNK
SDKQRHKEIKENKLVSKSDSKKSRISREDSSERKSSVSREEGSKSPSESKKSRRARDSQL
EDKAAKEGGKSRGSHKDQQTSKVESVKSRISREDHPGPKSVVESKLRRSREEELMLSPPE
LSKWEREDYLSDRSPEPRRRHKHQHEKQSLPRSVIESAEKAISQKQVKSMVASAVVLSPP
NKNPRRVFVDRDREEATSRDRERDNSRRDDGKPDESRREDNRKVLSRQRSMQITISAPDK
RKFSESEDLREKLASSEDLREKPREDLREKLSNRKVSRYKEEKEGTLRSLKDDSRKEESV
SGGGKGSKHHEDRRDVERSNVEKVYHKESDNKKHHSSKSAPSASQKVSKEKTPKLEIKKE
EETKPEESSKIKYRKESLIDEATFEPDYNEESSAEEEVEKNDKAKASSAEEGEADDDDEE
DEEEEDGDTKSKKHKHKKGKHKKNKKHKHKHKKKKHKKNKEEKESQDKE
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcatacacttcaagttcaagaacagtcttgactatgactctgttaccttcgat
ggactccatatttctcttggggacctgaagaaggctatcatgcagaggaaaagacttaag
gacaccgatgttgatcttcacattgtcaatgccattacgaagaaagcataccaggagaca
gaagagatgattccgaagaatacctcggtgatcgtctccagaatccctttggccaatgct
gtaaagcccagtggcccgaagacattaaatgcttaccccaaggatgaaccaagatcaaaa
ccagccgccccaatgccagaagttggagcccaagagcgtcaaaatcagtctgtggatctt
gtcaacgctaacatctcggaggaagataagataaaggccatgatgtaccaatccactaaa
gactttgaccccacaaactacatgaagtccaagtaccctgcaggaaagccctctacttcc
tacctctgcttcaagtgcggcaagcctggccactacatccacaactgtccaaataaacca
gaagttgacccagaggatcctacagccaaaccgcaggaagtagtcaacacaagtcgaatc
aaacgctccacgggtatcccgacaagttttcttacgccctgtaatgacaaacattcaccc
ggagctctcctgatgtcgacaggacagtacgctgtccccatcattgacaaagaggcattc
cagaagggcaagaaggagaggccgccgttcatgcccttgccatcggtagagaaacaggag
gaatcccccgtaccaaacgagctcatctgtccactgtgtcacgacctcctgaaggaagcg
gttgtgattccttgctgcggtaacagttactgtgatgaatgtatccgtgatgcactgtta
gaggacgataaccattgctgtccatcctgcaatgagatggactcctcaccagataaactc
atcgccaataagttcctgcggacagcggttaccaatttccacaacgagacagggtacaca
actgttaagaggagacacatggaggccaaaatggagcagttaaaacaacagcagcagcga
gaacatcattttaaagaacaacagaagcaacgtgagctacagaagaagcaacaggaggaa
caaagggctaacaaaacaaggtcaaggatggagtcacctccacctccacctcctccccgc
tcagacccaactccctgtattacagtgaaaacctcaccagagggaccccaaaactccagt
aaacctatcacccccaccacgttgacgccagtcaaggatgagagagaaccgccgtggcca
acagacgaccagcccaagaccgtgccagtgattggacagaaggttcccagtaatccaaac
agaaacaccccaccaccctcagctggacctataactgttcatgcctctggaccgccatct
catgtcagagggcctgcaaattcagagagtgggttgcacccaagcattcctgctactcct
aattttcgacatcctgccatacccaatggaccagtgaggcaccctccaactttcccacct
ccaggcatcgccccttcacaagtgcctgtactaaatacagctttacctcccccgcgtcta
cccataccgtcagggatgccaccatatcctccccatcctggggtacctgggagcgcaccc
ctgccatttccaccgccaagaggcccttttcctttacccatggttggaccacagccaatg
accaaggaggaattttacagaacaaaacaggagatgttgagagacgacttgaaccccgag
gtcatggttgattaccgtttgaagttgatggagtacagacttaatcagaggaagcgacgc
tccatatcaaggtcgctgtcaccaagaagatcccgctcaaggagcaggagtcgcagtcga
tcaagatacagatcaaagaccccacccttacgaagaaaaacaagatctagaacccgctca
aggacccgtactagatctcgttcaaggctgaagtactcgcgcagtccaccccctcgtcgc
attcgatcaagaactcgttcaagatcaaggtcaagattaaggtctaggacacgttcaaga
tcacgttccatttccaagccaagaagattacggtcccgaacacgatctagatccagatac
cgttccaagacacctattagataccgaactaggagtaggtcaaggtcgtggtcacgacct
ccgcctccaaaatatcgggcaagatcaagaagtctaacaccgaggcgaagatcacgtaca
cgttcacgtacaaggtcgcccctaccaagatataatagctggtccaaatcacgttctcgc
agcccaaagtacaagcgcagctctccaggttaccttcctccccgaaggtcaaggtcacca
ccgcctcgctttcagcgatctcccccaccatattatagggatgacttctatagaccgcca
tctggtaactggtccccaccccccaagggcttcagatctccaccccagggaaggcaaggc
ttttctccaccaaggtacccaggtcaacccccaccttactatggtcagcgaccagaggat
ccctatagagcctatgagcagtattacatagacttttatggatacccaccaccactaccc
ccacccccagggtcagggccagggccaaggccaggaccaggaccagggccagggccaagg
ccaggaccagggccaaggccaggaccagggccaggaccagggccaggactagggccaggg
ccagggcagtatgacattccctactataacaagcaaccgtacagaccacgatctaagtca
cccaggggccgtatggaatcgagaggcagatccccaaggggtaggggtcaaggcagaggt
cagtcagatagacctggaccaaaatgggacaacagtaaacctggcaaaaacgacagcaag
caagaaactaaaaataaagatgaaaaggaagataaaaagaaagtacagaaaagatctcaa
gaaaaatccaaaacacacaaggatcaggaggacaaaaaggccaagaataaaactacggac
accaagaaagaaaaaacagttaaaagtaaaaagacaaaggaggttgggcagaaaatagag
gtggtgacaggtgttaaaaaatcatctggtgtagggttagcaaccatggcaaagaaatcc
ataccatcaaagggggtcgcaaatgtggcgaaaaaatcccagctggaaaagagcgatgaa
aaaataaataaaaaatctcatcgagagaaaatttcagagacgggtagtcggaaatcgcaa
ccagaaaaaagagaagaagctactgcaaaaaaaccatacagagacaaggtggaagataag
gaaaaggtgaagtcttcatctcaagaaccacaaatcaataaagaaaataaaattcccgca
aagaaaaagatcaaacccaaacagaaggataaaagtgaggacgattcggaacaggaagtg
ggaaatatttcaaaacgaaaaatgttaaaaaagattgagataaaacaagaaccaagagat
gattcagattttgaaaatcctgtgggaaaagttagtgtaaaaaaggagaggggaagactt
cctgaggatggagaggaaccaccaaaacgaataaaaaaagaaaaattcaaagagtctgaa
gagaaagagttgggtgatgatgaacctcctaaacgagtcaggaaggaaaaatctgatgct
cacagacaacatcaaaaggagaagccacatataaaaagatctaaggtgaaaaattcagag
tctgatgctacacaaagtgattctgcccccgaaggtgaaaagattcgccgtaaaataaaa
acaaaaagggtatcagagatagagaaaaagggaaatgaggttgtagaggaggaagagagc
ccggctaagaggcgaaagatcgatcatgaacaggaaccagactacgaaaaatcaaacaaa
tctgataaacagagacataaagaaatcaaggaaaacaaacttgtatccaagtcagacagt
aagaaatcaaggatttcacgggaggattcctcagaacgaaagtcatcagtgtccagggag
gaagggtcgaaatccccttcggaaagtaaaaaatctcgcagagctcgggacagtcagttg
gaagacaaagcagcaaaggaaggagggaaatcccgaggatcccacaaggatcaacaaaca
tctaaagttgaaagtgtcaaatctcgaatatcacgagaggatcatcctggcccaaagtct
gttgttgaaagcaaactgcgcaggtcgagggaggaggaactcatgctgtcgccccccgaa
ctgtctaagtgggagagagaggactacttgagtgaccgttctcctgaaccgaggagaaga
cataaacatcaacatgagaaacagtcattaccaaggtcggtcatagaaagtgcagaaaag
gccatatctcaaaaacaggtgaagagcatggtagcatctgctgtggtactgtcccctcct
aacaaaaatcctcgtcgagtgtttgtggatagagacagggaggaggcaacctcacgcgac
agggagagggacaacagtcgtcgcgatgacggcaagcctgatgagagtcgacgagaggac
aacagaaaagttctgagcaggcagaggtcaatgcagatcacgatatctgcaccggataaa
cgcaagttctcagaatctgaggacttgcgggaaaagcttgctagctctgaggacctgaga
gaaaagccccgagaggatttacgagagaaactttctaataggaaagtcagcagatacaag
gaagaaaaggagggtacactgagatcactcaaggatgattctcgtaaggaggaaagtgtc
tctggtggtggtaagggcagtaagcatcatgaggataggagagatgttgaacgctccaat
gtggagaaggtctatcacaaggaatcggacaataagaaacatcacagcagtaagtccgct
ccctctgccagtcagaaggtgtcaaaggagaaaacacccaagctggagattaagaaagaa
gaagaaactaagccagaggaatcgtctaaaatcaagtacagaaaggagtcgttgattgat
gaggctacgtttgagcctgattataatgaggaaagctcagcagaagaggaagttgagaag
aatgataaggctaaggcaagttctgcagaggagggagaggctgatgacgacgatgaagag
gatgaggaagaggaggatggtgatacaaaatccaaaaaacacaaacacaaaaaaggcaag
cacaaaaagaacaagaaacacaaacataaacacaagaaaaagaaacacaaaaagaacaag
gaggagaaagaatcccaggacaaggagtga
DBGET
integrated database retrieval system
