Mizuhopecten yessoensis (Yesso scallop): 110456771
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Entry
110456771 CDS
T05079
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110456771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110456771
Enzymes [BR:
myi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110456771
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110456771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_double
Motif
Other DBs
NCBI-GeneID:
110456771
NCBI-ProteinID:
XP_021363401
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MVKEQFREADVAKKISHVTFGLLNSHQMQQMSHLHVVSKTLYNQDGSRKPVPYGVLDHKM
GTSEKDNNCDTCGKGLADCTGHFGYIDLELPCFHIGYFRAIINVLQMTCKECSEILLQSE
VKTNFLESIKRPLTYLQSKAMKKKIYEKCRKVSICPSCGAYNGMVKKCGLLKIIHDKYKT
GHKGNEIIRSDFLSSFQDAVEHDREIEPLLNKTQVILNPVMVLKLFQRISDDNMPLLMMN
SDIARPEDLILTRVLVPPICIRPSVLSDLKSGTNEDDITMKLTEILFLNDVIQKHKATGA
KMYMIMEDWDYLQLQVALLYNSETSGIPLHMQPKKSTRGFVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNMRIDQVAVPIHVAKVLTYPERVNKANIKMLRKLVKNGCDVHPGANFI
VQRNHIKRFLKYGNREKVAKELKYGDIVERHLIDGDIVLFNRQPSLHKLSIQAFYAKVMP
HRTFRFNECCCNPFNADFDGDEMNLHLPQTEEAKAEAITLMGSKSNIITPRNGEPLIAAI
QDFITGAYLITQKDVFFDRARTCQLISAMLSGNDSQMKIDLPPPCILKPCNLWTGKQIFS
VLLRPNKDYPVKANLRTRGKNYSSGEDLCYNDSFVVIRNSEHLCGAMDKGTLGSGSKNNI
FYVILRDYGEQYAADALVRLARLCPAFLSNRGFSIGIGDVTPGAGLVKAKNLLLEDGYSK
CDGYIRDLHEGRLQTQPGCTEEETLEACILKELSVIRDHAGKACLRELHKSNSPLTMAIC
GSKGSFINISQMISCVGQQAISGKRTPNGFEDRALPHFEKHAKDPAARGFVENSFYTGLT
PTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSHYDLTVRSSTGDIVQFLYG
GDSLDPACMEGKDTPIDFKRVFDHIRANTRVSCHGEKSLGGQKLVQLVKQKLSTNVYQTC
STEFKNDLIDFIQKVGDGIDKTRQRFGVLDGKEQRLPTVLFEMDRVTENQIDVYLNCCKH
KFMRAQIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKII
STPIITAQLEVDNDAEFARVVKGRIEKTTLGEVSEYMEEVFLPDDCFILIKLDLERIRLL
KLEVHADSIKFAICSSKLKVKPQHIQIHSEAVITVQPNETSKSSMYYVLQTLKKELPGVM
IKGIPSVTRAVIHIDEGSTEQYKLLVEGDNLRAVIATPGVKGSHVSSNNTLEVEKTLGIE
AARTTIMNEINYTMSSHGMSIDIRHVMLLADLMTFKGEVLGITRFGLAKMKESVLMLASF
EKTADHLFEAAYHGQKDTINGVSECIIMGIPMGIGTGLFKLLHKAEKDSKPRRRPLVFDR
TEFHLPMVS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattccgagaggccgatgtggctaagaaaataagccatgtgaccttc
ggattgttgaactcccaccaaatgcagcagatgtcccacctgcatgtagtcagtaaaact
ctttacaaccaagatggcagccgaaaacctgtaccatatggtgtgcttgaccataagatg
ggtacaagtgagaaagataacaactgtgatacatgtggaaagggactggcagattgtaca
ggacactttggatacatcgacctggagctgccctgcttccatatcggatatttccgggcc
atcattaatgttctgcagatgacatgcaaggagtgcagcgaaattctgcttcagtccgag
gtaaagaccaactttctagagagcatcaagcggccactcacctacctccaatctaaggct
atgaagaaaaagatctatgaaaagtgtaggaaagtgtccatttgtccgtcctgtggagca
tacaatggtatggtgaaaaaatgtggtttgttgaagatcatccatgataagtataagact
ggccacaaaggtaatgagatcatccgttccgacttcctatcatcctttcaagatgcagtg
gaacatgatagggaaatagagccacttctgaataagactcaggttatactgaacccagtc
atggtgctcaagctgttccagagaatttctgatgataacatgcctctgctgatgatgaac
tcggacattgctcgacctgaggatctcatcctaacaagagttttagtgccacccatttgt
attcggccatctgttctctctgatctcaaatctggaaccaatgaagacgatatcacgatg
aagctgaccgagatattattcctgaatgatgtcattcagaaacacaaggcaacaggagct
aagatgtatatgataatggaagactgggactatctacaactacaggtggcactgttatac
aacagtgagacatcaggcattcccctacacatgcagccaaagaaatctacaagaggtttt
gtgcagagactgaaagggaaacaaggacgttttcgtggaaatctttctggcaaaagagtt
gatttctctggcagaactgtgatttcccctgacccaaatatgagaattgatcaggtggcg
gtacccatacatgtcgccaaagtgttgacgtacccagagcgtgtcaataaagccaacatc
aagatgttacgtaagctggtgaaaaacgggtgtgacgtccacccaggagccaactttata
gtgcagaggaaccacatcaaaaggtttctaaaatatggaaatcgagagaaagttgcaaaa
gaactaaagtatggtgacattgtagaacgtcatctgatagatggtgatattgtgctgttt
aatcgacagccctccctccacaagctcagcatacaagctttttacgcaaaagttatgccc
catcgaacattccgtttcaacgagtgttgctgtaaccccttcaatgctgactttgacggt
gatgagatgaacttgcacctgccacagacagaggaagctaaggcagaggccataactttg
atggggtccaaatcgaacatcataacaccgagaaatggtgaaccattgatagctgctata
caggatttcatcacaggtgcctaccttattacccagaaagatgtattctttgatcgtgct
cggacctgtcagctgatctcagccatgttatcagggaatgatagtcaaatgaagatagat
ttacctcccccctgtatcttaaagccatgtaatttgtggactggcaaacagatcttcagt
gtactgttacgaccaaacaaggattatccggtgaaggctaaccttcgtacccgtggaaag
aactactcatcgggggaggatctctgttacaacgactcttttgtggtcatccgtaacagt
gaacatctgtgtggggcaatggacaaaggaacgctcggctccggctctaaaaacaacatt
ttctatgtgatcctgagagactacggtgaacagtatgctgctgacgccctggtacgcctg
gccagactctgtccagctttcctcagtaaccgagggttttccattggtattggtgatgta
acaccaggagctggactggtcaaggcaaagaacctacttctggaagatggatattcaaag
tgtgacggttacattcgtgacttgcatgaaggaaggctacagacacagcctggctgcact
gaggaggaaacgctggaggcttgtatcctaaaagagctctctgtgatccgagaccacgct
gggaaagcttgtctacgggaactacacaaaagcaacagcccccttaccatggccatctgt
ggctccaagggttcgttcatcaacatctcccagatgatatcctgtgtaggacagcaggcc
ataagtgggaagaggacacccaatggctttgaggatcgcgctctgcctcactttgaaaag
catgccaaggacccagcagcacgtggtttcgttgagaacagtttctacaccggcctgaca
cccacagagtttttcttccacacgatggcaggtcgagagggtctggtggacactgctgtc
aagacagccgagactggctacatgcagcggcgactggtgaagtcacttgaagacctgtgt
tcccactacgatctgacagtcaggagttctacaggagacattgtccagttcctgtacggt
ggggacagcctcgacccagcatgtatggagggcaaggacacacccatagacttcaaacgt
gtgtttgaccatatcagggcaaatactcgagtgagttgtcatggagagaaatccctcggt
ggtcagaagctggttcagctggtaaagcagaaattatctaccaatgtgtaccagacctgt
agtacagaattcaagaatgacctcatagacttcatacagaaggtgggtgatggcattgat
aaaaccagacaaagatttggtgttcttgatggaaaggagcagagacttccaacagtgctg
tttgagatggacagggtaactgagaatcagattgacgtctacctgaactgctgcaagcac
aaattcatgagggcccagatagagccaggaacagcagttggagcagtgtgtgcacagagt
attggagagccaggcacacagatgactctgaagacatttcacttcgctggtgttgcttcc
atgaatatcacacagggtgtgccaagaattaaggaaatcatcaatgcctccaaaatcatc
agtacgcccatcatcactgcccagttggaggtggataatgatgcggaatttgcacgtgtc
gtcaaggggcgcattgagaaaacaacgctaggagaggtatcggaatatatggaggaagta
ttcttgccagacgactgtttcatactaatcaaacttgatttagaaaggatacgcctgctc
aagctggaagtgcatgcagacagtatcaagtttgccatatgtagctctaagctcaaagta
aaaccacagcacatccagattcacagcgaggctgtaatcacagtacagccaaatgagacc
tccaagagctccatgtactatgtcctccagacactgaaaaaggagctgccaggggtcatg
atcaagggtatcccatcagtgactagagctgtgatacacatagacgaggggtcgacagag
cagtacaaattactggtagagggggacaatctccgggctgtcatcgccaccccaggtgta
aagggttcccatgtgtcctccaacaatacactggaggtggagaaaacgctgggcatcgag
gctgctcgaaccaccatcatgaatgaaatcaactacacaatgtcaagtcacggcatgagt
atcgacatccggcatgtcatgctcctagctgacctcatgacctttaagggtgaggtttta
gggattaccagatttggattggcgaagatgaaggagagcgtcctcatgctggcttcattt
gagaaaacagcagaccatttgtttgaagctgcctaccatgggcaaaaagacacaatcaat
ggtgtgagtgaatgcatcatcatgggaatcccaatgggtatcggcacaggactgttcaag
ctactacacaaagcagagaaggactccaaacctcggcgacgcccacttgtctttgacaga
acagagtttcatcttccaatggtatcgtga
DBGET
integrated database retrieval system
