Mizuhopecten yessoensis (Yesso scallop): 110457457
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Entry
110457457 CDS
T05079
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110457457
03016 Transfer RNA biogenesis [BR:
myi03016
]
110457457
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110457457
Spliceosome [BR:
myi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110457457
Transfer RNA biogenesis [BR:
myi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110457457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
110457457
NCBI-ProteinID:
XP_021364421
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MTAFEEMGVMSEIGQAVEEMDWTLPTDVQSEAIPMILGGGDVLMAAETGSGKTGAFCLPI
MQIVYETLKDQEEGKGRKVSSKTAASGGSNWKMNMHDRGDAMAIGPEGLLCQARDQQKWH
GTRSNKAITQQGRYYFEATVTDEGLCRVGWATDKATLDLGTDKFGFGFGGTGKKSWGRQF
DSYGEPYGMNDTVGCYLDIDNAEMRWSKNGVDLGKAYDIPPHLRSEKFYAAVTLKNAEME
FNFGKTPFKFPPGKNFVGLAQAPSQCVVQSRISSGVAVSAKPAPNAPQAIIIEPSRELAE
QTFTQIQKFKVHLSNPTIRELLIIGGVNVKDQLDVLQRGVDIVVGTPGRLEDLISTGKLL
LHQVRFFVLDECDGLLSQGYSDLINRLHQQIPKVTNDGKRLQMVVCSATLHSFDVKKMAE
RLMYFPTWIDLKGQDAVPETVHHVVCRIDPTQDTRWKNLQRHVATDGVHQNDNISANGTS
QETYSEAVKKLKGEYLIKALEEHKMDQALIFCRTKLDCDNMEKYLLQKGGRNFSCVCLHG
DRKPQERKANLQKFKDKGVKYLICTDVAARGIDVGGLQCVINVTLPDEKQNYIHRIGRVG
RADRMGLAISFVSTVKEKVWYHSNCNNRGRGCYNTSLTDHGGCCVWYDEPKLLLDIQEHL
DITIETVEPDLKVPINEFDGKVIYGNKRKNAGSSYQGHVDSLAPAVKELADLEKRAQTSF
IDLKNNKRFMTR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacagctttcgaagaaatgggcgtcatgtccgaaattggtcaggcagtggaagaaatg
gattggactttaccgacagatgtacagtccgaagctatacccatgatccttggtggcggt
gatgttcttatggctgctgagactggaagtggtaaaaccggagctttctgtctcccaata
atgcagattgtgtatgaaacccttaaggaccaggaagaaggaaaaggaagaaaggtctcc
tctaaaactgcagcatctgggggaagtaactggaagatgaacatgcacgaccgaggagat
gctatggccattggtccagaaggactgttatgtcaggctcgggatcaacagaaatggcat
ggaacacgctccaataaagccatcacacagcaaggtcgctactactttgaggcaactgtc
acagatgaggggctgtgtcgtgtgggatgggcgaccgacaaggccacactagacctcggc
acagacaaattcggctttggtttcggtggaacaggcaagaagtcctggggcagacagttt
gacagttacggagagccttacggtatgaacgataccgtcggttgttacctggacatagac
aacgcagaaatgcgctggtccaaaaatggagtggaccttggtaaagcctacgatattcca
ccacacttgagaagtgagaagttttatgctgcagtcactctgaagaatgctgaaatggag
ttcaactttggtaaaacaccgttcaagttccctccaggcaagaatttcgtgggtttagcc
caggccccttcgcagtgtgttgtacagtccaggatttccagtggtgtagcggtcagtgcc
aagcctgcccccaatgccccccaggccatcatcatagagccttcaagagaacttgcagag
cagactttcacacagatccagaagtttaaagtccatctgtctaacccaaccattagggag
ctactgattattggtggtgtcaatgtcaaggaccagttggacgtcctgcagaggggggtg
gatatcgtcgtgggaacccctgggagactggaggacctcatctcaacaggcaagctgctg
ttacaccaagtccgcttctttgtccttgacgaatgtgatggccttctgtctcaagggtac
agtgacctcattaacagactacaccagcagattcccaaggtcactaatgacggcaaacgt
ctacagatggtcgtctgctcggcaacactccactcgttcgatgtcaagaaaatggcggag
cgtctgatgtacttccccacatggatagatctgaaaggtcaggacgcggtgccggagact
gtccatcacgtggtgtgcaggattgacccaacacaggacacaagatggaagaacctacag
cgacacgtagccactgacggtgtccatcaaaacgacaacatctccgccaacggaacatct
caagaaacctactcggaggctgttaagaagctgaagggagagtatttgataaaggcgttg
gaggaacacaagatggaccaggcccttatcttctgtcgtacaaaacttgactgcgataac
atggagaaatacctcctgcagaagggaggtcgtaatttctcctgtgtttgcctacacggt
gatcgtaaaccacaagaaagaaaggccaatttacagaaatttaaggacaagggagttaag
tatctgatatgtaccgacgtagcagcaagaggcatagatgtaggcgggctacaatgtgtg
atcaatgtgactcttcctgatgagaaacagaactacatccatagaattggtcgtgtgggt
agagccgataggatgggactcgctatctcttttgtttccactgttaaagaaaaggtgtgg
taccactccaactgtaataaccgtggaagaggctgttacaacacaagtcttactgaccac
ggtggctgctgtgtctggtacgacgagcccaagctcttgctggacatccaagaacacctg
gacatcaccatagaaacagttgagcctgacctcaaggtccccattaacgagtttgatgga
aaagttatttatggcaacaagaggaaaaatgcagggagctcttatcaaggacacgtggat
tcactggccccggcagtcaaggagctcgctgacctcgagaaacgggcacagacgtcattc
attgacctcaaaaataacaaacggttcatgacacgatga
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