Mizuhopecten yessoensis (Yesso scallop): 110458301
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Entry
110458301 CDS
T05079
Name
(RefSeq) RNA-binding protein 26-like isoform X1
KO
K13192
RNA-binding protein 26
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
myi01009
]
110458301
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110458301
03041 Spliceosome [BR:
myi03041
]
110458301
Protein phosphatases and associated proteins [BR:
myi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110458301
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110458301
Spliceosome [BR:
myi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110458301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup35_RRM_2
PWI
RRM_1
zf-CCCH
RRM_PARP14_3
RRM_Nup35
zf_CCCH_4
zf-CCCH_2
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110458301
NCBI-ProteinID:
XP_021365623
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MIVENLDALKIWLTNTLTPICDADPDPLAKYVVALLKKDKTEKELEAVFLDQLDVFLQSK
TKDFVASFFRVLEDKSYIPPPPLPPTSVAIKTEAVPDSTTTQATTTLLKPADIKEEVNKE
PVESEDKASKDSKEKDAKQRRNRTASQEKRDLEEKQRRRDRFGPVDHAVTRVVRGQDRLD
RPDRPDRPDRPDRPDRPDRPDRGPGDRRYYRRRSRSRSPRRFSRSPLRSRSPFRRRLRSR
SRSPYRARSWTPLSRSRSRSWTPRSRSRSRSRSRSRSRSRSRGMRPQPDSRGSTPTLDNG
RYSHSIPAVGGGVYSMAHGDRCLTTDSAGREIRPRCKDYDEKGFCMRGDLCPFDHGLDPV
IVEDVPIPSVGMPFPPRGPPPPTSNSTNLPPGSGPMVSGPRFMPPTHGPPPGMPRMGMGP
GPRPPPPRLENFEVYNPEAPGINRPHGPGLPPFWNGPRGPPPGMGRGGPPPNFLSGPPPP
LPPNPNRRDHLVSIPTLPQAEEVKEEEEAALAPPGTEPVSKPVVVEKPTERTVIAPKRAF
NSSQGPGQGQSNQYDSQNRYTGNQYGGQNRYGPSQAKKPFDYNRVGGYRRPDIDMSNTTL
QVTKVPKDCCNIVKVNEHFSKFGNLTNIKIGYNAHDTILISYSTNAEALAAYRCSDPVFN
NRFIKLFWHKPEKEQGQNQPDSSENSGNKAAGSGDFRNVQHASAKSRLGAVIPPASKLSL
NNLKKPPTTQAVVATDGEASLSTDTRDFNKEKTLVYTSSVGNITKTVYNPEAIKAKTVLT
SPTAVQTASFVFKIEAIKRQEALKKEAMKKKIEIQKQKHDLLQKQLEHQKVLIQKLEKTK
NMSAEDKETVMKTLKILECSIVKLKVELVPKKPVVDPAMLKSPELARKEILDTELELFTK
QSTGEDTSNLKQKLNELTKQASAMGLLGRGRGRGVPRGRGSTTWVASGLRGRGRAQRGRG
RGSGFPPGGNRTLDKRPKMVEVSGFDLEEKDGIHSHFSQFGTVEKVEFDEESQSAIISFQ
TRMDAEMAVLRGSKFNNTVLAMKWYIEPKVVLNLNISSDDSFVGEDPAEEVSLVDDEIDE
DALLAGDDDEEEDEESRSWRR
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcgaaaatctggacgcgttgaaaatctggctcaccaatacgttaactccaata
tgtgatgctgatccagacccccttgcaaaatatgtagtagctctccttaaaaaagacaaa
acagaaaaggaacttgaggcagtatttctagatcagttagatgtttttctccaaagcaaa
acaaaagattttgttgcatcatttttccgtgttttggaagacaaatcgtacattccacca
ccaccactaccgccgaccagtgttgctattaaaactgaagctgttccagacagtacaaca
acacaagcaaccactaccctactcaagccagcagacatcaaggaagaggtcaataaggag
ccagtagagagtgaagataaagcatcgaaggacagtaaagaaaaagatgccaaacagcgt
cgcaacaggacagctagtcaggagaaacgtgatttggaggagaagcaacgaagaagagac
agatttggacctgtagatcatgctgtgaccagagtagtcagaggtcaagatcgcttggac
cgacctgacaggcctgaccgacccgacaggcctgaccgacccgacaggcctgaccgtcca
gacagaggtccaggggacaggcgatactacagacgaaggtcaaggtcgcgcagcccaagg
agattttccagaagtccccttcgatctagaagtccattcagaaggcgtctacgctcaaga
tcaagatctccatatagggcaagatcatggacaccactttcaaggtcaagatcaaggtca
tggactcctcgctcaagatctaggtcacgctcaaggtcaagatctaggtcacgctcaagg
tcaagaggaatgagacctcaaccagacagtcgaggatcaacacccaccttggacaatggg
agatacagccacagtatccctgccgtagggggtggagtgtactctatggcccacggggac
cgctgtctcaccacagacagtgcaggccgtgagatacgtcccagatgtaaagactatgac
gagaaaggtttctgtatgcgaggagatctgtgtccttttgatcacgggctggacccagtt
atagtggaagatgtccctattcccagtgttggaatgcctttccctccccgaggaccaccg
ccgccaacaagtaacagcacaaatctgccccctggatctggccctatggtgtctggcccc
cgatttatgcctcccacacacggtccaccgcctggcatgcccaggatgggaatggggcct
ggaccaagacctccacctccaagactagaaaactttgaagtgtacaatcctgaggcacca
ggtattaacagacctcacggtcctggactacctcctttctggaatggccctcgaggaccc
ccgcctggaatggggagaggtggaccaccgcccaacttcctgtctggtcctcccccacca
ctaccccctaacccaaacagaagagatcacctagtcagcatccccaccctccctcaggca
gaggaagttaaagaagaagaggaagctgctttagctccccctggtacagaacctgtatcg
aagccagttgtcgtagaaaagcctacggagaggacagtcattgctccaaagagggcattc
aactctagtcagggtccaggtcagggtcagtccaatcagtatgatagtcagaaccggtac
acagggaaccagtatgggggccagaatcgctacggtccttctcaagccaagaaaccgttt
gactacaatcgtgtaggaggttaccgaaggcctgacattgatatgtccaatactaccctc
caagtcacaaaagtgccaaaagattgctgcaacattgtgaaagtcaacgaacacttctcc
aagtttggcaatctaacaaacataaagattgggtataatgctcacgacactatcctgatc
tcctactcgaccaatgcagaggctctagccgcctaccgctgcagtgatccggtcttcaac
aacaggttcattaaactcttctggcacaaaccagaaaaggagcagggacaaaatcagcca
gactcgtcagaaaattctggtaacaaggctgctggctccggtgattttaggaatgtccag
catgcctctgctaagtcgagactcggagccgtcatccctccagccagtaaactctcactc
aataacctcaagaagccacctactacccaggcagtggtagctactgatggtgaagccagt
ttatctacagatacccgggactttaacaaggaaaagacgcttgtgtacacatcctcagta
ggtaacattacaaagactgtgtacaaccctgaagctatcaaagctaagacggtccttact
agtcccaccgctgtacagacagccagctttgtcttcaagattgaggcgattaaacgacag
gaagctctgaagaaggaagcaatgaaaaagaaaatagaaattcaaaagcagaaacatgat
ctacttcagaaacagctagaacatcaaaaggtgctgatacaaaagctagagaaaaccaaa
aacatgagtgccgaggacaaggaaaccgtaatgaagactttgaagatccttgaatgcagt
attgtaaagctgaaagtagaacttgttccaaaaaaacctgtggtggatccggcaatgctc
aaatctccagaactggccaggaaagaaatccttgacactgaattggagttgtttaccaaa
cagagcactggggaggatacatcaaatttaaaacagaaactcaacgaactcactaaacag
gcatcagcgatgggtcttcttggcagagggcgtggtcggggtgtcccccgtggacgggga
tctaccacctgggtagccagtggtctgaggggtcggggacgtgctcagagaggaagaggg
aggggatcgggcttccctcctggtggaaacagaaccttggacaaaagaccaaagatggtg
gaggtgtctggattcgacctggaggaaaaagacggaatccattctcacttttcacaattt
ggtacagttgaaaaggtggaatttgatgaggagtctcaatcagcaatcatctcctttcaa
acaagaatggatgcagaaatggcggtgttacgtggttccaagttcaacaacactgtgctt
gcgatgaagtggtacattgagccaaaggtggtactgaacctcaacatcagcagtgatgac
agcttcgttggagaggaccctgctgaggaggtatctttagttgacgatgaaatagatgag
gatgctttacttgctggagatgatgacgaagaagaagatgaggaaagtcgttcatggagg
cgataa
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