Mizuhopecten yessoensis (Yesso scallop): 110458873
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Entry
110458873 CDS
T05079
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110458873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110458873
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110458873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
110458873
NCBI-ProteinID:
XP_021366504
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MQSSTVETSEEFLPGIKDVTEFTQKTLRAVLQATKASNDMPAAGDDFDYYSSFQGFRDIL
DIEGKRILHIVQNVMQHQNVRGRLSHGSSDILDLEDKFDVLTDANDQILERVGSWLDEAS
GIKKKDNTLVLATATPKQQASSSWNKKKSTSATKSAASYHLLSAKNILRPQLRFKDKVDN
RNQPFVPRIKEKPNAMKSLEESLRLPEDVTIEMTESPSFLYPHPYQYELDHLKQEPAMLS
KVEPIEPRPLDDTPLSMVTKVSELVALCDKLKTCKTVAVDLEHHSYRTFQGITCLMQIST
RDQDFIIDTLELRSDLHILNSVFTDPSIVKVFHGADSDVDWLQRDFGLYVVNMFDTGQAA
RVLNLARFSLAHILKAYCGVEADKQYQLADWRIRPLPKELVAYAREDTHHLLYIYDRLKN
DLIERGNEQNNLLMSVLHRSKEVCSKVYRKNIFSEDDYLDLYHKSKKVFNSQQLDALKKI
FMWRDRTGRQEDESLGYVLPNHMLLQIVEILPRERQGVLACCNPIPPLVRQYLPEVHGII
SEAREKPLVKVTKRKVNRPSHQQHPKYDGESLLLCPHDLSHQLSQKPGEKSVLLPDPMDL
ADSSPLPPSYDLHYSIKLKTNPDLRALDSNNYLPVTKESPVKTPAKLNSDSSREIHLIDM
NWKLVKNTIKRKLPEGTAASSPAPGPPTKRQKKDESGEKKEQEAEQESTPRKTLSQILKA
KYSKLQKVDKIGVTKDLTEADEKKKKKKTNSMVDLEDSFQPYDYSKTDSSMFQGGAANKS
DVYNPNRYYGAKGKGNKAPKPKYSTSKSNKSYSYKDKQRNKN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcatccacggttgaaacatcagaggagtttttacctggaattaaagatgttaca
gaatttacacagaaaaccttgcgtgctgtactacaagctaccaaagcttccaatgacatg
ccagctgctggggatgactttgattactactccagtttccaaggtttcagagacatactt
gacatagaaggaaaaagaatcctgcacattgtacagaatgtgatgcagcatcagaatgtc
agaggaaggctgtcccacggtagttcagatatccttgacctggaggacaaatttgatgtg
ttgaccgacgcaaatgaccagatacttgagagagtgggaagctggttggatgaagcttca
ggtatcaagaagaaagataacactcttgtgctagcgacggcaacaccaaaacagcaggcc
tcgtccagctggaacaaaaagaaaagtacatctgctaccaaaagtgccgccagctaccat
ctcctgtcagccaaaaacatcttacgtccacaattacgtttcaaggacaaagtggacaac
agaaaccaaccttttgtcccgaggattaaggagaaaccaaatgctatgaagtcattagaa
gaaagtttacgtttacctgaggatgttacaattgagatgacagaaagtccttcattttta
tacccacacccataccagtatgaacttgaccacttgaaacaggagccagcgatgctgtct
aaggtggaaccaatagaaccacgtccattggatgacacccctctctccatggtaactaag
gtgtcagagttagtggcactgtgtgacaaacttaagacgtgtaagaccgtggcagtggac
ctggagcaccactcataccggacgttccaggggatcacatgtctcatgcagatatcaaca
cgcgaccaggacttcattatagacacattggaacttcgtagtgaccttcacatactcaac
agtgtgttcacagaccccagcatagtcaaggtattccatggtgcagactcggatgtggat
tggcttcagagggatttcggtctgtatgttgtgaacatgtttgatacagggcaggctgcc
agggtgctcaacttggcacggttttccctggcccacattctcaaagcgtactgtggggtg
gaagcagataaacagtaccagttagcagactggaggattcgacctctgccaaaggagctg
gtagcatatgcccgtgaggacacccatcacttactgtacatctacgataggttgaaaaat
gatcttattgagcggggaaatgagcaaaataacctgctcatgtctgtcctgcacaggagc
aaggaagtgtgttcaaaggtatacaggaagaatattttcagtgaggatgactatctagat
ctgtaccataaaagtaaaaaggtgttcaactcacagcagttggatgcactcaagaagata
ttcatgtggcgggaccgaactggaagacaggaggacgaaagtctggggtatgtgttgcca
aaccacatgctgctccagatcgtggagatcctccctcgagagagacagggagtactggcc
tgttgtaacccaatcccaccactggtgaggcagtacctcccagaggtccatggcattatc
tcagaggcaagggagaaacctctcgtgaaggtgacaaagagaaaagtgaaccgaccgtct
catcagcagcacccaaagtacgatggtgaaagtctgctgttgtgtcctcatgatctatct
catcagttgtcacagaaaccgggggaaaagtctgtgctgttaccagatccgatggacctg
gcggacagctcccccttgccaccttcgtatgacctccactatagtatcaaactgaagacc
aacccagatctcagggccttggactctaataattatttgcctgttacaaaggaatctcca
gtgaagacaccagcaaaactgaattcagactcatctagagaaatacatttgattgatatg
aactggaaactagtcaagaacacaatcaaacgaaaactacccgagggaacagctgcatca
tctcctgctccaggtcctcccaccaaacgacagaaaaaggatgaaagtggggaaaagaaa
gaacaggaggcagagcaagaatcgacaccccgcaaaactctctctcagatattgaaagcc
aagtacagcaagttgcaaaaggtggataaaataggcgtaacaaaagatttgacagaggca
gacgagaaaaaaaagaaaaagaagaccaacagcatggtagatctggaggatagtttccaa
ccttatgactacagcaagacagacagcagcatgtttcagggtggtgctgccaataaatca
gatgtatataaccccaacagatactatggggcaaagggcaagggtaacaaggcacctaaa
cccaaatattcaacatccaaatccaataaaagttacagctacaaggacaagcaacggaac
aagaattga
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