Mizuhopecten yessoensis (Yesso scallop): 110458885
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Entry
110458885 CDS
T05079
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110458885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110458885
03012 Translation factors [BR:
myi03012
]
110458885
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110458885
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110458885
Translation factors [BR:
myi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110458885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_19
AAA_22
AAA_16
Myosin_head
NACHT
ATPase
Motif
Other DBs
NCBI-GeneID:
110458885
NCBI-ProteinID:
XP_021366517
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MLHVCLRFLNRRHSLLTLQVTAMSYRGEGQQQSWKRGGRGWDRGRRYGNRSREDQDGDGK
ERGGGGWRGGRRRGGRWNGEHEGGGGRGRQRGGRWDGEHEGGGGGGNRGRERPPPGLSGR
EIGMWYAGRQKTKTARRENEMTPVVNLQGNMERKIRNLLDDIQTGDNVQPQPSRSGASLD
QDVGESDGRPSTSYAGGRNQQNFARPSTASGERGQGSQGYSGFKIKSERDGSRKVSSYDA
WNDTDADKMETDAMGIGFSGEVTGEEEQLFEPDEGDYNECDVLPMDEEAMQYTADEIGHI
FDDEMNDEAVEDIGMGRDPELDRLLMDQAEDRKTNTQFMKMLDFRKKLPSYNKRQEIMEA
LESHQCLVISGETGCGKTTQVPQFILDDYISRGKGSQCKVICTQPRRISAITVSMRYEGR
ISAITVAERVADERGQSVGKEGDIGYSIRLERHLPRKKGSVLYCTTGILLKYLELDPSLR
RASHIIVDEIHERDVLSDFLLIILKDLLPKRPDLKVILMSATLNAEQFSNYFNGSPMLHI
PGFTYPVKEYWLEDAIQMTGYQPSQQKKPAFNPRKQKQKCQLEIEETKTWLKTLDPAKYS
QSTRRAIENMDMDEVDIELIHRVIHHICFKMDGDGAILVFVPGMAEIKNVNKSLVETPVF
NSSNFRIIPLHSMMPTVNQKEVFDRPPPGVRKIIIATNIAETSITIDDVVYVVDCGKIKV
KDFEPEINLATLTSQPVSKANARQRRGRAGRVQEGVCFHLYTSHQQESLQDYLLPEILRT
PLEELCLQIKLLKLGKIEPFISKAMQQPSPEALHIALVTLRDLKALDENENLLPLGHHLA
RMPVDPKSGKMILFGAMFGCLDPICTIAASLSFKSAFVTPLGKESEADRAKVKLSDGSQS
DHIMLVNAFKGWEKAKRQGTGSQYCWENFLSPSILKQLDGMKGQFGEFLHARRFINTRNP
SDRSVNMNSDNENLVKAVICAGLYPNVAKLFKKNIQKYRQVPFLLNGERNKVYLHPASVN
NSNRNFNSSWFIYHKKMKTAQVYLYDTSMVSPYPLLFFGGEIGTHRESMDGDMRTKITID
NWISFWANQSTSQMVKDLRQQLDRILEEKIKRPGVTDWSKKSREGAVMCAILELLTTEEV
VKYEDHRDQHQGQRSDQCNDHRDQHQGQRGDQYQRHKRFDDR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgctacatgtatgtcttcggtttctgaacagacgacacagtctactgacattacaagtg
actgcaatgagttacagaggtgagggccaacaacaatcctggaaaagaggtggtcgtggc
tgggatcgtggtcgcagatacggcaatagaagtagggaagatcaggatggtgatggtaaa
gaaaggggtggaggtggatggagaggagggagacggagaggaggaagatggaatggagag
catgaaggaggagggggaagagggagacagagaggagggagatgggatggagagcatgaa
ggagggggaggaggaggaaacagaggcagagagcgaccaccgccagggttgtctggcaga
gaaattggcatgtggtatgcaggcagacagaaaaccaaaactgcaaggagggaaaatgaa
atgacccctgtggtgaacttacaaggtaatatggaacgaaagattcgtaacctcctggac
gatatccagacaggggacaacgtccagccacaaccatcacgatctggagcctctttggac
caggacgtgggtgaatcagatgggcggccatcaacatcttatgctggcggtcgcaatcaa
cagaattttgcaagaccaagcactgcatcaggtgaaagaggtcaaggttcacaaggatat
tcaggattcaaaatcaaatcggagagagatgggagcagaaaagtttcttcctatgatgca
tggaatgacaccgatgctgacaaaatggagactgatgccatgggaattggcttctcaggg
gaggtaactggtgaagaggaacagttatttgaaccagatgagggggattataatgaatgt
gatgtgttaccaatggatgaggaggccatgcagtacactgctgatgagattggacacatc
tttgatgatgaaatgaatgatgaagcagtggaggatatagggatgggcagggacccagaa
ttagacaggctactgatggaccaggcagaggacagaaagactaacacacaatttatgaag
atgctggacttcagaaaaaaactgccttcttataacaagagacaggaaattatggaagca
ttggaatcacaccagtgcctggtgatcagtggggagactgggtgtggaaagactacacag
gtgccccaatttatattggatgactacatatcccgcgggaagggatcacagtgtaaggtc
atatgtactcaacccaggaggatcagcgctataactgtaagtatgaggtatgaggggagg
atcagtgctataactgtcgctgaacgagtggctgatgagcgcggacagtcggttggaaaa
gagggtgacattggatactccataaggctggagagacatttaccaaggaagaagggatca
gttttatactgtaccacaggtattttgttgaaatacttggaacttgatccgtccctgagg
cgagcgagccacatcattgtagatgagatacatgagagagacgtattgtccgacttcctt
ctcatcatcctgaaggacctcctccccaaacgtcctgacctcaaggtcattctaatgagt
gctacattgaatgccgaacaattctcaaattacttcaatggcagccccatgctacatatc
ccaggattcacgtatcctgtgaaggagtactggctagaagacgccatacaaatgacaggt
tatcagcccagccaacagaagaagccggcatttaaccccagaaaacagaaacaaaagtgt
cagcttgaaatagaagaaacaaagacatggttaaaaacacttgacccagcaaagtactcg
cagtcaacacggagggcaatagaaaacatggatatggacgaggtggacatcgaactcata
cacagagtcatccatcacatctgcttcaaaatggatggagatggtgctattttggtgttt
gtacctggtatggcagaaataaaaaatgtgaataaaagtttagttgagacaccagttttc
aacagcagtaattttcggattattcctcttcattcgatgatgcctacggtgaaccagaaa
gaggtttttgatagacctcccccgggggtcaggaagatcatcattgcaaccaacatcgcc
gagaccagtataaccattgatgatgtcgtgtatgtggtggattgtgggaagataaaagta
aaggattttgagccggagatcaatctggccacgttgacgagccagccggtgtccaaagcc
aatgctagacagaggcggggtcgagctgggcgtgtacaggagggggtgtgtttccaccta
tacacaagtcaccagcaggaatcactgcaggactaccttctgccggagattcttcgcacc
cctctagaggagctgtgtctgcagataaagctgttaaaactgggcaagattgagccattc
atcagcaaggccatgcagcagccatcccccgaggccctgcacatcgccctggtaacgctt
cgtgatctgaaagctctggatgaaaatgagaacctgctgccccttggtcatcacttggca
cggatgcctgttgacccaaagtccggcaagatgatcctgtttggtgccatgttcggctgt
ctagaccctatatgcaccattgccgctagtctgagcttcaagagtgcctttgttactcct
ctggggaaagagagtgaagctgacagggccaaggttaagttgtctgatgggagccaaagt
gaccacatcatgctggtcaatgctttcaagggctgggaaaaagccaagcgacaaggaaca
ggctcacagtactgctgggaaaatttcttgtcccccagtattctcaagcaactggatgga
atgaagggacagtttggggaatttctacatgctcgcagatttatcaacactcggaatcct
tctgaccgatcagtaaacatgaattctgataatgagaatttggtgaaggcggttatatgt
gccggattgtacccgaatgtggcaaagctattcaagaaaaacattcagaagtatagacaa
gtgccgttcctcctcaatggtgaaaggaataaagtttacctgcacccggcatctgttaac
aacagtaacagaaattttaactcctcttggttcatctatcacaagaagatgaaaactgct
caagtgtacctgtatgacaccagtatggtctctccctacccgctcctgtttttcgggggt
gaaattggaacacacagagaaagcatggatggtgacatgaggacaaagatcaccattgac
aactggatatcgttctgggccaatcagtcaacatctcagatggttaaggaccttcgacaa
caactagacagaatattggaggaaaagatcaagcggccaggtgtgacagactggtccaaa
aaaagcagagagggggctgtcatgtgtgccatattagagcttcttacaacagaagaggta
gtcaagtacgaggaccatagagaccaacaccagggtcagcgcagtgaccagtgcaatgac
catagagaccaacaccagggtcagcgtggtgaccagtaccagagacataaacgttttgat
gatagatga
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integrated database retrieval system
