Mizuhopecten yessoensis (Yesso scallop): 110458930
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Entry
110458930 CDS
T05079
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
myi04515
]
110458930
Cell adhesion molecules [BR:
myi04515
]
Cadherins
Cadherin related
110458930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Toxin_R_bind_N
Laminin_G_3
Cadherin_C_2
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
110458930
NCBI-ProteinID:
XP_021366586
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MAKIHFGLFLVFFIGHVYCMSEPNLYEPVIRSQRTNKKGVPVFKGTISEDQATVKLDSPL
RAFDNDSTGGAKFICGYDVISLKHEVPFVVNVKNRATGEAEINLIEGAHLNYEKRARYKF
SAIAYDCGTPRRESNRAIFFIRVKDVDEFPPKFIQDNYFVEMDEARFYDSLVRVRATDSD
RSPEYRGICGYEILTNNVPFAIDRRGNLRNTELIHYRQHHNFILELVAVDCGGKRSKKAV
INIKMREVCKSGWQDIPDHVNYDAGSGQVKMVPGATLKWCDNSCVPQKVKVKMHLATKHI
GKGCDRDTYSIVSQRKLCGANDNSVDLLPSPSLTTTYTSTLHVDDGHESDQIFYFDGQTN
AVEVPASHFNHSLHEHFTISTWMKHEFEDWTVSPDGRPEKEHIVCMSDGDGMNRHHYAWF
VHGEKLVFLLRREAGDEEDMKVFKPAEWRWSIPQINDGEWHYYAISVDYPHVRMYIDGKL
LIPDQANMEVVDDWPLRNTIKVHSTKLVVGACWQGGKEKFEHYLQGFLAGLSILKGQTES
DRVIHCLNSCKENLDFKGTKALLTGSAVSYNSEMTEFTIEGKNVTKVQNLVRDIVYLNAR
QFPTPGRRNIDIATNVHCNGKEVILPVAETYVMVNPAPIPSISLSGPHIVQSSASQLLSG
QKIFTGLHISVDFLLHNGLSPQEDEDEDEDEEEEDGTMPSKIQKLQDKLSRTRNQQETVD
KDIPQQNILLDSCTIRADPPLDFRVEHLSLPESTISRFNMHLEGSETNSGLDITNADSVE
NYERVMQELYFFHNKGNSLNSRKFILSCSSQSRRFISNQLEVKIVAVHSEPRKIVHAHAQ
ENRIQQFKLENNIGGSVPVGVAAHASPNVGMVAIIVVCVGFLLFMIILGVIRIRAAHRRT
VVQVEDKMMEMEWDNSALNITVNPMEQKEVREKVFEYEDVPMKLRDDSDSDDDIDSYHDD
CDSSDEEEEEVVVKKVKDLEWDDSTLSF
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatacatttcgggttattcctcgtgtttttcattggacatgtgtattgtatg
tcagagcccaacctctatgaacctgtgatacgttcccagaggactaacaagaaaggagtg
cctgtgtttaaagggactatcagtgaggaccaagcaactgtcaaacttgattccccactc
cgggccttcgacaacgattccacaggcggagcgaaattcatctgcggctacgatgtgatc
tcattgaaacatgaagtgccgtttgtggtgaacgtcaagaacagggcaaccggcgaggca
gagattaatcttatcgagggagctcacctaaactacgaaaaacgggctcgctacaagttt
agcgccatcgcctatgactgtggaacaccaaggagagaatcaaatagggctattttcttc
atccgcgtgaaggatgtggacgaattcccaccgaagttcatccaggacaactactttgtg
gagatggatgaggctcgcttctacgactcgttggtgcgtgtcagagccacggatagtgac
cgctcacctgagtaccgcggcatctgtggttacgagatcctcaccaacaatgtccccttt
gccattgatcggcgaggtaacttgagaaacactgaactgatacactatagacagcaccac
aacttcatcctggaactagtagctgtcgactgtggaggcaagcgctccaagaaagctgtc
attaacatcaagatgagggaggtgtgcaaaagtggatggcaagatattcctgaccacgtc
aactatgatgctggcagtggacaggtcaagatggttcccggggcaaccctcaaatggtgt
gacaactcctgtgtaccacagaaggtcaaggtcaaaatgcacctagcaaccaaacatatc
ggcaagggatgtgaccgtgacacctactccattgtctcccagaggaaactctgtggtgcc
aacgacaacagtgttgacctgttgccttctcccagtctgacgaccacctacaccagcacg
ctccacgtcgacgacggccacgagagcgaccagatcttctacttcgacgggcagacaaat
gcggtggaggtgcccgcctctcacttcaaccactccctgcacgaacacttcaccatttca
acatggatgaagcatgaattcgaggactggaccgtcagtcctgacggccgcccagagaag
gaacacatcgtgtgcatgtctgatggcgatggtatgaaccgtcaccactatgcgtggttc
gtccatggcgagaagctcgtgtttctactgcgacgtgaggctggggatgaggaggatatg
aaggtgtttaagcctgcagagtggcgctggagcatccctcagatcaatgacggggagtgg
cattactatgccatcagtgttgactacccacacgtgcggatgtatattgacggcaaatta
ctgatccctgaccaggccaacatggaggtagtggatgactggcctctccgcaacaccatc
aaagtccattccaccaagcttgtcgttggtgcctgctggcagggtggtaaagaaaagttt
gagcattatctgcagggattcctggcaggtctgtccatattgaagggtcagacagaaagt
gaccgtgtcattcactgcctaaacagctgtaaggaaaaccttgacttcaagggaacaaaa
gctctgctcactggttccgcggtgagctacaacagcgaaatgacagagttcaccattgag
ggtaaaaatgtgaccaaagtgcagaatctggttcgagatattgtctacctcaacgctcgg
cagttcccaaccccagggcgccgaaacattgacattgcaaccaatgtccactgtaacggt
aaagaagtgatcctaccggtggccgagacctatgttatggtcaaccctgctccaatccct
tcaatctccctctctggaccccacatcgtccagtcaagcgcttcccaacttctctccggc
cagaaaatcttcactggccttcacatcagtgtcgacttcctgctccacaacggactttct
ccacaggaggatgaagatgaagatgaagatgaagaagaagaagatggaacaatgccatca
aaaatacagaaacttcaagacaagttatctcgtaccaggaaccaacaggaaacagtggac
aaggacatcccacaacagaacatcctgctagactcttgtaccattcgggctgacccccct
ctggacttccgtgtagagcacctcagtctcccagagagcaccatctcacgattcaacatg
cacctggagggaagcgagaccaacagtggccttgacattacaaatgctgattctgtggaa
aactacgagcgagtgatgcaggaactctactttttccacaacaagggaaactctctcaat
agccgaaaatttatcctcagctgctcctctcagagtcgtcgctttatcagcaaccagcta
gaggtcaagattgtggctgttcacagcgagccgaggaaaattgttcatgcccatgcccag
gagaaccgcatccagcagtttaagctggaaaacaacattggcggtagtgttccagtcgga
gtggcagcccacgcctcacctaatgttggaatggtagcaatcattgtggtgtgtgtgggc
ttcctgctgttcatgatcatcctgggtgtgatccgtatccgggcggcacacaggcgtacc
gtagtacaggtggaggacaagatgatggagatggagtgggacaactcggccctcaacatc
actgtcaacccgatggaacagaaggaggtaagagaaaaggtgtttgaatatgaagatgtt
cctatgaaattgcgagatgattctgatagtgatgatgatattgacagttaccatgacgat
tgtgatagttcagatgaagaagaagaggaagttgtggtgaagaaagtgaaagatctcgag
tgggatgattccacattatctttctga
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