KEGG   Mizuhopecten yessoensis (Yesso scallop): 110459628
Entry
110459628         CDS       T05079                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110459628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myi03019]
    110459628
Messenger RNA biogenesis [BR:myi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     110459628
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_Vps41 eIF2A Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SPT8 NBCH_WD40 PROPPIN Beta-prop_EIPR1 Cytochrom_D1 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD40_like WD_LRWD1 WDR54 Beta-prop_LRRK2 VPS8_N Beta-prop_RIG_1st CFAP43_N PHTB1_N Chorion_S16
Other DBs
NCBI-GeneID: 110459628
NCBI-ProteinID: XP_021367649
LinkDB
Position
Unknown
AA seq 310 aa
MAASQLYSIIFKQEQAHEDSIWSCAWRQNERDRSENIVTGGIDDMVKIWRWSDDKLDLRH
ELEGHQLGVVSVDLNQAGTLAASSSLDSHVRVWDVETGKCIKSMDAGPVDAWTLAFSPNS
QFLASGSHSGKINMFGVDTGRKEQSLDTRGKFTLSLAFSPDGRHIACGAIDGIINVFDIE
SGKLIHTLEGHAMPIRSLCFSPDSQLLVTGSDDNQIKIYDVQHANLAGTLSGHGSWVLSV
DFCPDNTHFVSSSSDKTVKIWNAGSRQCVHTFYDHTDQVWGARYNHDGSKIVSVSDDKAI
HVYDSPLMSG
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcggcttcccagttgtactcgatcattttcaaacaagagcaagcccatgaagacagc
atatggagttgcgcatggcgacagaatgagagagacagatcagaaaatattgtcactgga
ggaattgatgacatggtcaagatatggagatggtcggacgataaactggatctgagacat
gagttagaaggtcaccagcttggagttgtctccgtagatttgaatcaggctgggactttg
gctgcgtccagcagtcttgacagccatgtccgagtctgggatgtggagacgggcaagtgt
atcaagagtatggatgctgggccagttgatgcgtggacgctggctttctcccccaactcc
cagttcctagcatcaggcagtcacagcgggaaaattaacatgtttggtgtggacaccggg
aggaaggaacagtcgctggacacgagggggaagttcactcttagtctcgcatttagtcct
gatggccgacacattgcatgtggagctatagacgggattataaacgtgtttgacatcgag
tcaggcaaactcatacacacactcgaaggtcacgctatgccaatcagatcgctgtgtttc
tcccccgactcgcaactcctggtgacgggatctgacgacaaccagatcaaaatatatgat
gtccagcatgcaaacttagcaggaacactctcaggccatggatcctgggtgttgagtgtt
gacttctgtccagacaacacccactttgtctcaagttcatcagataagacggtaaagatc
tggaacgctggatcccggcagtgcgtacacacattctacgaccatacagaccaggtgtgg
ggagccaggtacaaccacgacggatcaaagatcgtgtcggtgtctgatgacaaggcaata
catgtgtatgactctcctctaatgtcaggctga

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