Mizuhopecten yessoensis (Yesso scallop): 110459983
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Entry
110459983 CDS
T05079
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
myi03009
]
110459983
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110459983
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110459983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
110459983
NCBI-ProteinID:
XP_021368326
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MEPTWEDLPVTLCNTTLISLDQLNFSKATPVQAACIPLFIGNKDVAAEAVTGSGKTLAFL
IPILEKLDKHMQETGKLKKQEIFSIILTPTRELAFQIKEVLDHFLELHDGVVSILFIGGE
NPHNDINKFKTNGGHIVVATPGRFESLLEKKWDECNLAASVKSLEILVLDEADRLLEMGF
EASINTILSFLPKQRRTGLFSATQTDEVEKLIRAGMRNPVRINVKEKRDNSDLSAARRTP
ASLENQYMVLDSDEKFNQLIHFLHINKKLKILVFFSTCASVDYFSKSIQHILKQHQVLSI
HGKMKKKRNKIFSRFRTLESGVLLCTDVMARGVDIPEMDWVVQYDPPSSANSFIHRCGRT
ARIGNKGTALIFLLPTEDAYVKFIEINQKAPLQMIEKADDVQNHLPKLQKMSIKDRSMMD
KAARAYVSFVQYYVKHECSMIFRVKDLDFGRLATGFGLVRVPKMPELKGKVLTNFVAPDI
DWATIPYKDKAKEKARQEQLNSGESVKKGKQKKHLETKSWSQHKDRKDKKKKRKEKTNKR
KLEISEEDMDDIDKDLKLMKKLKKGKISKEDFDKEFADDSGSEES
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacgtgggaagatttgcctgttacactttgtaatactacccttatatcattg
gatcaactcaatttttccaaagctacacccgttcaggcggcatgtataccattattcata
ggtaacaaggacgtggcagctgaggcagtgactggaagtggcaaaactttagcattcctt
attcctattcttgagaagcttgacaaacacatgcaagaaacgggaaaattgaagaagcag
gagatattttctattattctaacacctacaagagaactagctttccaaatcaaggaggtc
cttgatcattttcttgaacttcatgatggtgtcgtttctattttgtttattggaggcgaa
aatccacataatgatatcaataaattcaaaacaaatggaggtcacatagtagttgccact
cctgggcgatttgagtcattgttagagaaaaaatgggacgaatgcaatcttgcggcaagt
gtcaaatctctagaaattcttgtgttggacgaagcagatcgcctgttagaaatgggtttt
gaagctagtatcaacacaattctaagttttctaccgaaacaacgtcgtacagggttgttt
tctgccacccagacagatgaggttgaaaaactcatacgtgctggcatgaggaatcctgtt
cggattaacgtgaaggagaagagagacaattctgacctcagtgccgcaaggagaacgccc
gcctctctagaaaaccagtacatggtattggacagtgatgagaagtttaaccaactcatc
catttcttacacattaacaaaaagctcaaaatattggtgtttttcagcacatgtgcaagt
gttgactatttttcgaaaagcatacagcatatcctgaaacagcatcaggtcctttctata
catggcaaaatgaagaaaaagaggaacaagatattctcaagattccggaccctggaaagt
ggtgtgttattgtgtacagatgtaatggcaagaggagtggacattccagagatggactgg
gttgtccagtacgatccgcccagctctgctaactcctttatccacaggtgtggacgtaca
gcaaggatcggcaacaaggggacggctcttatcttcttgttaccaacggaagatgcctat
gtcaaattcattgaaatcaatcagaaagcacctctacagatgatagaaaaagcagacgat
gttcagaatcaccttccaaagcttcagaaaatgtctatcaaagaccggtccatgatggac
aaggcagccagggcatatgtgtcatttgtgcagtattatgtcaaacatgaatgcagcatg
atcttccgagtgaaggacctagacttcggtagactagcgacagggtttggactggtacgt
gtccctaaaatgccagagttgaaaggaaaggtgctaacaaactttgttgccccggacatt
gactgggccaccataccttacaaagataaagcaaaagagaaagcgagacaggagcagctg
aatagtggagaaagtgtgaaaaaaggaaaacagaagaagcatttggagaccaagtcctgg
tctcaacacaaagatcgcaaagacaagaaaaagaaacgcaaggaaaaaacaaacaaacgc
aagctggagatatcagaggaagacatggacgatattgacaaggacttgaagttgatgaaa
aaactaaaaaagggaaagatatcaaaggaggattttgacaaagagtttgcagatgacagt
ggctcggaagagagttga
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