Mizuhopecten yessoensis (Yesso scallop): 110460311
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Entry
110460311 CDS
T05079
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110460311
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myi04147
]
110460311
Membrane trafficking [BR:
myi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110460311
Exosome [BR:
myi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110460311
Exosomal proteins of bladder cancer cells
110460311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
110460311
NCBI-ProteinID:
XP_021368819
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLFNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
QQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHQDYIRTTYFHHEYPWILSSSDDQTIRIW
NWQSRSCVCILAGHSHFVMCAMFHVSEDLIVSASLDQTVRVWDISGLRKKNVAPGPGGIH
ERSRSPGQTDLFGVSDAVVKHVLEGHDRGVNWAAFHSTLPLIVSAADDRQVKLWRMNESK
AWEVDTCRGHYNNVSSCLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRREHDRFWIMA
AHPNLNIFAAGHDSGMLIFKLERERPAYAVHNNILYYVKERYLRRLDFTTNKDNPVMQLR
GAGRGTNGTRCPVYSMSYNPAENSVLLCTRTSNLDNSTYDLYGIPKDSDSSSPDAPEGKR
SSGLTAVWVARNRFAVLDRTHNIVIKNLKNEITKKLQAPNCDDIFYAGTGCLLLKDSDGV
TLFDVQQKRALATVKISKVKYVVWSADMSHVALLSKHIISICNRKLENLCTIHENIRVKS
GAWDESGVFVYTTSNHIKYALTNGDHGIIRTLDLPIYITRVKGNSVYCLNRECVPGRLVI
DPTEFKFKLALINRKYEEVLHMVRNAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFGLA
LECGNIEIALEAARSLDDQACWERLGEAALLQGNHQVVEMAYQRTKNFDKLSFLYLITGN
LEKLRKMMKIAEIRKDTSGHFQNALFLGDVSERVRILKNCGQKSLAYLTAATHGIEDEAE
QLQASFGEKDRTPDLYPTAKLLHPPVPIMQQESNWPLLTVTKGFFEGAMAAGSGKAKGLA
KAAVDIEDGVEDGWGADVDNIDLGDDGFGGEGIDEEDMEAGEEGGGWDVDDVDLPTDLDI
GSIPSAGEDGYFVPPTKGQSQSQVWCNNSQLPVDHVLAGSFETAMRLLHDQIGVVSFEDY
KQLFLHTYSRARTCFQGVPSLPPMFGYPHRNWKESGARNGMPAVGQKLNTLVQQLQVAYQ
LTTSGKFPEAIIKFRSILLSVPLLVVDNKQEIAEAQQLIEICREYIVGLAMEQRRKELPK
ATLDDQKRLCEMAAYFTHCNLQPVHMILTLRTAQNLFFKLKNFKTAASFARRLLECGPKP
EIATQTRKMLAACEKTPTDTHELKYDQHNPFDICSATFTPIYRGKPVVKCPLSGACYHPD
HKGEVCRVTKVTEIGKDCIGLRISPIQFR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaagtttgaaacgaagtctgcaagggtgaaaggtttatcctttcaccctaaa
cggccctgggtactggctagcttgttcaatggagtcatccagttgtgggattatcgaatg
tgtacactcatagacaagtttgatgaacatgatggacctgtgagagggatatgcttccac
cagcagcagcccctgtttgtgtccggtggtgatgactataagattaaggtgtggaactat
aaacagaggagatgtctgtttacactgctcggccaccaggactatatccggaccacatac
ttccatcacgaatacccttggattctgagttcgtctgacgaccagaccatcaggatatgg
aactggcagtctcgcagctgtgtctgcatacttgcaggtcacagtcactttgtgatgtgt
gcaatgtttcatgtgtcagaagacctgattgtgtccgcatccctcgaccagactgtccgt
gtgtgggacatctccggactgaggaaaaagaatgtggccccaggtcctggcggtatacat
gagcgttctagaagtccaggacagaccgacctgtttggtgtgtctgatgcagttgtcaaa
cacgtgctggaaggacatgaccgtggtgttaactgggcagccttccactccacactgccc
ctcattgtgtccgcagctgatgaccgacaggtcaaactctggaggatgaatgagtccaaa
gcttgggaagtagacacatgtcgtggccattacaacaatgtatcgagctgtctgtttcat
ccccgccaggaacttatcctgagtaactctgaggataagagtatccgtgtctgggacatg
agtaagaggactggggtacagacattccgacgggaacacgaccgtttctggattatggct
gcccatccaaacctcaacatcttcgctgctggccatgacagtggcatgcttatcttcaaa
ctagaacgtgaacgtccagcatatgctgttcacaacaacatcctgtactacgtcaaggag
cggtatctgcgacgcctagacttcaccaccaacaaggacaacccagtaatgcagctccgt
ggtgctggcaggggtaccaatggtaccaggtgtcctgtgtacagtatgtcgtataaccca
gccgagaacagcgtcctcctctgtacgaggaccagtaaccttgacaactcgacctatgac
ctctatggtatccccaaggacagtgactcctccagtccagatgccccagaaggaaaacgg
tcttctggtctgaccgctgtatgggtggcaagaaacagattcgctgtgttggacaggaca
cacaatattgtaattaaaaatctgaagaatgaaatcaccaaaaagctacaggcccccaac
tgtgacgacatcttctacgctgggacagggtgtctccttttgaaggactctgatggtgtc
acactttttgatgtacaacaaaaaagagcacttgccaccgtgaagatttccaaagtaaag
tatgtggtttggtccgccgacatgtcacatgtggccctcctcagcaaacacataatctcc
atctgtaacaggaagctggaaaacctgtgtaccatccacgagaacatccgtgtgaagagt
ggagcgtgggacgagagtggtgtgtttgtgtacaccaccagtaaccacatcaaatacgca
ctcactaacggtgaccatggtattatccgtacccttgacctgccaatctacataacacgt
gtcaagggcaacagtgtgtactgtctaaacagagagtgtgtccccggacgccttgtcatc
gaccccacagaattcaagttcaaactcgccctcatcaatcgaaaatacgaagaggtatta
cacatggtgaggaatgctaaactggttggccagtcaatcatctcctacctacagaagaaa
ggctacccagaagtagccctccactttgtcaaggatgagaagacacgcttcggtctggca
ttggagtgtggtaatatcgaaattgcattggaggcagcacgctccctggacgaccaggca
tgctgggagagacttggtgaggcggccctactccagggaaaccatcaggtagtggagatg
gcctaccagaggacaaagaactttgacaaactctccttcctttatctcatcacagggaac
ctggagaaactcaggaaaatgatgaaaattgccgagatcaggaaggacacaagtggacat
ttccagaatgcactattccttggggatgtctctgagcgagttaggattctgaagaactgt
ggacagaaatcactggcctacctgactgctgcgactcatggtatagaggatgaggctgaa
cagttacaggctagctttggggagaaggatcgcactcctgacctgtatcctactgccaaa
cttcttcatcctcctgtacccatcatgcaacaggagagcaactggcccctcctcactgtt
accaagggcttctttgaaggagccatggctgctggcagtggaaaagccaagggtctggcc
aaggcagcagtagacatagaagatggtgttgaagatggctggggagcagacgtggacaac
attgaccttggggacgacgggtttggaggtgagggtattgatgaggaggacatggaggca
ggagaagagggtggtggctgggatgtggatgatgttgatctgcccactgacctcgacatt
ggttccatcccatcagctggagaggacggctactttgtaccacccaccaaaggacagagt
cagtcacaggtgtggtgtaataactcccaactacctgtggaccatgttctggctggatcc
ttcgagacagcaatgcggttgctccatgaccagataggggtggtgagttttgaagactat
aaacagctgtttctacacacctacagcagggcgaggacgtgtttccagggggtgccctca
ctccctccaatgtttggctacccacatcgtaactggaaggagtcgggtgcgaggaatggt
atgcctgccgttggacagaagctgaacacacttgtgcaacagttacaggtagcctaccaa
ctaactacatctggcaagttccccgaggccatcatcaagttcagaagcattctcctcagt
gttccactcctcgtggttgacaacaaacaggagatagcagaggctcaacagctgatagag
atatgtcgtgagtacatagtgggactggcaatggaacagaggcgcaaggagctccccaag
gccactttggacgaccagaaacgcttatgtgagatggcggcctacttcactcactgtaac
ctacagccagtccacatgatccttacactccgtacggcacaaaatctattcttcaaatta
aagaattttaaaacagctgcatcgtttgcaagacgactactggaatgtggtcctaaacca
gaaatagctacacagacaagaaagatgttggctgcatgtgaaaagactccaacagatacg
cacgagctgaagtatgatcaacacaatccgtttgatatttgttccgcaacattcacaccc
atatacagaggtaaacctgtggtgaagtgtcctcttagtggagcctgttatcacccagac
cacaagggcgaggtgtgtcgagtaacaaaggtgacagaaattggaaaggactgtatagga
ttaagaattagcccaattcagttccggtaa
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