Mizuhopecten yessoensis (Yesso scallop): 110460938
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Entry
110460938 CDS
T05079
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myi03021
]
110460938
03036 Chromosome and associated proteins [BR:
myi03036
]
110460938
Transcription machinery [BR:
myi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110460938
Chromosome and associated proteins [BR:
myi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110460938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
SH2
HHH_3
HHH_9
Spt6_S1
Tex_N
BaffR-Tall_bind
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
110460938
NCBI-ProteinID:
XP_021369842
LinkDB
All DBs
Position
Unknown
AA seq
2059 aa
AA seq
DB search
MSGFLDDEADVSDVSSEDGNASGSGGSVAGSVRARSRPKSGSRSRSGSRSGSGSRSGSGS
RSRSRSRSGSRSGSGSRSGSGSRSRSGSRSRSGSRSRSGSRSRSGSRSRSGSRSGSGSPA
RSGSGSPARSRSGSGSGSGSEIGQRKKKKKKKVKKLKKKKSKHIAIEDDDDDDEDEEEED
DEERIREEMKDLINDEIEEEDESGDESESGKRKHEDDSEIDDQLDDDDLDLIQENLGIRI
KKTKKLKRIRMMSDDEESDKEEEKDRNAIAEELFEHGEGEEGEEMEEASERPETTEYQDL
EESEDEDDMDNFIVNEDGEPVKKAKKKRHIIHTDAALQEAQDIFGVDFDFEEFDEYAEGE
EEEEEEFEEDEYMEEEGEDGVARPRTKKVGRKKGKKKGIFDVYEPTELERGFFTDKDQEI
RTKDMPERFQLRQIAVRPLEDGELEEEAEWIYKQAFTTPTMSQQNLLEQESHGNFGRRPP
SMVNKIREAINFMRDQHLEVPFIAFYRKEYVESDLNINDLWKIWQFDEKWTQLRTRKTNM
VRLFEKMQNYQFEENADPEKVLESNVRALTEEDIDRIKQVQTIEELRDVYQHFVLYYGPD
IPKMRNAEKTKARNEENSEHPENEDPPEQQEMIKQASRKSGYTICQQNKLDDIAQKFGLS
PEQFGENLRDNYQRHDVEQYPLEPLEVAKELVCSQFPTDEEVLLGARHMVAMQICHDPLV
RQCVRQTYFERAKINVVPSKKGIKEIDEAHPCYAMKYLKNKPVKDLKDEMFIKLSQGEED
GLLTITIFIDDMAEGSQTYFEEVRQLFYRDEFSHLVQQWNLQRSQALERALTKLLYPQME
KELRAKLIAEAKEGILKACCRKLYNWLKVAPYQADQQLEDDYDDDEKEVLRVLGLSFITA
RDTPGFGALIDGEGQVTDFIRMPYLTKRRNAWRQVDKDGKAQDLEKIKDFIATKKPHVVA
VSAESRKLDGLDVSTQGSDCGRKLDGLDVSTQGSDCGRKLDGLDVSTQGSDCGRKLDGLD
VSTQGSDCGRKLDGQDVSTQGSDCGRKLDGLDVSTQGSDCGRKLDGLDVSTQGSDCGRKL
DGLDVSTQGSDCGRKLDGQDVSTHGSDCGRKLDGQDVSTQGSECCRKLDGQDVRKQGLNV
IEFRDYPVVLRHAVSIARRLQDPLIEFAQLCNVDEDILCLKYHPMQDQIPKDDLLNALSL
EFVNRVNEVGVDINRAIANSHTAPLVQFVCGLGPRKASQLLKILKQANIRLENRTQLVEV
CHMGPNVFINCAGFIKIDTSSLGDSTDAYIEVLDGSRVHPENYEWARKMAVDALEYDDTA
EDANPAGALEEILESPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELNHRYKDLRTP
YRSPLNEERFNMITKETPETFYVGKLILTTVAGIAHRRPRGDQLDQANPVRDQETGLWKC
PFCNKDDFPELSEVWSHFDAGSCPGSAVGVRTRLDNGVTGFIHTKNISDKMVKNPEDRVK
VGMTIHSRITKIDIDRFQVDLTCKSSDLMDKDGNWKPPKDLYYDQDLEKESAEKEEEKRK
QQARQSRCLLSNKTKDRELTGVTEPPKDLYYDQDLEKESAEKEEEKRKQQARQSMCLLSN
KTKAGELTGSTEPPKDLYYDQDLEKESAEKEEEKRKQQARQTYTKRVIAHPSFHNIGYKE
CEKLLSDMDQGEAIIRPSSKGSDHLTVTWKVGEGAMQHIDVKERGKENAFSLGTTLVIGN
EEFEDLDEILARHIQPMAALARDIMNFKYHKEFESGKRETLDKILLEEKKKGPSRIPYYL
SLSKQYPGKYTISYMPRTKARHEFITLLPDGLRYRQQTFHSLNSLIRWFKEHFRDPIPGT
PASARTPMVSSNYATPSINLQGVDAATIQRAAAGLPSNIYNTLAQVAGAATPRIPRTTPG
ATPQFGSALHGAGFNIPLGTTPLMTPMMTPQHHITTPQVLNTPSYQPTPRAAVTPVWPGA
TPRATPRSMGTPSHPSQQSQRPAPSSTQEWAKPGTDWAKAAAMWAKGRQKPSTPRSGQSP
AVRASPMEQGDSTPLIDER
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtttttggatgatgaagcagatgtttcagatgttagttcagaagatggaaat
gcaagtggtagtggagggtcagtagctggatcagtgagagcaagatccaggccaaaatca
ggttcaaggtccaggtccggctccaggtctgggtcgggatcaagatcgggatcaggatca
agatccaggtcaagatctaggtctggctccaggtctgggtctggctccagatctgggtca
ggctcaaggtctagatcgggctccaggtcaagatcgggctcaaggtcaaggtctggctca
aggtcaaggtctggctcaaggtcaaggtctggctctaggtcaggatcagggtcaccagct
aggtcaggatcagggtcaccagctaggtcaagatcaggatctggttcaggttctggctca
gaaataggacagcgaaagaaaaagaagaaaaagaaagtaaagaaattgaaaaagaaaaag
agcaaacatattgcaattgaggatgatgacgatgatgacgaagatgaggaagaagaagat
gacgaggaaagaatacgagaggaaatgaaagatctgattaatgatgaaattgaagaagaa
gacgaaagtggcgatgaaagtgaaagtggaaagaggaaacatgaggacgactctgaaatt
gatgaccagctggacgatgatgatcttgacctcattcaagaaaacttgggaatccgtatt
aaaaagacgaaaaagctaaagcgtattcggatgatgtcagatgatgaggagagtgacaaa
gaagaagagaaagaccgtaatgctattgcagaggaactgttcgaacatggcgagggagaa
gaaggggaggaaatggaggaagcttctgagcgcccagaaaccacagagtaccaagactta
gaggaatctgaagatgaagatgacatggataatttcatcgtcaatgaggatggagaaccg
gttaaaaaggccaagaaaaagagacacatcatccatacagatgcagctctacaagaagca
caggatatttttggggtcgattttgattttgaggaattcgacgagtatgctgaaggagag
gaggaggaagaagaagagtttgaagaagatgagtacatggaagaggagggagaagatgga
gtcgctcgcccaaggacgaaaaaagttggacggaagaagggaaagaagaagggcattttt
gatgtgtatgagccaacagaattggagcgtggattcttcaccgacaaagatcaggaaata
cgaactaaggacatgccagaacgattccagttacgccagatcgctgtacgtcccctggag
gacggagaattagaggaggaagctgagtggatatataagcaggcctttaccacccccact
atgtctcaacagaatctattggaacaggaaagtcatggaaactttggccgacgcccaccc
agcatggtcaacaaaatcagggaagctatcaacttcatgagggaccagcacctcgaggtg
cccttcattgccttctatcgaaaagagtatgtagagtctgatctcaacatcaatgacttg
tggaaaatctggcagtttgatgaaaagtggacacaacttaggaccaggaagaccaacatg
gtccgtctatttgagaagatgcagaattaccagtttgaggagaacgctgacccagaaaag
gtcttggagtctaacgtgagagccctgacggaggaagatatagacaggatcaaacaagtt
caaaccattgaggagctgagggacgtctatcagcacttcgttttgtattacggacctgac
atcccgaagatgaggaacgcagagaaaacaaaagctcgtaatgaagagaacagtgaacac
cctgaaaatgaagatccccccgagcaacaggaaatgataaagcaggcctcgcgtaaaagt
ggctataccatctgccaacaaaacaaactagatgacattgcccagaaatttggtttgtct
cctgagcagtttggcgagaatcttcgtgacaactaccagcgtcatgatgtagaacagtac
ccgctggagcccctcgaggtcgccaaggagttggtttgcagtcagttcccaacagatgag
gaagtgttgcttggtgcacgccatatggtcgccatgcaaatttgccatgatccccttgtg
cgacagtgtgttcgacaaacatattttgaacgtgcaaaaatcaatgttgtcccatctaag
aaaggcatcaaggagatcgacgaggcccatccttgttatgccatgaagtacctcaagaac
aaacccgtcaaggacctaaaggatgaaatgttcatcaagctctctcagggagaagaggac
ggactcctgactatcacaatttttattgatgatatggcagagggttcccagacctacttt
gaggaagttcgccaactgttctacagggatgaatttagtcacctggtacaacagtggaat
cttcagaggagccaagctctggagcgagccctcactaagctcctttaccctcagatggag
aaggagctcagagccaagctcattgctgaagcaaaggaaggaatactcaaagcttgctgt
cgtaagttatacaactggctaaaagtagcaccctaccaggcggatcaacaacttgaggac
gactacgatgacgatgagaaggaagttcttcgtgtcttaggtctctccttcatcaccgcg
agagacacacctggttttggtgctctgattgatggagaaggccaggttacagacttcatt
cgaatgccatacctgacgaagcgacgcaatgcttggagacaagtggacaaggatggcaag
gcacaagatctggaaaaaatcaaagattttattgccactaagaaaccgcatgtggtggct
gtgtcagcagagtcaaggaaacttgatggcctggatgtgagtacacaggggtctgactgt
ggtaggaaacttgatggcctggatgtgagtacacaggggtctgactgtggtaggaaactt
gatggcctggatgtgagtacacaggggtctgactgtggtaggaaacttgatggcctggat
gtgagtacacaggggtctgactgtggtaggaaacttgatggccaggatgttagtacacag
gggtctgactgtggtaggaaacttgatggcctggatgtgagtacacaggggtctgactgt
ggtaggaaacttgatggcctggatgtgagtacacaggggtctgactgtggtaggaaactt
gatggcctggatgtgagtacacaggggtctgactgtggtaggaaacttgatggccaggat
gtgagtacacatgggtctgactgtggtaggaaacttgatggccaggatgtgagtacacag
gggtctgaatgttgtaggaaacttgatggccaggatgtgagaaaacagggtctgaatgtg
attgagttccgtgactatccggtggtactgcgacacgctgtttccatagccaggcgacta
caggacccgctcattgagtttgcccagctgtgtaatgtggatgaggacattctatgtctc
aaataccaccccatgcaggatcagattcctaaagatgatttgttaaatgcgctgtcactg
gagtttgtgaacagagtcaatgaggttggggtggacatcaaccgagccatcgctaacagt
cacacggcaccccttgtacagtttgtgtgtggactaggacctaggaaggcatcacaactc
ctcaagattttgaagcaagccaacattcgcctagaaaacaggacacagctggtggaggtg
tgtcacatggggcccaatgtcttcatcaactgtgctggcttcataaagattgacaccagt
agtctgggcgatagcacggatgcatacattgaagtgttggatggctcgcgtgtccatcca
gagaactacgagtgggccagaaagatggctgttgacgcgctggagtatgacgatacggct
gaggatgccaaccccgccggagcactcgaggaaatcctggagtctccagagcgtctgaag
gacctcgatcttgatgcatttgcagaagagcttgaacgacagggatatggtgacaaacac
atcacactttatgacatcagggccgagttaaatcaccggtacaaggatctgagaacgccc
taccgatcaccgttaaacgaggagcgcttcaacatgattaccaaggaaacaccagagacg
ttctatgtcggtaaactgattttgacaactgtggcgggaattgctcatcgacgaccccgt
ggagaccagttggaccaagcaaaccccgtccgggaccaggaaacagggctctggaaatgt
cccttctgtaacaaagacgatttcccagaactgagcgaggtgtggagtcattttgacgcg
ggaagctgtccaggctcggctgttggtgtgagaactaggctggacaatggagtgaccggt
ttcatccacaccaagaacataagtgacaaaatggtcaagaatccggaggatcgagtcaaa
gttggaatgactattcatagccgtatcacaaaaatcgatattgaccgcttccaggtggat
ctaacatgtaaatcttcagaccttatggataaagatggaaactggaagccacctaaagat
ctgtactacgaccaggatctagagaaggaaagtgctgaaaaagaggaagagaagcgcaaa
caacaggcgcgacagagtaggtgtctcttgtcaaataaaactaaggacagagaattaaca
ggcgtgacagagccacctaaagatctgtactacgaccaggatctagagaaggaaagtgct
gaaaaagaggaagagaagcgcaaacaacaggcgcgacagagtatgtgtctcttgtcaaat
aaaactaaggccggagaattaacagggtcgacagagccccctaaagatctgtactacgac
caggatctagagaaggaaagtgctgaaaaagaggaagagaagcgcaaacaacaggcgcga
cagacatatacaaagcgagttattgctcacccgtcgttccataacatcggttataaggag
tgcgagaagctcctcagtgacatggatcaaggggaggcaatcatcagacctagtagcaag
ggttcagatcatctgacagtgacatggaaggttggcgagggagccatgcagcacatagat
gtgaaggagaggggcaaggaaaatgctttcagtctgggaaccactctcgtcattggtaat
gaggagtttgaagatcttgacgaaattctcgcccgtcatatccaaccaatggcagccctt
gccagggacatcatgaactttaagtaccacaaggagtttgagagtgggaaacgtgaaacc
ttagataaaattctgttagaggagaaaaaaaagggtccttcaaggattccttattacctg
agcctgtctaaacagtaccctggaaagtataccatatcctacatgccacgtacgaaggct
cgccatgagtttataaccctgttgccagatggactgcgataccgacagcaaactttccat
tccctgaattcactgattcgctggtttaaggaacatttcagagacccaataccaggtacc
cctgctagtgctcgaacccccatggtgtcatccaactacgccacaccaagtatcaacctg
caaggtgtggatgctgctaccatccagagagccgccgcaggattgcctagcaatatctac
aatacgctcgcccaggtggcaggcgcggccacgcctcgtatcccacgaaccacgccgggt
gccactccacagttcggctctgccctgcatggcgcaggattcaatatacccctgggaact
acacctcttatgacccccatgatgaccccacaacaccacataactactccacaagtgctc
aacacgccctcctaccagccaacaccccgtgctgcagtcacgcctgtgtggccaggtgct
actcctcgggctactccccgcagtatgggaacaccatcgcatccttcccagcagtcacag
aggcccgcacctagctccacgcaagagtgggctaaaccaggaaccgattgggccaaggct
gcggccatgtgggccaagggacgacaaaaacccagcacaccccgctcaggacagagtcca
gcggtacgagccagtccaatggaacagggcgactccacacctctcattgacgagcgatga
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integrated database retrieval system
