Mizuhopecten yessoensis (Yesso scallop): 110461446
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Entry
110461446 CDS
T05079
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110461446
03015 mRNA surveillance pathway
110461446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110461446
03041 Spliceosome [BR:
myi03041
]
110461446
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110461446
Spliceosome [BR:
myi03041
]
Complex C
Other components
EJC/TREX
110461446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
110461446
NCBI-ProteinID:
XP_021370573
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MADVRGVSALQDELEKAKESLKDVDDNIKKLTGRDPTEPRPSTRRVTAVPDGRGRERLLL
QARWGPDEDVQAKRRVTGGAFSRLGPMHRMMGRGRPPRGQDNGDDDDLPNKPTIQSSVVA
TPKESRTRQSSIEEQNSDRKGTARNRRMFGLLLGTLRKFKDEAKETEDKEVQRKQIEQKL
EEKAISEKEDLLRERHQLFLERKQQQAKIRRLEYKMELIEIHDAWEKETRKLENFIYTRA
KPHIFYFPKTMDAVLEGKRKETAKYVDDMIEDRRRKLQIEIEDLMAKDQPGGKVDVEGDE
EEEDEGVMEGDRNTDKENRRRKSSGERVDLRRQLEQRGPHRGGRDGETPRKRRKSDSVAE
EDRHSRAGKHRRRSKEEGDRLGGRRDKAGAPRRDDKAKDRTEPRVEISYNDEEEEEEEGE
LRTDSTNNNSNNNEDVKDTRTVEQTDAKSERMDTDETQVQLTKSAKQTQAMMAEDEEEGE
EGEVHDAVDE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtgcgtggagtctcggcgttgcaagacgagttggagaaagcgaaagagagc
ttgaaagatgtagacgataatattaagaaactaacaggaagggacccaacagaaccaagg
ccctcaacaaggcgtgtaacagctgttcctgatggcaggggtagggagcgcttgcttcta
caggccaggtggggcccagatgaggatgtccaagccaagagaagagtcactggaggcgct
ttctctaggcttggtcccatgcatcggatgatgggcagaggccgtccaccaagaggacag
gataatggggacgatgatgatctacccaacaagcccactatccagtcctccgttgtagct
acccctaaagagtccaggacacgtcagtccagcatagaggaacagaattcagacagaaag
ggcactgccagaaatagaagaatgtttggcttacttttgggaacactgagaaagttcaaa
gatgaagctaaggaaacggaggataaggaagttcagagaaaacagattgagcagaaatta
gaagaaaaagccatttcagagaaagaggatcttcttagagaacgccatcagcttttccta
gagcgaaaacaacaacaggccaaaattcgtcgtcttgaatacaaaatggaacttattgaa
atacatgatgcctgggaaaaggagacacgcaaattagaaaattttatttacaccagagcc
aaaccacacatattttactttccaaaaaccatggatgctgtattagagggaaaaaggaag
gagactgctaaatacgtggatgacatgattgaagatcgaagaaggaaactgcagattgag
atcgaagacctgatggccaaggaccagccgggaggaaaggttgatgtggagggagacgag
gaggaggaggatgaaggggtcatggagggggacagaaacacagataaggaaaacagacgt
aggaaatctagtggggagagggtagacttacgtaggcagttagagcagaggggcccacat
agagggggtagggatggggagacacctagaaaacgcagaaagtctgatagtgtagcagag
gaagacagacacagtagggcaggtaagcacaggaggagaagtaaggaggagggggatagg
ttggggggcaggagggacaaggcaggggcaccaaggagggatgacaaggcaaaggatcgc
acagaacccagggtggaaataagttacaatgatgaggaggaagaggaggaggaaggtgaa
ctccgaaccgactctaccaataataacagtaataataatgaggatgttaaggatacgcgg
acagtagagcagacagacgcgaaatctgaaaggatggacacagacgaaacgcaggttcaa
ttgaccaagagtgcaaaacaaacacaagctatgatggctgaagatgaggaggagggagag
gaaggggaggtacatgatgctgtagatgaatga
DBGET
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