Mizuhopecten yessoensis (Yesso scallop): 110461709
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Entry
110461709 CDS
T05079
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myi03016
]
110461709
Enzymes [BR:
myi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
110461709
Transfer RNA biogenesis [BR:
myi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110461709
Prokaryotic type
110461709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
110461709
NCBI-ProteinID:
XP_021371001
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MAEQEPAVKKMKLAVKGNGNAAVPVGVPVKDAIKTEEIENVKEEIEEVEHFKETDVGILA
FISDLPGFQGIIKQRFSDFIVNEVNEKGEVVHLTSTPAKTVPDVEIIKTENLTSTEIKEP
EEESKPAVPTPVKCSQLPDAEVDELNKLLQSTDKSMIVTLQAGDDKEKRCHIHRAIRTCF
SNMESTTVEVDGQKVIQVKKLPPPKKAKGGFRQGSYHQRRSWSSEQGDYCRFTLYKENKD
TMDAIFKLAHMLHVNKGIFQYGGTKDRRAKTTQEVTAYKVWKEKLEAVSPTLWNMKLGDF
RYVDKPLRLGQICGNKFSIVLRNVTEPDDSKINKAMASLRDFGFINYFGMQRFGTTSIPT
YHVGRAILNSEWEETVNLIMKPRPWEYGEIAECRRIWWDKRDCSAALKVYPKRFSIERTL
LQGLKKNGKNFCGAFGMIPRNTRLMYLHSYQSYIWNCVVSRRIHEFGMRPVIGDLVLPQE
STDVDLNQEHEGEEDDDDNNGKRFQMQPIVVDESNIKDYTIYDVVMTIPGFDVMYPENSV
KSWVTEMLEKDKLTIESFRHKNRQYALKGTYRKMLIRPTDVTWQMYKYDDVVQPLVLSDM
DRLEGVPEPQSIPGGALKALKLEMTLPPSCYATMALREVLKMDTSSAHQSSLNPTLDVNT
SEDKPMDTLA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggagccagctgtgaagaagatgaagttagcagtgaagggcaatggaaat
gctgctgtaccagttggggtgcctgtcaaagatgctatcaaaacagaagagattgaaaat
gtgaaagaagaaattgaagaagtagaacattttaaagagactgatgttggaatacttgcc
tttatcagcgatttaccaggtttccagggtattatcaaacaaagattctcagatttcatt
gttaatgaagtaaatgaaaaaggagaagtggtccatttaacttctaccccagccaaaact
gtaccagatgtggaaattatcaaaactgagaatctcacatcaacagaaatcaaggagcca
gaagaagaatccaagcctgcggtaccaacgcctgtcaagtgcagtcagctgccagatgct
gaagtggatgaactcaacaaactcctgcagtctacagacaagtctatgatagtcaccctt
caggcaggagatgacaaggagaagaggtgtcacatccacagggccatcaggacctgcttc
tcgaacatggagagtaccacagttgaggtggatggacagaaagtcatccaggtcaagaaa
ctacctcctcccaagaaagctaaagggggctttcgccaggggagttatcatcaaagacga
agctggtctagtgagcagggtgactactgtcgcttcaccctctacaaggagaacaaggac
accatggatgccatctttaagcttgcacatatgttacatgtcaataagggaatattccag
tatggtggaacaaaggacagacgagccaaaacaacacaggaagtaactgcctacaaagta
tggaaagaaaaactagaagctgtcagtccaaccctatggaatatgaaattaggagacttc
agatatgtggacaaaccactgcgacttggacagatctgtggaaacaagttttctatcgtc
cttagaaatgtgactgagcctgatgactctaagatcaacaaagcaatggcgtccctccgt
gactttggtttcatcaactactttggcatgcagagattcggaaccacatccattcccact
taccatgtcggaagggctatacttaacagcgagtgggaggagacagtgaacctcatcatg
aaaccacgaccgtgggaatatggtgagattgctgagtgtcgtcgtatttggtgggacaag
agagactgtagtgctgccctcaaggtctaccctaaacgcttttccatagagcgtaccctc
ctgcaaggcctcaaaaaaaatggcaagaatttttgtggtgcatttgggatgattccacgg
aacacacgactcatgtacctacacagttatcaaagctacatctggaactgtgttgtgtca
cgcaggatccacgagttcgggatgaggccggtgatcggggacctggtgcttcctcaggaa
tctacagatgtggatctgaatcaggagcatgagggagaggaagatgatgatgacaataac
gggaagagattccaaatgcagccaatcgtagtggacgagtccaacataaaagactacacc
atttacgatgttgtcatgacgattccagggtttgatgtcatgtatccagagaattcagtg
aagagctgggtcactgagatgttggagaaggataaacttacgattgagagttttcgccat
aaaaacagacagtacgcactgaaaggaacctacaggaagatgctgatcaggccaacagat
gtgacttggcagatgtacaagtatgatgatgtggtgcaaccactagtgcttagtgacatg
gaccgactggagggtgtgccggaaccacagtctataccgggtggcgccctgaaagccctg
aagttggagatgacactgccaccatcctgctatgcaactatggctctccgagaggttctc
aaaatggacacttcatccgcacatcagtcctccctaaatccaacactggacgtcaacact
agcgaggacaaacccatggacacccttgcatga
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