KEGG   Mizuhopecten yessoensis (Yesso scallop): 110462861
Entry
110462861         CDS       T05079                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03030  DNA replication
myi03410  Base excision repair
myi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110462861
   03410 Base excision repair
    110462861
   03420 Nucleotide excision repair
    110462861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:myi03032]
    110462861
   03400 DNA repair and recombination proteins [BR:myi03400]
    110462861
Enzymes [BR:myi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110462861
DNA replication proteins [BR:myi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    110462861
DNA repair and recombination proteins [BR:myi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      110462861
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 110462861
NCBI-ProteinID: XP_021372767
LinkDB
Position
Unknown
AA seq 2279 aa
MVLQNSGRFKADRSDKTERYGTNREDSSEKRLQRATLNDETDTKFGFERYKDPVERTGWL
INMHPADILDENKRLISAVDYYFLEEDGGRFKATLPFRPYFFVATKKEFEREVASFLTKK
FSGKVTSVETVYKEDLDLANHLVGLKRTYLKLSFLSVEDLTKVKREINPAVTKNKEREKS
SEAYTAMFSSYLTGDNNAANSKKMVDQMDNLLDIREYDVPYHVRVSIDLKINVGHWYSVR
GRGSLPVEIRPREDLVDRPDPVIMAFDIETTKLPLKFPDSATDQVMMISYMIDGQGYLIT
NREIVAQDVEDFEYTPRPEFEGPFIIFNEPDEMTLLRRFFDHILDVRPHIFVTYNGDMFD
WPFVESRAALHGLDMSQEIGFQKDIQGEYKSRPSIHMDCLRWVKRDSYLPVGSQGLKAVA
KAKLRYNPVEMDPEDMCRMASEEPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPME
PDEVLRKGSGTLCEALLMVQAYHANIVFPNKQIAVFNKLTEDGHVLDSETYVGGHVEALE
SGVFRADLPCRFRMVPEAFQNLIDKVHKTMKHAIEEEEKIPMDTVTNLDEVCTDIIERLA
MLRDCPNRLENPIIYHLDVAAMYPNIILTNRLQPPAIVDEATCAACDFNKPGAVCQRHMT
WMWRGETMPASRSEFHRIQQQLENEKFPPFAPGGEPRAFHQLNREEQATIEKKRLADYCK
KAYKKVHSTKMEERTATICQRENSFYVDTVRDFRDRRYEFKGLVKVWKRKLAEAEELKDA
AEIKRANGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVCYTGAHIITKAKE
IVEQIGRPLELDTDGIWCVLPATFPENYVLKTTNPKKAKVTVSYPGAMLNIMVKEFFTND
QYEELVDPNKLQYSLRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAEL
KGFEVKRNGELELIKIFQSSVFEAFLKGDTLEECYAAVAKVADYWLDVLFSKAANMPDSE
LFELIAEKKRMSRTLEDYGSQKSMSISTARRLAEFLGDQMVKDAGVSCNYVISKKPDGAP
VTERAIPLAIFQAEPSVRKHYLRKWLKSPATNEFEIREILDWEYYVERLGGSVMKIITIP
AALQLVANPVPRIRHPDWLHKKLLERNDVFKQKKISEIFAPTQRQKLQQSSEELFPDSEQ
QRSTVDIEDIGGRSRGKTGLGMAIAHKRKRTSLDNTDTSQNESQLLESSQTWREMLGPAP
PMGKTKEERAVWLEYHKKKWELQAKDRQDRKRRRVDFGDAPSGRAVSSRTGLGGFLRRTA
RSIMDMPWQIVQLMETSYPGQYKLWALIGSDLHAMKLNVPRIFYVNQKSPKEGEGALWKK
VIKTLPRSHPVFNLYEYNVPEDVYQEHINEISADLSSPDIEGVYETQVPLEFRALVRVGC
VATVNRDFAKYMSGRETDTFDMENLDFRTLAQFTYLEPGAIKHLYLYHHICGTKSIFGLF
FPMSKKATVFVVDTVRSDQMPNLSALYNGERNGKVSKGAAEEMLPPSHHTFDIKLEKDVR
QVHRTIQRILSAYKDEKRGPTFIAVQSPHDFQHLTSSMPGLQDFPLVPVHISDSDTLYNV
LDWQRVGSRRMLQHYLNVDIILHAMVEQCRYLHIPVGNMPRDITLYGCDLFLARHLHKHN
HILWCSTTERPDLGGKEADDSRLCMELEENSSVELNQPGTFPSVCVELDIASLAVNTIIE
SSHVNDQEGASAASFDTMPQSSLEDMVQGQGAATYLASYDETALCSTTFRILKSMVQGWV
KDVTMYGNVFADNQIIHFYRWLRSTGAQLYDPALRRTLHNMMKKVFMQLIAEFKRLGSTI
VYANFNRIVLCTKKRRLVDALSYVEYITNSIKSRELFHLVELSYEQCWEYSIWLDPANYG
GVKGRLPSAATTDSSQPDPDREAEQDSEDEEPKQAEEEELNKSDEGEEPEIEMNWNIMHF
LPEAGACQTNFNMIVAGYILSVYTNVMEEHQRLTPGNTPVKRRHNSQSQSQQKPLDTSAT
PATVTFSQELIAGELAQQMFAITQKIQKKLAGNTNNAAIEFPQRPGSHLLLKNPALEFVK
CVCQVLALDSNITLQISKLKRDLLKLIGVGEFSSDAKFLDPCLSYVLPEVICKSCNHVRD
LDLCRDPYLNHNDSNAAWSCVQCKAAYDMTEMEQCLIDSINRKSMAYVLQDLKCVKCQGV
KESNMMKYCKCAGDFTTTAALKDFEKRLCTFRGIASHYNMVVLMETVDWIIKMNPNIAS
NT seq 6840 nt   +upstreamnt  +downstreamnt
atggtcttacagaacagtgggagatttaaggccgatcgatcggataagaccgaaagatat
ggtaccaatcgagaagattcttctgaaaagagattacagcgagcgaccctgaacgatgaa
actgatacaaagtttggatttgaaagatacaaggatccggtggagaggacaggatggctt
atcaacatgcatccggcagacattttggatgaaaacaagagactcattagtgctgtggac
tactatttcttggaagaagatggtggacgatttaaggcaaccttgccatttcgcccctac
tttttcgtggccaccaagaaggagtttgagcgagaagtggcgtcattcctcaccaagaag
ttttctggaaaagttacctcagtggaaacggtgtataaagaggatttagatctggccaat
catctagtgggcttgaagagaacctacctcaagctgtccttcctctctgtggaggacttg
accaaggtcaagcgggagatcaaccccgccgtcacaaagaataaggagcgcgagaagtcc
agcgaagcctacacagccatgttctccagctacttgactggcgacaacaatgccgccaat
tccaaaaagatggttgaccagatggacaacttgctggacatcagagaatacgatgtacca
taccacgtgagggtgtcaatcgacctgaagataaatgtaggtcactggtactcggtccgt
gggcgtggctctctacctgtggagattcgacctcgagaagacttggtggacaggccggat
cctgtcatcatggcgtttgacattgagacgactaaactcccactcaagtttcccgactct
gccaccgaccaggtgatgatgatatcctacatgattgacggccagggttacctaattact
aatagagagatcgtcgcccaggatgtcgaggactttgagtacacaccacggccagagttt
gagggtcctttcatcatatttaacgaacctgatgagatgaccttgctgcggcgatttttt
gaccacatactggacgtgagaccacacatctttgtgacttacaatggagacatgtttgat
tggccatttgtggaatcgagagctgctctccatggattggacatgtcgcaggaaataggc
ttccagaaggatatccaaggagaatacaagtctcgaccatctatacacatggactgtcta
cgctgggtaaaacgagacagttaccttcctgtaggtagtcaaggcctaaaagctgttgcc
aaggccaagctgaggtacaacccagtagaaatggatcctgaggatatgtgtcgtatggct
agtgaggaaccacaggtgctctctaactactccgtgtccgacgctgtagctacctactac
ctgtacatgaagtatgtccacccgttcatatttgccctgtgtacgatcatccctatggag
ccagacgaggtgctaaggaagggatccggaacgctgtgtgaggcccttctcatggtccag
gcctatcatgccaacatcgtattccccaataaacagatagctgtattcaacaagctcacg
gaggacggacatgtactggactctgagacatatgtaggaggtcacgtagaggcactggag
tccggagtgttcagagccgaccttccctgcaggtttagaatggtgccggaagcgttccaa
aacctcatagataaggtgcacaagaccatgaagcatgctatcgaagaggaggaaaaaatt
cccatggatacagtgacgaacttagacgaggtctgcacggacatcattgaacgtctggcc
atgctgcgggactgtccgaaccgcctggaaaaccccatcatttatcatctggatgtggcg
gccatgtacccaaacatcattctcaccaacagactacagcctccagcaattgtagacgag
gcaacgtgtgctgcgtgtgactttaacaagcccggtgctgtgtgtcagcgtcacatgaca
tggatgtggagaggagaaacaatgcctgcctcacgcagcgagttccaccggatacaacaa
cagttggagaatgaaaagttcccgccatttgcccctggaggggaaccccgggcatttcac
cagctcaaccgtgaggagcaggcaaccatagagaaaaaacgattggctgactactgtaaa
aaggcctataaaaaggtccattctacgaagatggaggagagaaccgccacaatttgtcag
agagaaaactctttttacgtcgacactgtcagggatttccgagacagacgttatgaattt
aaagggcttgtgaaggtgtggaagaggaaattagcagaggctgaggaattgaaagatgca
gctgaaataaaacgtgccaacggtatggtggtcctttacgactcgctccaactcgcccac
aagtgtattctgaactctttctacggttatgtgatgagaaaaggagctcgttggtacagt
atggagatggccggagttgtgtgttacactggggctcacatcatcaccaaagcgaaggaa
atcgtcgaacagatcgggcgccctctggagctagacacagatggtatttggtgtgtttta
cccgcaactttccctgaaaactatgtcctcaagactacaaacccgaagaaagcaaaagtg
accgtctcctacccaggggcaatgctcaatatcatggtcaaggaattcttcaccaacgac
cagtatgaggagttagtagaccctaacaagctccagtactcattacgcagtgagaactcc
atcttcttcgaggtggacggtccatatctcgctatgattctccccgcgtctaaggaggaa
ggcaaaaagctcaagaagagatacgctgtcttcaactttgatggttctcttgctgagcta
aagggatttgaggtaaaaaggaacggtgagttggagctgatcaagatcttccagtcgtca
gtgtttgaggcgttcctgaagggtgatacactggaggagtgttacgcagcagtcgccaag
gtggccgactactggctagacgtcctcttcagcaaggctgccaatatgccagactctgaa
ctctttgagttgatcgccgaaaaaaagagaatgtctagaactctggaggattatggttcc
cagaagtccatgtccatcagcacagcgaggcgattggccgagtttctcggtgaccagatg
gtgaaggatgcaggtgtaagttgtaactacgtcatctccaagaagccagacggtgcccct
gttactgaaagggctataccactggcaatctttcaagcagagccaagtgtacggaaacat
tacctgagaaaatggctgaagtctcccgcaaccaatgaatttgaaattcgagagatcctt
gactgggagtactacgtagaaagactcggtggatctgttatgaagatcatcaccattcca
gcagcattacaattggtagccaatccagttcctcgaatccgccaccctgactggcttcac
aagaagttactggagcgtaatgatgtgttcaaacagaaaaaaatcagcgagatatttgca
cccactcagcgacagaaactccagcaatcttctgaggaactgtttcctgacagtgaacag
cagaggtcaacggtagacattgaggatatcgggggtcggtctcgaggcaaaactggattg
gggatggccatagctcacaaacggaaacgaacaagcctggacaacaccgacaccagtcag
aacgagtctcagttactggagagctcgcaaacgtggcgggaaatgctgggaccggcgcca
cctatgggtaaaacaaaggaggagcgtgcagtctggctggagtaccacaagaagaaatgg
gagcttcaggcgaaggaccgacaggatcggaaacggcgcagggtcgactttggtgatgct
ccctcgggccgagcggtcagtagccggactggacttggaggattcctgcgccggacggct
cgcagtatcatggacatgccttggcagatagtacagctgatggagacaagctaccccggt
caatacaagctgtgggctctcatcgggagtgacctccatgccatgaaactcaacgtacct
cgcatcttctacgtcaaccagaaatcaccgaaggagggcgagggagcattgtggaagaag
gtgattaagacgttaccacggtcccaccctgtgttcaacctttacgagtacaacgtaccg
gaggacgtctaccaggagcatatcaatgagatcagtgctgacttatcatcccccgacatt
gagggtgtgtacgagacacaagttcctttggagttccgtgcacttgtccgggtgggatgt
gtcgccaccgtcaaccgtgacttcgccaagtacatgtctggcagggagaccgacacgttt
gacatggagaaccttgactttcggacactggcccagtttacttacttggagcctggcgcc
attaaacacctgtacctgtaccatcacatctgcgggaccaagtctatatttgggctgttt
ttcccaatgtccaagaaggccacagtttttgtagtggacactgtccgaagtgaccagatg
cccaacctctcggctctctacaacggagagcgcaatggaaaggtatcaaagggtgccgct
gaagagatgttaccgccctcccatcacacatttgacatcaaactggagaaggatgttcgc
caggtccaccgaaccatccagaggatactgtccgcctacaaggacgagaaacgaggaccg
acatttatagctgtccaatcaccacatgatttccaacacctgacttcaagcatgccaggt
ctccaagacttccctctagtacctgtacacatctcagacagtgataccctatataatgtg
ttagactggcagagagtcgggagtcgacggatgttacagcactacctcaacgtcgacatc
atcctccatgcgatggtagagcagtgccgttacctccacatacccgtgggcaacatgcca
cgtgacatcacactgtatggctgcgacttgttcctggcccgccacctccacaaacacaac
cacatcctgtggtgttctacaactgagcgaccagacctcgggggcaaggaggcagatgac
agcaggctgtgtatggaactagaggagaatagcagtgtagaattgaaccaaccgggtacc
ttccccagtgtatgtgtggagctagacatcgccagtctggctgtcaacaccattatagag
tcatcccacgtaaatgaccaggagggagcgagtgctgcgagtttcgacacaatgccgcag
tcgtcgttggaggacatggtccagggacaaggtgctgccacctatctggccagctacgac
gagaccgcactgtgctcaaccacgttccgtatcctaaagagtatggtacagggctgggtc
aaggacgtgacgatgtacggaaatgtgttcgcagacaaccagatcatacacttctacagg
tggctgcgatccaccggagctcagctctacgatccagcactgagaaggactctgcacaac
atgatgaaaaaagtcttcatgcagttgatagcagaattcaaacgccttggatcaacgata
gtgtacgccaactttaatcgaattgttctgtgtacaaagaagcgccgcctggtggatgct
ctatcctacgtggagtatatcaccaacagcataaagtcccgagagttattccacttggtt
gaactctcctatgagcagtgctgggagtactctatttggttggatccagctaattacggg
ggagtgaagggaagactgccatcggctgcaacgacggacagttcccaacccgaccccgac
cgagaggcggaacaagatagtgaggatgaggagccaaaacaggcggaggaggaggagctt
aataagtcagatgagggggaggagccagagattgagatgaattggaatatcatgcatttc
ctaccggaagctggagcgtgtcagacaaactttaatatgatagtggcgggttacatactg
tcggtgtatacgaacgtgatggaggaacaccagcgactcacgccagggaacacgccggtc
aaacgtcgccacaactcccagtcacagtcacagcagaaacctctggatacgagtgcgacc
ccggccactgtgacattttctcaggaactgatagctggcgaacttgctcagcagatgttt
gctattacgcagaaaattcagaagaagctggctggaaacacaaacaatgctgccatagag
ttccctcagagacctggctctcacctgctgctgaaaaacccggccctggagttcgtcaag
tgtgtctgtcaggtgttggccttggacagtaatatcaccctacagatctccaagctgaag
cgagaccttctcaagctgattggagtaggcgagttctccagtgatgccaagttccttgat
ccttgtttgtcctatgtccttccggaggtcatatgcaaatcgtgtaaccatgtccgtgac
cttgacctctgcagagatccctacctcaatcacaatgactccaatgcggcgtggtcgtgt
gtacagtgtaaggcagcctatgacatgacagagatggaacagtgcctcatcgactccatc
aaccgcaagtcaatggcttatgtactgcaggacctgaaatgtgtcaaatgtcagggggtg
aaagagagtaacatgatgaagtactgtaagtgtgccggagactttacaaccacagctgca
cttaaggacttcgagaagaggctctgtacattcagaggcatcgccagtcattataacatg
gtagtactgatggagacagtggactggatcatcaagatgaacccaaatatagccagctga

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