Mizuhopecten yessoensis (Yesso scallop): 110462903
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Entry
110462903 CDS
T05079
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03420
Nucleotide excision repair
myi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110462903
09124 Replication and repair
03420 Nucleotide excision repair
110462903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myi04121
]
110462903
03400 DNA repair and recombination proteins [BR:
myi03400
]
110462903
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110462903
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
110462903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
110462903
NCBI-ProteinID:
XP_021372819
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MLKFLANRQSGSNDPLVMRRAESTRRSYALDLSKRRDFEVVHLGGINSLDIDPVEARYLL
SGSSDGSVAVHDLENFTGEVKYTSKSVCFAGRGSRHRHKHTVETVIWYPLDTGMFISSGT
DKLLKVWDTNTLVPADEFEFSGIVYCHAMSSVATKHCLISVACQSSTLKLVDLKSGSATH
TLKGHKTAVLSTKWSTRDEFVLASGGEDNQVLLWDIRSAKGALKSLDQYNGKNANNHFTA
NTAHSGHVNGMTFTSDGLHLVTFGTDDRIRLWNVASGKNTMVNYGKVNNEWKKNIDIGIT
QGCSPDILFVPNGTNIEMLDLFKGSQIDFLRGHYMRVNCCITHPHYQELYSGGSDRNILV
WTPDTDSAYEDYLKEKHEADKEQVSRIAGVVARSISATADAWSSDEDS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtttctggccaacaggcagtctggttcgaacgatccgttggtcatgaggaga
gccgaatcaactcgacggtcgtacgctctcgatttgagcaaacggcgtgattttgaggtt
gtacatcttgggggcataaactctttggacatcgaccccgtggaagcaagatatttgtta
tctggaagttctgatgggtctgttgctgttcacgatcttgaaaatttcactggtgaagtt
aaatacacttccaaatcagtgtgctttgctgggaggggcagtcgtcatcgccacaagcac
acagtggaaactgtcatctggtaccccttggatactggaatgttcatctctagtggaaca
gacaaactcctcaaagtttgggacactaatactctagtgccagcagatgagtttgagttc
agtggcattgtctactgccatgcaatgtcctcagtagccacgaagcactgtctgatctca
gtggcatgccagagttccaccctgaagttggtcgatctcaagtctgggtctgccacacac
actctgaagggtcataaaactgcagtcctctctacaaagtggtcaacaagggatgaattt
gtacttgcatcaggaggcgaggacaaccaggtgttgttatgggatatacggagtgccaaa
ggagctcttaaatcactggaccaatacaatggcaaaaatgccaacaaccatttcacagct
aacactgcacacagtggtcatgtcaatggtatgaccttcacatcagacggccttcatttg
gtgacctttggaacagacgaccgtatacgactctggaatgtggcctctgggaagaacacc
atggtcaactatggaaaggtgaataatgagtggaagaagaacatagacattgggatcaca
caaggctgtagtcctgacatactctttgtacctaatggtaccaatatagaaatgctcgac
ttattcaaaggcagccagattgactttttacgtggtcactacatgcgtgttaactgttgt
ataactcatccacactatcaggagttgtactcgggtggtagtgacaggaatattttggtg
tggacaccagataccgactcggcttatgaagactatctcaaggaaaagcatgaggcagat
aaagagcaggtgtcgcggatagctggtgttgtggctcgcagtatatcagccacagctgat
gcctggagtagcgatgaggacagctga
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integrated database retrieval system
