Mizuhopecten yessoensis (Yesso scallop): 110463036
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Entry
110463036 CDS
T05079
Name
(RefSeq) uncharacterized protein LOC110463036
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110463036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110463036
03400 DNA repair and recombination proteins [BR:
myi03400
]
110463036
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110463036
Messenger RNA biogenesis [BR:
myi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
110463036
DNA repair and recombination proteins [BR:
myi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
110463036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
ResIII
DUF7790
Motif
Other DBs
NCBI-GeneID:
110463036
NCBI-ProteinID:
XP_021373049
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MNEQCRRLCELGFKATYIGKDGSDTEGILAGHFDFVFGGAEHLVEDTRWRAMLKSDPYQS
KLGLIVVDEAHTVIQWGEGTEKEGPFRGSFSRIGELRSLCNKVQMLALTATAGPTGRRKI
MKSLCFKSSSEVILDSPDRPNIKITSVRIPNNDDLSTVFKFLIDDFLNQKETLPRHVIFC
ESIANVSKVYLTFLKHMGQSRNLFEMYHSKTNDKIKEQIRKDMAENDKIRILICTNSAGM
GVSFHNVHNVIHYGLPREMDTFVQQMGRAGRDGEYSKQLILYKMHKGHLSRVEGDLVKLV
KDDATCRRKTLCDSYVTVHEPVIPKHKCCDVCEKQCDCGEESCPDIHRALAADPENMEDE
TVEMEREVTRDDRKLLRHKLSVLKYSLESDLSNVLITSEILHGITDQVIDDIVLKCHTIF
TTSDILKMFPVWSFEIAVQIMKEINTVTGDSDMYDR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaatgtcgccgtctctgtgaattaggattcaaggccacgtatatcggaaag
gacggcagcgacactgagggtattttagccggacattttgattttgtatttggtggcgcg
gagcatttggtagaggatacaagatggcgagctatgcttaaatctgacccctatcagagc
aaacttggcctgatagttgtggatgaagctcacaccgtaatacagtggggcgaaggcaca
gagaaggaaggaccattccgtggcagtttttccagaataggagaattgaggtcgctgtgc
aacaaggtacagatgctggctttgactgcaactgctgggccaacagggagacgaaaaatt
atgaaatctttatgctttaaatcatcatcagaggtgattcttgattctccagacaggcct
aacattaagataacttcagtgcgtattccaaataatgatgacctttccactgtgttcaag
ttcttaattgatgactttctaaaccaaaaagaaacattaccgagacatgtgattttttgt
gaaagtatagcaaatgtttcaaaagtgtatttaacatttctaaaacatatgggacagtct
cggaatctctttgaaatgtaccacagcaagacaaatgataaaattaaggagcaaattaga
aaagacatggcagaaaatgataaaatcagaattctgatttgtaccaattcagctggtatg
ggtgtcagttttcataatgtgcacaatgtcattcattatggcttacccagagaaatggac
acttttgtacaacaaatgggtcgagcagggcgtgatggagaatacagcaagcaacttatt
ttgtacaagatgcacaagggacatcttagtagagtggaaggtgatttggtgaaacttgtg
aaagatgatgccacatgcagacgtaaaacactgtgtgattcatacgtgacagtacatgaa
cctgttattccgaaacataaatgttgtgatgtctgtgagaaacaatgtgattgtggtgaa
gaatcctgccccgatatccatagggcattggcagctgatcctgaaaatatggaggatgaa
actgttgaaatggagcgagaggtaaccagagacgacagaaaacttttgcggcataaactt
tcggtgttaaaatattcacttgaatcagacctaagcaatgttttaataacatcagaaatt
ctgcatggaatcactgatcaagtaattgatgatattgtgcttaagtgtcatacaattttt
acgacatcagacattctaaaaatgttcccagtttggtcgtttgaaatagctgtccagatt
atgaaagagataaatactgtgactggtgattcagatatgtatgacagatga
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