Mizuhopecten yessoensis (Yesso scallop): 110463037
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Entry
110463037 CDS
T05079
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
myi03037
]
110463037
Cilium and associated proteins [BR:
myi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
110463037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
EIF3I
TPR_IFT80_172
TPR_COPA_B
PPR_2
WDR90_beta-prop_4th
TPR_2
TPR_1
TPR_GEMI5
Beta-prop_IFT122_1st
DUF2524
RickCE_cat
Motif
Other DBs
NCBI-GeneID:
110463037
NCBI-ProteinID:
XP_021373045
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MAVYFDHRLETDRSGINTDASWFSGAPMIAVTSYSDENGGTVNLFLEEGEKLLNIPLHRA
GQATSVAWHPTKKIVAVGWENGELLVWNEVDHELFEGLPLHKTAITVLHWSSSGSRLSSG
DKAGVLMVWKSDGKGRLQQNPLHQHHVQEPLSKILYRPIPPPDPEHDIAALARAAVSGDE
KALDLFTWKSKGKGNSKMSSMFGPTEALTFFVGGESGGVYYVNENGQCTQIFSVDTAILR
FLYYEEKNVLITVTENMMLTQHAIMPEGDAKELMRVKMSGRGENPVICWAGKSIVATATG
EGVVRMWDLDHEENYILSLDGHGSYDKSENIMCISYCEEKGVLAGGTNLGNIALWRYAPP
LGSRLVDGEKKWKLQAPATVEGSIRQLSWGSKKNLLAVNTIANVFMLNEQTMSSSFSGQT
AVVQFGPSSLALEMFATGTHHDLKTEVQVKGVCTTKDTLAVWNGRKVITYEYSEDRTIIK
GAGTFATETMEVRLYEQNVYCVEIGKVQVRTHQGTVKQVINFSDAEGQPVSLDVCGTSLV
IATDNGVVRVYDLSRREAKPTSQPKNLGDVIPGFNGILSARCNSNGSKVSVLVKNNSSHA
DPKLYFWDVESDVVSYFNFESGRGEQDDFPPEQIEGVEGDTNDAERGKNQAAKDIAGRYP
MTHHWDPHDTKLIVCEAKVMASAVEKKEKEEKKRHSLTKAVEEGPVEVMVVSLFCTPENG
ILIQDSFQMPEQFQALLGIEVPYYYNIKKSENLKEEEQEKDDTPQPENLIKSDTVIQPKL
VARKTMRDFVGLENSDKNTREAMMNFSYYLTIGNMDEAFKSIKLIKSESVWENMAKMCVK
SRRLDVASVCLGNMGHARGAKALREAMKEPELDAKVAVLAMQLGLKEDAERLLKNCKRYD
LLNEFYQSSGQWIKALETAEMYDRIHLRATYYNHAKHLEVKGDYSDAIPNYEKSDTHRFE
VPRMLFDEPEALEQYISRHKDKALHKWWAQYMESTGEMDAALQYYETAQDFLSLVRVYCY
CGKMDKASEICNETGDRAACYHLGRQYENQDLIKEAIHFFQRAQAYGNAIRLCKEHGYED
QLLNLALLGRPEDMMEAARYYEQKQGSEDKAVMLYHKAGNFSKALDLSFRSKQFGALQMI
SGDLDERADPELLQRCGDFFMDNGQYDKAVDLLAIGKKYWEALKICMDQHVEITEDLAEK
LTPNKDDMGIDTMERVKILEAIAEVCMHQGQYHLATKKFTQAGNKIKAMKALLKSGDTEK
ITFFAGVSRQKEIYVMAANYLQSLDWRKDPEIMKNIIGFYTKGRALDSLAAFYDACAQVE
IDEYQNYDKALGALGEAYKCLSKTKMSDEMLQEEKLSRLKNKITLIKKFVTARRAYDENP
EDAIKQCQVLLEEPHLDDSVRMGDVYGLIIEHYARRERWKAAYAAMEEMKSRIPALNMAY
YVNMRTIESVHRALDIPLSRTITSKMNGMYGGGGEEEDGEIVEEEVDQMYTAGDDV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtattttgatcaccgcctggaaactgaccgatctgggatcaacacagatgcg
tcatggttcagtggtgccccaatgatcgccgtcacatcatacagtgatgagaatggtggc
actgtcaatctttttttggaagagggtgagaaattgttgaatattccattacatcgtgcg
ggtcaagcaacctctgtggcatggcacccgacaaagaaaattgttgcagttggctgggaa
aacggagaactgctggtttggaatgaagttgaccatgagttatttgaaggtttaccacta
cacaaaacagccatcacagttttacactggagctcctctggctctcgactgtcttctggg
gacaaggcaggtgtactgatggtgtggaagtctgacggcaagggtcggctacagcagaac
ccattgcaccaacaccatgtccaggaacctcttagtaaaatattgtacagacccattcct
ccaccagacccggaacatgatatagcagcacttgctagagctgcagtcagcggggacgag
aaagctttagatctcttcacgtggaaatccaaaggcaaaggcaattccaagatgtcttcc
atgtttggtccaacagaagcgttgactttttttgttggtggtgaaagtggcggtgtgtat
tatgtaaatgagaatggtcagtgtacacaaatattttctgtggacactgctatccttcgg
ttcctgtactatgaagaaaagaatgtattgatcacagtcacagagaacatgatgcttaca
cagcatgccataatgcctgagggtgatgctaaggagctgatgagggtgaagatgagtggc
aggggagagaaccctgttatctgttgggctggaaaaagtattgtagccactgctacaggg
gagggtgttgtcaggatgtgggatctagaccacgaagaaaactatattttgtcattagat
ggacatggtagctacgacaaatcagaaaacatcatgtgtatcagctactgcgaggaaaag
ggagtacttgctggaggcactaaccttgggaatatagcgctgtggaggtatgctccgccc
ctaggtagtcggctggtggacggggaaaagaagtggaagcttcaggcaccagctactgta
gaaggcagtatccgacaactgtcttggggatcaaagaagaacttattggctgtaaatacc
attgcaaatgtgttcatgctcaacgaacagacaatgagctcgagtttttctggtcagaca
gctgtggtgcagtttggccctagttcccttgccctggagatgtttgccacaggaacacac
catgacctcaaaacagaggtccaggtcaaaggtgtctgcactactaaggatactttagca
gtgtggaatggcagaaaagtgataacttatgaatattctgaggacagaactatcattaag
ggtgcaggaacatttgctacggagacaatggaagtgcgactttacgaacagaatgtttac
tgtgtagaaatcggcaaggttcaggttcgcacccaccagggtacagtaaagcaggtcatc
aacttctcggacgctgaggggcagcctgtcagtttagatgtttgtggtacatcactagtc
atagccacagacaacggagtggtccgtgtatatgatttgtcaaggagagaagcgaagcca
acgagccaaccaaagaatttaggggatgtcattcctggttttaatggaattttatctgcc
aggtgtaattcaaatggatctaaagtcagtgttcttgtgaaaaataattccagccatgcc
gatcctaagctgtacttttgggatgtggagtcggatgttgtttcttactttaactttgag
agtgggcgtggagagcaggatgacttccccccagaacagatagagggtgtggagggggat
acaaatgatgcagagaggggcaagaatcaggctgctaaggacatagctggccggtaccct
atgacccaccactgggaccctcacgacaccaagctgattgtctgtgaggccaaggtgatg
gctagtgctgtggagaagaaggagaaggaggaaaagaagcgccactctctaactaaggcc
gtagaggagggaccagtggaggttatggtggtgtccctgttctgtacaccagagaacggc
atcctcatccaggacagcttccagatgccggagcagtttcaggccctacttggcatagag
gtgccctactactacaacattaagaagtctgagaatcttaaagaggaagagcaggaaaag
gatgacacaccacaaccggaaaatctcattaagtccgacactgtaatacaaccaaaactg
gtggccagaaaaaccatgcgtgactttgtaggtctagaaaacagcgacaagaacacgaga
gaggctatgatgaacttcagctactatctcaccattggcaacatggacgaggcatttaaa
tccatcaaactcattaaaagtgaatctgtgtgggagaacatggccaaaatgtgtgtaaaa
agccgacgtttggatgtggctagtgtttgtctaggcaacatgggtcatgcccgtggtgct
aaggccctcagggaggccatgaaagagccggagctggacgccaaagtcgctgtccttgct
atgcaacttggactcaaggaagatgcagagagattactgaagaactgtaaacgatatgat
ttactgaatgaattctaccaatcatctggccagtggattaaggcattagaaacagcagaa
atgtatgatcgtattcatctcagagccacctattataaccatgcaaaacacttggaagtc
aagggggactactctgatgcgataccaaactatgagaagtcggacactcatcgctttgaa
gttccaaggatgttatttgatgaacctgaagcgttagaacaatacattagcaggcataaa
gacaaggcactacataaatggtgggcccagtacatggagagtacaggggaaatggatgca
gccctgcagtactacgagactgcccaggatttcctctctctggtccgagtctactgctac
tgtggcaaaatggacaaggcttcagaaatctgtaatgagacaggtgacagggctgcctgt
taccacttaggtcggcaatatgaaaaccaagacttgatcaaagaagccattcactttttt
cagcgagcacaggcatatggaaatgctattcgactgtgcaaggaacatggttatgaagac
cagctgctgaatctggcattactcggccgtcctgaagacatgatggaagcagctcgctac
tacgaacagaaacaagggtctgaggacaaggctgtcatgctgtatcataaggcaggaaac
ttctccaaagcattggatctgtccttccgatccaagcagtttggagctttgcagatgatt
tctggggacttggacgagcgagcagatcctgagttattgcagagatgtggtgactttttc
atggacaatggtcaatatgataaggctgtggatctcctcgccatcggcaaaaagtactgg
gaagctctgaagatttgtatggaccagcatgtggagataactgaagacctggcagagaaa
ctcactccgaacaaggacgacatgggcattgatacaatggagcgggtaaagatcctggag
gccatcgctgaggtgtgcatgcatcaaggccagtaccacctcgctacaaagaagtttact
caggctggtaacaagatcaaggctatgaaagcgttgctgaaatctggagacactgagaag
ataacgttttttgctggtgtatcacggcagaaggagatttatgtaatggccgccaattat
cttcagtctctggattggaggaaagacccagaaatcatgaagaatattatcggcttctat
actaaaggaagagcactggattctttagcagcattttacgatgcttgtgctcaggtggag
atagatgagtaccagaactacgacaaagccttgggtgctctgggtgaggcctacaaatgt
ttaagtaagacaaagatgagcgatgaaatgctacaagaggaaaagctgtcacgtctcaag
aacaagatcactcttattaagaagtttgtgactgctagaagggcgtatgatgaaaatcca
gaggacgccatcaaacaatgccaggtgttactggaggaaccacatctagatgattctgtc
cgtatgggagatgtgtatggcctcatcattgagcattatgcaaggagagaacgctggaag
gcggcctatgctgcaatggaggagatgaagagtcggataccggcactcaacatggcgtac
tacgttaacatgaggacgatagagtctgtgcaccgggcactggacatccctctgagtagg
actatcactagtaagatgaacggcatgtatggagggggtggggaggaggaggatggtgaa
atagtggaagaggaagtggaccaaatgtacacagctggagatgatgtgtga
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integrated database retrieval system
