Mizuhopecten yessoensis (Yesso scallop): 110463226
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Entry
110463226 CDS
T05079
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
myi01002
]
110463226
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myi04121
]
110463226
Enzymes [BR:
myi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110463226
Peptidases and inhibitors [BR:
myi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110463226
Ubiquitin system [BR:
myi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110463226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DUF6279
Motif
Other DBs
NCBI-GeneID:
110463226
NCBI-ProteinID:
XP_021373325
LinkDB
All DBs
Position
Unknown
AA seq
2624 aa
AA seq
DB search
MTIVMRGSPAGGDSPQDNTQQQQQPQGGGQPPHAGQAGQAGQAGTAAQPPQQPPQPSGSA
QQPQQPSPGQSSTSTDVDGSQDDTTMVAVDLVEGQVPDFPLQELSRLDEMINRPRWVVPV
LPKGELEVLLDAAIKLCKEKLDTRSEHCQRFFREGLNTSFTKIMTDEAVSGWKYEIHRCI
LKNAEKMIELSVSKLTDDWFPLLELLAMVLNPVCKFHTYNGTRPSDSVPANTTVADDVLY
ARPPDPRTPRGWLVDLVNKFGTMEGFSILLERFTGGPQLSVPVIAALIKPFGQCAEVLTP
HCVEKYFMPIVAVVPKFLDSLTDEELKKESKTEAKNDALSSIIKALKQLVYRLPNQDEKI
KALETFRLKMILRLLKISSFNGKMNALNEVNKVIANVSFQSSRHSQVDEDEWLTAEKMAE
WIQNNHVLTIVLGDSLHQPQYVEKLEKILRFMIKEKALTGSDLDTLWEAQSGKHDAIVKN
VHDLLAKLAWDFSPEQLDHLFEAFQGSWAQASKKQREKLLELIRRLAEDDKEGVMAHKVL
GLLWNLAHSEDVPTEIMDQALNAHIKILDYSCSQDRDTQKMTWITKFVEELKNDKWVLPS
LKQIREICQLFPETNGSPTQAPQNFPHPPQRTPHVYYRNMVISQLQSNHSIVMLLAQNLS
SYMTKARAYAKEFPESDSANILPDGRFNHILQIQERLRFLRFLLKDGQLWLCESQARQIW
QCLAENAIYTTDRESCFKWFAKLMGEEPDLDPEITRDFFEQNILQLDPSLLTENGMNCFE
RFFKNVNVKESKLIAKRRGGHMMDDMELIGLDYMWRVVLLSPDEVSNKAITLLKDIFTNL
GPRLLQNQVEIHEDFIQSCIDRLKAIYDTVSVLEKDKDSTNRVMQETTRMVRVLTVLKEY
VGECDEAYNEERTILPLSRACRGRLVSLILRFPSQGRQPDDLDIWSHTNDTVGAIRRQVL
TRVKAASNIKVDLYANGEILDPAEDKRLISQVPLRDKTLISAKLVQVGNNMPSSPDSSSD
SSAGSPHHTFDGPNVEAENCLPGVLISNSFKYTQFLFQLSDLGCQLQVPKLRDTARILLK
IMPADTHTVDKLRSICAENTRSETSLSQQLELMFFNSSTTQTLYNIEVCYSLLMPAGEPL
SEDAFDFQFNFVKSGGVQLALNMLTKNNFMPAADLHSKRNVYVTVMKVCKLMLTTVSHAK
FQVVVDACNADPQSPNITAAEHNHAVILQQALQYIPNPTSEFTTKNVAMRLGQQLLDQAT
KTIPDLATIKAIQKIAWASSSSSLHLVHATNEEIHKAHEKPKDHTDFDDLTVAREALEVL
TVCLALCPPALDALNKDKAWQIFIKDLLLLCSHSHVRVAGAEQFYLMATRCCGGTRPMVF
FITLLFCELNESVKENAKQAHEYFSLLCKLLNYACASDVRLPNAEKLLSNEIDWLIKTRD
DVVNTGEVVVEEALLGGHLGITRELLAFQSSEKKCNIGSEKGGANLIKEIVEDFLFPASK
IVLQSRKLNGEFPSDQAVPVCSASSTVIAAFELLVALCTNCLPNLRCLAGMLTEMFYNGE
QPLNEWEYLPPVGPRPIKGFVGLKNAGATCYMNSVLQQLFMIEQIRTGILAVEGVADDIE
EEYVGDEKSESEVRQTNVDMGDEERKDEEKSVSNKDEARKEYHQGVLKQIQLIFGHLATS
KLQYYVPRGFWKHFRLWGEPVNLREQHDALEFFNSLVDSLDESLKALGQPTILSKVMGGS
FADQKICKDCPHRYQREEPFTTLNVDIRNHQNLLESLEQYVKGDLLEGANAYKCEKCNKK
VDTVKRLVIKKLPKVLAIQLKRFDYDWERESAIKFNDYFEFPREIDMEPYTVQGLAKIEG
EIIDDDFDTKPQSTKYKLFGVVVHSGQASGGHYYSYVLHRGEDNQVKWYKFDDGDVSECK
MEDDEEIKNQCFGGEYLGEVFDHMLKRMAYRRQKRWWNAYILFYERQDETEDEKHIYKSL
QDLTIANKPSQVKMPGTIEKCVRKQNIMFMHEKSQFCPEYFQFMKKLLTCNPMYHCADKV
NADAENVAMISTELAAKFLFHVGFHTKKTLRGPANEWYEALSCHLRPSKKVRTWFAQHVL
FAHPNRFAEYLLECPTSEVRTAFCKTVVCLSHFALRDGPCPPPLVQGLYAGHPADPNATL
SDHLLLAVLHLLKKEVSEHGRHLQQYFHLFLMYANLGQDEKMQLLKLNVPSMFMLVALDE
GPGPPIKYQYAELSRLYSVVSILIRCCDVSTRCLSSNGEPAKANPHGDSSVQNSLMPIQS
QVSDILYGRTSYVKKLIEDCNNTEDTTKLLRFCCWENPHFSSTVLSELLWQVAYSYTYEL
RPYLDLLLQMLLLEDSWQNHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKMMVS
LFTLCRPAAEMLQTNGDLKRKWTWAVEWLNDELERRPYPGNTQYTYNNWSPPAQSNETSN
GYFLERSHSARETLSKAFELCPEEEPEDGYLTDEQETPATEDAVPPTYPPGQTQPPTTTS
PPTSASQTQPPTQPASQPPTQPPASQTPTQPPASQPPSQTPVQNNQVNVSHVSPQPIHPS
NQINNQLNQQTSPATPAPTTGGQSDNPDTGEEEVDNGNKKTTPE
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgttatgagagggagtccagctgggggagactccccccaagataatacacaa
cagcaacaacagccacaggggggaggccaaccaccacatgctgggcaggctgggcaggct
gggcaggcaggaactgcagcccagccaccccagcagccaccgcaaccctccgggtcagcc
cagcagcctcaacaacccagcccaggacagtcatccaccagcactgatgttgatggtagt
caagatgacaccaccatggtcgctgttgaccttgttgaaggtcaggtaccagattttcct
cttcaggagctgtcaagactcgatgaaatgataaatcgtcctagatgggttgtcccagtt
ctgccaaaaggagaactggaagtacttctagatgctgctataaaactctgcaaagagaaa
ttagacaccaggagtgaacattgccagaggtttttcagagaaggcctcaatacttctttc
accaaaataatgactgacgaggcagtgagtggatggaaatatgaaattcatagatgtatt
ttgaagaatgcagaaaagatgattgaattatctgtgtcaaaactaaccgatgattggttc
cctctcctggaattattggctatggttttgaaccctgtttgcaagttccatacctacaat
ggcacaaggccatcagatagtgttcctgctaacacaactgtagcagatgatgttttatat
gcccgaccacctgacccacgtacacccaggggctggttggtagaccttgtaaacaagttt
ggaacaatggaaggattctcgattctgctggagcgctttactgggggaccacagctgtca
gtacctgttatcgctgccctcatcaagccatttggacagtgtgccgaagtgctaacccca
cactgtgtggagaaatactttatgcctatagttgctgttgtgccaaagttcctggactca
ttgactgacgaggagttgaaaaaggagtctaaaacagaagcaaagaatgatgctctgtca
tctataatcaaagcccttaaacaacttgtgtacagactaccaaaccaggatgagaaaatc
aaagctttagagaccttcaggctcaaaatgatactacggttactgaagatctcatctttt
aatggtaaaatgaatgccttgaatgaagtgaataaggtgatagccaacgtgtcattccaa
tcaagtcgacattcacaagtggatgaagatgaatggctaacagcggagaaaatggcggag
tggatacagaacaaccatgtgttgacaatcgtgctgggagacagtctacatcagccccag
tatgtggagaagctggagaagatcctacgcttcatgatcaaggaaaaggctctgacaggc
agtgacctagacacactttgggaggctcagtctggcaaacatgatgcgattgtcaaaaat
gtacatgacttgctagcaaagttggcgtgggatttttcacctgaacagctagatcacctg
tttgaagctttccaggggagttgggctcaagcctcaaagaagcaaagagagaaactcctg
gaactgattcgtagactcgcagaggatgacaaagaaggtgtgatggcacacaaggtgctg
gggctgctgtggaacctggcacacagcgaagatgtacctactgagatcatggaccaggcc
ctgaacgctcacatcaagatccttgattacagctgttctcaggacagagacacacagaag
atgacatggataacaaaatttgtggaggaacttaagaatgacaagtgggtacttccatct
ctgaagcagatcagggaaatatgtcagctgttcccagagactaatggttctcctacccag
gctccacagaactttccccacccaccacagcggactccacatgtttactacaggaacatg
gtcatcagtcagctccagagtaaccattccattgtcatgttactggcacagaatctctcc
tcctacatgaccaaggccagggcctatgcaaaagagttcccagaatctgactctgctaat
atcttgccagatggccgatttaaccatatactacagatacaggaaaggttgagatttcta
aggttcctattgaaggacggtcagctgtggctgtgtgaatcccaggcaagacagatctgg
caatgtctagcagagaacgccatctacaccactgacagggagtcctgcttcaagtggttt
gcaaagctgatgggagaggaaccagacttagacccggagatcactcgagatttctttgaa
caaaatattcttcagctggatcccagtctgctcacagaaaatggaatgaactgtttcgag
agattctttaagaatgtgaatgtaaaggagagtaaactaatcgccaagcgaaggggagga
cacatgatggatgacatggaattgattggtctagactacatgtggagagttgtgcttttg
agtccagatgaggtgtcaaacaaagctatcacattactcaaagacattttcaccaacttg
ggtccacgtttgttacaaaaccaagtagaaattcatgaggactttatccagtcctgtatt
gatagactcaaggctatatacgatactgtgagtgtgctagagaaggacaaagacagtaca
aaccgtgtgatgcaggagacaacgcggatggtgcgagttctaactgtgttaaaggagtac
gtcggggaatgtgatgaggcttataatgaggagagaactatccttcctcttagtcgagct
tgccgagggagattggtgtctttgatactgagatttcccagtcaaggtcgtcagccagat
gaccttgacatctggtcacacacaaacgatacagtaggtgcaatacgaagacaggtgtta
accagggtcaaggctgccagcaacatcaaagtggatttatatgcaaatggagaaatcctg
gatccagcagaggacaagcgcctcatttcacaagttcctctccgcgacaaaactcttatt
tctgccaagcttgtccaggttggaaacaacatgccctctagtccagatagtagctcggat
agctctgcgggctccccccaccacacgtttgatgggcccaacgtagaggcggagaactgt
ctcccgggagtgttgatatccaacagtttcaagtacacccagttcctgttccagttatct
gaccttggttgtcagttacaggttcccaaacttcgagacactgccagaatacttctcaaa
ataatgcctgccgatactcacactgtggataaactgcggagtatatgtgcagaaaacact
agatctgaaacctccctatcacaacagttagagctcatgtttttcaattcctccacaaca
cagaccctgtacaatattgaggtgtgctacagtttactgatgcctgcgggggaaccgctg
tcggaggatgcctttgactttcagtttaattttgtgaagagtggaggagtgcagttggca
ttgaacatgttgacaaagaacaatttcatgccagctgcggacttgcattcaaagaggaat
gtgtatgtgactgtgatgaaggtgtgtaagctgatgttgacgacggtgagccacgccaag
ttccaggttgtagttgatgcatgtaatgctgaccctcagtccccgaacatcactgcagcg
gagcacaatcacgcagtgatcctacaacaggcactccagtatatccccaaccccacctcc
gagtttaccaccaagaatgtcgccatgcgtctaggacaacagctattggaccaggcaaca
aagacaatacctgacctagccaccataaaagctatacagaagatagcctgggcctccagt
agtagttctctacaccttgtccatgctaccaacgaagaaatccacaaagcccacgaaaag
cctaaggaccacactgactttgacgatctgactgtggcacgtgaggcccttgaagtgttg
actgtgtgtctggcattgtgcccacctgcattagatgccctcaacaaagacaaggcgtgg
cagatcttcatcaaagatctcctcctcttgtgtagccacagtcatgtgcgggtagcaggg
gcggaacaattctacttgatggctacacgctgctgtggagggacgcggccaatggtcttc
ttcatcactcttctcttctgtgaactgaatgaatctgtgaaagagaatgcaaagcaggcc
catgaatacttcagtctactttgcaagttgttgaactatgcatgtgcaagtgatgtgagg
ctgccgaatgcagagaagctgttgagtaatgaaattgactggttgattaaaacaagggat
gatgtggtaaacacaggagaggtggttgtagaggaggccttgttagggggacatcttggg
atcacacgtgaactcttagcattccagtcgtcagagaaaaagtgcaacattggctcagag
aagggaggagctaatctcatcaaggagatagtggaggatttcctattcccagcgtctaag
atagtgctgcagagtaggaaactaaatggggagtttccgtcagatcaggctgtaccagtc
tgttctgcgtcttcaactgtgatagccgcgtttgaacttttagtggcactttgtacaaat
tgtctccccaaccttcgctgtcttgccggaatgttaacagaaatgttttacaatggtgaa
cagcctctcaatgaatgggagtacctacctcctgttggtcctaggcccattaaaggcttt
gtggggctgaagaatgctggtgctacctgttacatgaactcggtcctacagcaactgttc
atgatagaacagatacggacggggatccttgcagtagaaggtgtggcagacgatattgaa
gaggagtatgttggcgatgaaaagagtgaaagtgaggtaagacaaacaaatgtggacatg
ggagatgaagagcgaaaggatgaagagaagtctgtgagcaacaaggatgaggcacggaaa
gagtaccaccagggtgttcttaaacagatccagctcatcttcggccacctagccaccagc
aagctgcaatattatgtccccaggggattctggaaacactttaggttatggggtgagcca
gtgaacttgagagagcagcacgatgccttagagttcttcaacagcctggtggacagttta
gatgagtctctcaaggctctcggacaacccaccatcctctccaaggtgatgggaggctcg
tttgctgaccagaaaatctgtaaagactgtcctcataggtaccagagggaggaaccgttt
accacattaaatgtggacatacgtaaccaccagaaccttcttgaatcactggaacagtac
gtcaagggggatttactagagggggccaatgcatacaaatgtgagaagtgtaataaaaag
gttgatactgtaaaaagacttgtgataaagaaactgccaaaagtcctagccatccagctt
aagcgatttgactatgactgggaaagggaaagtgcaataaagttcaacgattactttgag
tttccgagggagatagacatggaaccctatacagttcaggggctagccaagattgaaggt
gaaataatagacgatgattttgatacgaagccacagagtacgaagtacaagttgtttggg
gttgttgtccacagtgggcaggctagtggtggccactactactcgtatgtattacacagg
ggtgaagataaccaggtgaagtggtataagtttgacgatggtgacgtatcggaatgcaag
atggaagatgatgaggagataaagaaccagtgttttggaggagagtacctgggagaggtg
tttgaccacatgctgaagaggatggcatacagacgacaaaagcgttggtggaacgcttac
atcctgttttatgaacgtcaggacgagacggaggatgaaaaacacatctacaagtcattg
caggacctcaccatagcgaacaagccatcacaagtaaagatgcctggcactattgagaag
tgtgtgaggaaacagaacattatgtttatgcatgagaagagtcagttctgtcccgagtat
ttccagttcatgaagaagttgttgacgtgtaacccaatgtatcactgtgccgacaaagtg
aatgctgatgctgagaatgtggccatgatcagtacagagctagcagcaaagttcctattc
catgtagggttccataccaagaaaacattgaggggtccagctaatgagtggtatgaagca
ttaagctgtcacctacgaccaagcaagaaagtacgaacttggtttgcacagcatgttctg
tttgcccatcccaacagatttgcagagtacctactagaatgcccaacatcagaagtaaga
acagcattctgtaaaacggttgtgtgtctgtcccactttgccctacgggatgggccatgc
ccaccaccactggtacaaggattgtatgctggacacccggctgaccctaacgccactctg
agtgaccacctgttgctggctgtgctacacttactgaagaaggaggtgtcagaacatgga
cgacacctacaacagtacttccacctgttcctaatgtacgccaaccttggacaggatgag
aaaatgcagctgttgaaactgaatgtgccgtcaatgtttatgctggtggcattggatgag
ggaccagggccaccaatcaaataccagtatgcagagttaagtcgactctattctgtggtg
tcaatcctcatccgatgttgtgatgtgtccacccgttgtctttcatccaatggtgagcca
gccaaggccaacccccatggtgacagttctgtacagaactccctgatgcctatacagtca
caagtgtcggatattctgtacggacgtaccagctatgtcaaaaagttgattgaggactgc
aacaatacagaggatactaccaaacttctaaggttctgttgctgggaaaatccacacttt
tcatcaacagttctgagtgaactactttggcaggttgcatattcctacacgtatgagcta
cggccttacctggatctcctcctccagatgttactcctggaagattcctggcaaaaccat
cgtatacacaatgccttgaaaggtataccagatgaccgcgacggcctgttcgacaccata
cagaggtccaaaaaccactaccagaaacgagcgtaccagtgtatcaagatgatggtgtcg
ctgttcacattatgccgtccagctgccgagatgttacaaaccaatggtgacctcaagcgc
aagtggacctgggcagtggaatggttgaatgatgaactagaaaggaggccatatccaggg
aacacgcaatatacctacaacaactggtccccacctgcacagtctaacgagacatccaat
ggatatttcctagaaaggtcacacagtgccagagaaacattatcaaaggcgttcgagctt
tgtcctgaagaggaaccagaggatggttacttgacagatgaacaggaaacacctgccaca
gaagatgctgtaccacctacctatcctccggggcagacacaacctccaacaaccacaagt
cccccaacaagtgcatcacaaacacagcccccaactcaaccagcctctcagcctccaact
cagccaccagcctctcagactcccactcagccaccagcctcccagcctccgtctcagaca
ccggtacaaaataaccaagtgaatgtaagtcatgtgtcaccacagccaatacaccctagt
aaccagatcaacaaccagctcaaccaacaaacctcaccggccacacctgcccccacaact
gggggtcagtctgataacccagacacgggggaagaggaggtggacaatggcaacaaaaaa
acaacgcctgaatga
DBGET
integrated database retrieval system
