Mizuhopecten yessoensis (Yesso scallop): 110463379
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Entry
110463379 CDS
T05079
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110463379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110463379
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110463379
mRNA cycle factors
Common to processing body (P body) and stress granule
110463379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
zf-AD
Motif
Other DBs
NCBI-GeneID:
110463379
NCBI-ProteinID:
XP_021373588
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MFRGTCKTSSFSAKQAEALKASVSDSNKGISETWVARQRLEDLYKKLLLMDLEYALDKKV
EQDLWNHAFKNHINSLQSQTKDKQNPKRGETQATLNLFLETASGFYLQLLQLICTTFKLD
LPFRRKSSCFGILKEKIPMKVKITPPKKSSCLYICQHCLVHLGDIARYRQQIEQAQTYYW
HAANLLPFNGQPYNQLAIVEAAYGNKLSTVFYYIRSLAVRHPFPVAATNLEKLYNKLAKD
PCELKGKLSVSEMITAFLQFQAFIHMCVELQRAELLSEKLVAALPAHVTSQSFPSGILVQ
IIAINIFAMQHARRQLSSDSEDLSNGHLYESLTVDEETSFQLMFKFTILVLDVLLQYTPK
QEQKLRDFFTLPAVKLLLDWFKLNPEHLHNPILKTSSLWVNLCKVLNNIRPSSAPKEGKL
DIGKYEDLPLTEDAELRCFQPLEKAHSGFSFSRVPSEGLPSEVESQLRCRRLLAHGHWIA
EEYPGLNLMNIQANKIGKVQFTAPSAPVKVTASLTPIKVIGTTSAPVKVMSPSVLVKTGT
AASESQPFQSSPERKPVRQNVAIQAIIQKQSQTNKDQGSGEKAITIIQQPSDKVKAVEGV
ERGGKLCPPKYILGVPTSEPLFMKPSGGRPSTGGTVGTGRPPTQTPPRLQKQQQLQLAQQ
QMQTHPEEEEGMEEEDQSSWQPVHQHQISSQDQTSKQTKIAWQLTSQQSAKDAPPQLLTS
QQTAGYPKQQAGPQFSPQPLNSQALSPGQQRQVASPHQPPRMTSPLAHPAQSPKPVMILQ
SDFRSPPRKPVTQQQKQQEHHQHLQQPQQQGHSASSPSSEFDMIGYTQHMANQDGGSMRG
GNFDPNILYRTSGPGQHNALQGLQQDISPVQGQVQGQGHEGSNDNAELRSSQHQRHARSH
PAGVLDPNMSFVNPPSGAPMIGKQGNNMRPPSQQGSQVGNHFSRNYPPPNMNMYYGQQSN
MQRPPQSNHINQSSGSGTDHIPGVGGPLQGSHMNQTSGPGVDHIPGSREPEIGAVVGGMD
NMPGGHSYKGQSNRSLIPGPIATHLQQHGPPPQQNQPQHGPPSQQNQQLRGPSLQQAQLR
GQPPQHTQLQRGLPPQHNQQQRGPRPLQSQQLRGQPLHQNQQLRGPPPQQNQQQRGQPLQ
THPSHTQSSAHSPGQPHPSRPQQPHPHQQPQQQQGVNPSYQGPMFNPINFLAGISRFNLA
NQNFGNMEGLDLIRQNLKKEDLPPNAADILGALSLLAVQPPRGMQDTLMVPNRHASFQGH
AEGTPKPDSSSPPSRSPLLTPEIEPRPPCQVTMPSPAPQQLGTYTLFSSSPWSVPLSTTD
TKSLASSPFSSESNSMRNSPDPPVDTYMENKPGSHGFEMGLRFGPTEDHSRREKGGQPMP
HPEVQPAQEQGGPGPFFPSTFQSIWSSGSSAGQSPLERLLEKQKRRQNDPH
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgggacttgcaaaacttcgagtttttctgcaaaacaagcagaagcgctcaaa
gcaagtgtatcagattcaaacaagggtatatcagaaacatgggtggccagacagagattg
gaagatctgtacaagaaactgctgttgatggacttggagtatgctcttgataagaaagta
gagcaagacctgtggaaccatgcttttaaaaatcacatcaacagtttacagtcccaaact
aaagacaaacagaaccccaagcgaggggagacccaggccacgctgaacctattcttggag
acagcaagtggcttttacctacagttgctgcagctgatatgtacaaccttcaaactggat
ctccctttcaggagaaaatcttcctgctttggcattttgaaagagaaaattcctatgaag
gtgaagataacaccccctaagaaaagttcctgcctgtatatatgtcaacactgtctggtc
cacctaggagacattgctcgttaccgacagcagatagaacaggcccagacgtactactgg
catgctgctaacctcctaccttttaatggccagccctacaaccagctggctatagtggag
gcagcctacgggaacaagctttccactgtgttctactacatccgcagtctggcggtgaga
cacccattccctgtggctgcaaccaacctggagaaactttacaacaaactggccaaagat
ccttgtgagttgaaagggaagctgtctgtcagtgagatgatcacagcctttctccagttc
caggcattcatacacatgtgtgttgaactccagagagcagagctgcttagtgaaaaacta
gtggcagccttaccagcacatgtaacgtcacagagttttccgtcgggtattctagtgcag
attattgccatcaacatcttcgcaatgcagcatgccaggcgacagttgtcgtcggactct
gaagatctcagcaatggacacctatatgaaagcttgactgtggatgaagagacttcattt
caactcatgttcaaattcacaatacttgtgcttgatgtgctgctacagtacaccccaaaa
caagaacaaaagttgcgtgatttcttcactctgcctgctgtaaaacttttgttagattgg
ttcaaactcaaccccgaacacctccacaatcctatcctgaagacctcaagtctgtgggtg
aatttgtgtaaagtcctgaacaacatccgaccatcatctgctcccaaggagggcaagctt
gacattggcaagtatgaggatttacccctgacagaggatgcagaactgcgatgttttcag
ccacttgagaaggctcacagtgggtttagcttcagtcgggtgccgagtgaaggcctgcca
tcagaagtggagtcacagctgcgctgtcgccgactgcttgcccatggacactggatagct
gaggaatacccaggcttaaacctcatgaatattcaagccaataaaataggcaaagtacag
ttcactgccccttcagctccagtcaaggtcactgcctcattgaccccaatcaaggttatt
ggcacaacatcagcgccagttaaggtgatgtcaccctcagtgcttgttaagaccggaacc
gcagcttcggaatcccaaccttttcaatctagtccagagagaaagccagtacggcaaaat
gttgctatacaggccattattcagaagcagagtcagaccaataaagaccagggcagtgga
gagaaggcaatcactataatacaacaaccttcagacaaggtgaaggctgtagaaggagtg
gagagaggtggtaagctgtgccctcctaagtacatactgggggttcctaccagtgaacct
ttgttcatgaaaccgagtggaggccgtccctcaactggaggcacagtagggaccggaaga
cccccaacacagaccccacctcgcctacagaaacaacagcagctacaacttgctcagcaa
cagatgcagactcatccagaggaggaagagggtatggaggaggaggatcaatcgtcatgg
caacctgtacatcaacatcagatatcctcccaggaccaaacaagcaaacaaacaaagatt
gcttggcagctgacctctcaacaatctgccaaggatgccccaccacaactgttgacctca
caacagacagctggatatccaaagcaacaggcaggcccacagttttctccacagccactg
aacagtcaagctttgtcaccaggacaacaaagacaggtggcatcccctcaccagccaccc
aggatgacttcacctctagctcaccctgcacagtctcccaaacctgtcatgatccttcag
tcagacttcaggtctccccctcggaagcctgtcactcagcaacagaaacaacaggaacat
catcagcacctgcagcagccacagcaacagggtcattctgcctcctccccatccagtgaa
tttgatatgattggatacacccaacatatggccaaccaggatggaggctcaatgcgagga
gggaattttgaccccaatattctatataggacgtcaggacctggccagcacaatgcttta
caagggcttcaacaagacatatcccctgttcaaggtcaagtccaaggtcaaggtcatgaa
gggtcaaatgataatgcggaattgcgatcctcacaacaccagaggcatgcccgatcacat
cctgctggagttcttgacccaaatatgtcctttgtgaatcccccatcaggagctcctatg
ataggcaaacaaggaaacaacatgaggcctccctctcagcaagggagtcaggtgggaaac
catttctctagaaattatcccccaccaaatatgaacatgtactatgggcagcagagcaac
atgcagaggccaccccaaagtaaccatatcaaccagtcctctggttctggtactgaccat
attcctggagtaggggggccactccagggtagccacatgaaccagacttcaggtcctggt
gttgaccatattcctggatcaagggaaccagagataggggcagtagttggtgggatggac
aacatgccaggggggcactcatacaagggacaatcaaatcgatcattaatcccaggtcca
atagccacacatctacagcaacatgggccaccacctcagcagaatcagcctcagcatggt
ccaccatctcagcagaatcagcagcttagaggaccatctttacaacaggcacaactgaga
ggacagcctccacagcacactcagctacagagaggactgcctccacaacacaatcagcaa
caaagaggacctcgtccactccagagtcagcagcttagaggccaacctctgcaccagaat
caacaactcagagggcctcctccccaacagaatcaacaacagagaggacaaccccttcaa
acacatccatctcacactcagagttcagctcattccccagggcaaccccacccatctcgc
ccccaacagccccaccctcaccaacagccccaacaacagcaaggtgtcaacccttcatac
caggggcccatgtttaaccctatcaacttcttggcaggcatcagtcggttcaaccttgca
aaccagaacttcggcaacatggagggactggacctgatcagacaaaatctgaagaaagag
gatctccctccaaacgctgctgacattcttggggccctgtcactacttgcagtacagcca
cccaggggtatgcaggacacgttgatggtacccaacagacatgcttccttccaaggtcat
gcagagggaacgccgaagccagattcctcctccccgccgagtagaagccccctgttgact
cccgagatagagccccggccaccctgtcaggtgaccatgccaagccccgcacctcaacag
ctgggtacctacacactgttcagcagttcgccgtggtctgtaccactgtcaacaaccgac
accaaaagtttggcctcatcgccattttcctcagagtccaacagtatgaggaattctcct
gacccacctgtggacacatacatggagaacaagcctggaagtcacggctttgagatggga
ctcaggttcggaccaactgaggaccacagcaggagggaaaaagggggacaacccatgcca
catcctgaagtgcagcctgcacaagaacaggggggcccagggccattctttccaagtacc
ttccagtctatctggtcatcaggatcctcggctggtcagtcaccattagaacgtctcctg
gagaaacaaaaacgtcgacagaatgacccacattga
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