Mizuhopecten yessoensis (Yesso scallop): 110463400
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Entry
110463400 CDS
T05079
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04120
Ubiquitin mediated proteolysis
myi04137
Mitophagy - animal
myi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110463400
04120 Ubiquitin mediated proteolysis
110463400
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110463400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110463400
04121 Ubiquitin system [BR:
myi04121
]
110463400
03029 Mitochondrial biogenesis [BR:
myi03029
]
110463400
Enzymes [BR:
myi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110463400
Membrane trafficking [BR:
myi04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110463400
Aggrephagy
Other aggrephagy associated proteins
110463400
Xenophagy
Other xenophagy associated proteins
110463400
Ubiquitin system [BR:
myi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110463400
Mitochondrial biogenesis [BR:
myi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
110463400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ChapFlgA
IBR
Prok-RING_4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110463400
NCBI-ProteinID:
XP_021373636
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MSIRKGEKLTGGDINTSVRKGEKLTGGDINISVRKGEKLTPGDINTSVRKGEKLTGGTCN
TNTSVRKGEKLTGGDINMSARKGEKLTPGDINMSVRKGEKLTGGDINTSVRKGEKLTPGD
TITSVRKGEKLTGSDTNTSVRQGEKLTGSDINTSVRKGELRYQYFVFCKECQCLQPGKLR
VSCQSCKSGYIILYRDPDNFDDVQQRGRINGECKSEQCNGQQREVEFYFKCTGHQGEERE
TAAVLKHVRPNRKHRLCVVCSETGSPVMVFPCERRHVICLDCFKSYCVVRLNDRGFTENE
NVGYSLPCPVGCPNSLIEDPHHFCLLGVDQYERYKSFATEEYVLQNGGVLCPAVGCGSGF
LLTEASRKVTCPTCQV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaggaaaggtgagaaactaacaggtggagatataaatacgagtgttaggaaa
ggtgagaaactaacaggtggtgatataaatataagtgttaggaaaggtgagaaactaaca
cctggtgatataaatacgagtgttaggaaaggtgagaaactaacaggtggtacatgtaat
acaaatacaagtgttaggaaaggtgagaaactaacaggtggtgatataaatatgagtgct
aggaaaggtgagaaactaacacctggtgatataaatatgagtgttaggaaaggtgagaaa
ctaacaggtggtgatataaatacgagtgttaggaaaggtgagaaactaacacctggtgat
acaattacaagtgttaggaaaggtgagaaactaacaggtagtgatacaaatacgagtgta
aggcaaggtgagaaactaacaggtagtgatataaatacgagtgttaggaaaggggaactc
cgttaccagtactttgtcttctgtaaggagtgtcaatgtctacaaccaggaaaactgagg
gtcagctgccagtcctgtaaaagtggatacatcatactctatagagatcctgataacttt
gatgatgtgcaacagagagggcgcataaatggggaatgtaagagtgagcaatgcaatgga
caacagagggaggtggaattttacttcaaatgtacgggacaccaaggtgaagagagagaa
acagctgctgtgttaaagcatgttcgacctaacaggaaacatagactgtgtgttgtctgc
tctgaaacaggatctcctgttatggtgtttccatgtgaacgacgtcatgtgatctgcctt
gactgttttaaatcctactgcgttgtgagactgaatgaccgaggttttacagaaaatgaa
aatgtaggctacagcctaccatgtccagttggttgcccgaattccttgattgaagatcct
catcatttctgtcttttaggagttgatcagtatgaaaggtacaagagctttgctacagag
gagtatgtcctacagaacggaggagtcctgtgtccagcagtaggatgtggctctggtttc
ctcttgaccgaggcttcccgaaaggttacctgccctacctgtcaggtgtga
DBGET
integrated database retrieval system
