Mizuhopecten yessoensis (Yesso scallop): 110464295
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Entry
110464295 CDS
T05079
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03008
Ribosome biogenesis in eukaryotes
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110464295
03015 mRNA surveillance pathway
110464295
03008 Ribosome biogenesis in eukaryotes
110464295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110464295
03009 Ribosome biogenesis [BR:
myi03009
]
110464295
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110464295
mRNA cycle factors
Stress granule specific factors
110464295
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110464295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_4
Motif
Other DBs
NCBI-GeneID:
110464295
NCBI-ProteinID:
XP_021375107
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MSSGLSWKTGRDGRRNFGDHDDRWVDHDNNNDQGRGGRGGGKFPYRGKSRGRGNGGFYSR
GSRGSYRNKYTSNSRPYNNRGRGSSRGNYKGGGAGPRDRLDDEGDCDMDNDGSGSSRFSP
YGRPDRRGSRNARGDYSSRGDSRRGSGGYSSGGGRFYNNGPQWYKVTIPKGKKSGKSVLL
QLINENIHTPFLPQNFHFEQDSAVFHIQDKDAADAVRAQSQRHTLPNGFKMIIIVKPSSP
PTNYIDKGTVEKLKAAMSRRYDSSAKLLDLSNLYQDSEMSQENLHLPLSRQNVMTQVVTI
IEENIPELEGIDVSNNRLISLEHLAKLTKICPNIVRVNLGKNSVRYLDELDKIKDWKVVE
LVLDGNELCDKFEDQAAYVSAVRKKFPKVMKLDGHDLPPPITFDLETSTDLPVTKGSFFL
NTEIQDILVKFLKEFFTIYDSDNRQSLTAAYQEEAIFSLSASKNNSTDHWQAGLQIYFPE
SRNLLRKSRDPSQKQRVLMRGKLNVVSKLCLLPKTTHDYNSFVVDVDHASQTLLSFTVTG
VFKESEERSDRQPVRAFSRRFIALPRGQGMVIANDMLMVTNASPSQAQAAFKNPAPTPSS
SPVPDTTPAAPFHQAGPSLTPEQQQMVQTFSAQSQMNLDFSAKCLEEHNWNYDGAGQAFL
SLQKENKIPPEAFVK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagggttgtcctggaaaactggacgggatggtcggaggaattttggagaccat
gatgaccgttgggtagaccatgacaacaacaatgatcaaggaagaggtggacgtggagga
ggaaagtttccttacagaggaaagagtcgaggccgtggaaacggtggattttactctcgt
ggtagtcgtggtagctatcgcaacaagtacacctcaaacagtcgcccctacaacaacagg
ggcagaggaagttcacgtggcaattacaaaggaggaggtgcaggtcctcgggacagacta
gacgacgaaggagactgtgatatggacaatgatgggtcagggtcttcaagattctctcca
tatggtcgaccagatcgacgtggctccagaaatgcaaggggagattattcaagccgagga
gacagtcggcgaggaagtggtggatattctagtggtggcggaagattttataacaatggg
ccccagtggtacaaagttacgataccaaaaggaaagaagtctggaaaatcagtgctactt
cagttgattaatgaaaacatacatactccatttctcccgcaaaatttccacttcgaacaa
gacagcgcagtattccatatacaagacaaggatgcagctgatgcagtccgtgctcagagt
caaagacacacactgccaaatggattcaagatgattattattgtgaagccttcgtctcct
ccaactaactacattgacaaaggcacagtagaaaaactaaaggcggccatgagtcggaga
tatgactccagtgctaagctgttggacctcagtaacctgtaccaggactccgaaatgtct
caggaaaatttacacctgcccctcagtcgacagaatgttatgacacaagtggtcacaatt
atagaagagaatattccagagttggagggaattgatgtcagcaataatcgactgatatca
ttggaacatctggcgaaattgacaaagatttgtccaaatattgtcagagtcaaccttggc
aagaatagtgtgcgctatctggatgaactggacaaaatcaaagattggaaagtcgtggag
ctggtgctggacgggaatgagctctgtgataagtttgaagaccaagctgcatatgttagt
gctgtacggaagaaatttccaaaggttatgaagttggatggacatgaccttccacccccg
ataacctttgaccttgagacaagtacagatttacctgtcactaaaggaagctttttcttg
aatacagagatccaggacattttggtgaaattcctaaaggagttttttacgatatatgac
tctgacaatcgtcagtcattaacagctgcctaccaggaagaggccatcttttccttgtca
gcttccaaaaataattctacagaccactggcaagcaggtttgcagatatactttcctgaa
agcagaaatttgctgcggaaatcacgagacccaagtcagaagcaacgagtattgatgcga
ggaaaactgaacgtcgtatctaagctgtgcctgctaccaaagactacacatgactacaac
tcgtttgtggtggatgttgaccatgcctctcaaaccctcctcagcttcacagtgacaggg
gtattcaaggaatctgaggaacgctctgatcgacagcctgtgagggcgttcagtcgacgg
tttatagccctccccagaggtcagggtatggtgatcgcgaatgacatgttgatggtgaca
aatgcttcccccagccaagcacaggccgccttcaagaaccccgccccgactccctcatcg
agtcctgtgcctgacacgactcctgctgccccctttcaccaggcagggcctagccttacc
cctgagcagcaacagatggtccagaccttttctgcacagtcacagatgaatttggatttt
tcagccaagtgtttggaggagcacaattggaattacgatggagccggccaagctttcctc
tcactacagaaagagaacaagattcctccagaagcgtttgtgaagtaa
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