Mizuhopecten yessoensis (Yesso scallop): 110464690
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Entry
110464690 CDS
T05079
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03440
Homologous recombination
myi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110464690
03460 Fanconi anemia pathway
110464690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myi03032
]
110464690
03400 DNA repair and recombination proteins [BR:
myi03400
]
110464690
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110464690
DNA replication proteins [BR:
myi03032
]
Eukaryotic type
DNA Topoisomerases
110464690
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110464690
FA (Fanconi anemia) pathway
110464690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
110464690
NCBI-ProteinID:
XP_021375710
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MVLLPIRRAFCTSSKEKMVRILNVAEKNDAAKSIAAVMSRGSARKREGFSKFNKIYEFEY
NILNHNNCTMTMTSVSGHLLGLDFIGNYKKWYSCNPVALFDVEVEKYCPQNFMDIKRTLE
REVKGAQSLIIWTDCDREGENIGFEVIQVCKNVKPNIPVYRARFSEITPQAIQRACRNLL
EPDKNTSDAVDVRMELDLRIGAAFTRFQTLRLQKIFPEVLSDQLISYGSCQFPTLGFVVE
RYKQVQAFVPEPFWKIKVTHKQEDSNIEFSWKRVRLFDNTACLVLYEHCTENPTATVKDI
KCKSKSKWRPQPLDTVELEKLASRKLRINAKETMKIAEKLYTGGNISYPRTETNKFPPDF
DLRRLVEQQTVDDEWGEFAGRVLEQGPRPRNGNKTDQAHPPIHPTKYCNNLQGNEKRIYD
FVVRHFLATCSSDAQGQETIVEIDIAEEKFSAQGLMITARNYLDVYPYDRWNAKVIPVYS
QGDTFQPNSIEMTESETSPPSLLSEADLIALMDKHGIGTDATHADHIETIKSRMYVGLQG
DNRFIPGHLGMGLVEGYDAMGYEMSKPNLRAELEADLSRICSGTKDKNVVLEEQKQKYKQ
VFIEACRQALKIDEALAKYLGEAQPMPAEHALETLASSPIKKCPNCGQDMMLKSKKDGKG
FYIGCMGYPNCRNAVWLPDFVLEATAEDSNCHNCDRVRLIKFKFKRGSVPPMVPTEYCGC
IGCDETLTEALNLNRNIGSSQRPVPSSNQTNLSDSGIGSTYHSQSQASGRTNSRPTQSTQ
PQRTQNTSMSNSTNQQNNTNNQRYSNTNNNTYNTQTGYGSQGGNSRAPLVPVMPFNTSGP
TADGGGNAIVCSCGEDALLLTVRKEGPNTGRQFYKCGSSKCNFFLWADETPNNEDGGGGG
GGGGGGGGGGYDSYNRTTNTSGRGNPPPQSGESGGEECNCGNLAKKLSVQKEGPNKGRQF
LSCNKPRGEGCNFFQWVDEAGMNENTRGGGATWKQGDSKKRAGSNSGGPTTKKARKCGLC
GEEGHTRKTCPHK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggtgctattaccgatacgcagggcattctgtacatcttccaaagagaaaatggtcagg
atattgaatgttgcagagaaaaatgatgccgcgaagtcaatcgctgctgtcatgtcaagg
ggaagtgctcgaaagagggaaggattttccaaattcaacaagatttatgaatttgagtac
aacattctgaatcacaacaattgcactatgaccatgacatcagtgtccggccatctttta
gggctggacttcataggcaattacaagaaatggtatagctgtaatcctgttgccctgttt
gatgtggaggtggagaagtactgtcctcaaaattttatggacatcaaaagaactctcgaa
agagaggtaaaaggagcacagtcccttatcatctggacagactgtgaccgtgaaggcgaa
aacattgggtttgaagtcattcaagtttgtaaaaatgtaaaaccgaacataccagtatac
cgagcaaggttttctgagatcactccacaagcaatccaaagagcctgtagaaacctactt
gaacctgacaagaacaccagtgatgctgtagatgtccgaatggagctggacctaagaata
ggggctgcatttacaagattccagacgttaagactacagaaaatattccctgaggttctg
tcagatcagctgatcagctacggcagctgtcagttccctacccttggttttgtggtggaa
agatacaaacaagttcaagcttttgtaccagagccattttggaagatcaaagtgacccac
aaacaggaagacagtaacatagaattcagctggaaaagggtgcgcctttttgacaacact
gcttgtctggttttatatgaacactgcactgagaatcctactgcaacagtgaaagatatc
aagtgtaaaagtaaaagcaagtggaggcctcagccgctggatactgtggaattggaaaag
cttgcttctagaaaattacgaataaatgctaaggaaacaatgaaaatagctgaaaaattg
tacactggagggaacattagctaccctcgaacagagaccaacaaattcccaccagacttt
gatcttaggagactagtggaacaacagaccgttgatgacgaatggggagagtttgcaggg
agagtgttagagcaagggccaaggccacggaatggcaataagacagatcaggcccatccc
cccatacatcctaccaagtattgtaacaacctacagggcaatgaaaaaagaatttacgat
tttgttgtgagacatttcctagcaacctgctccagtgatgcacagggtcaggaaaccatt
gtggaaatagacattgcagaggagaagttttcagctcagggcctaatgattactgccagg
aattacctagatgtgtatccttatgaccgctggaatgccaaggtgattccagtgtacagc
caaggagatactttccagcctaactccatagagatgactgaatcagaaacaagccctcca
tctttactctcagaggctgatttgattgctttgatggacaaacatggcattggaacagac
gctactcacgctgatcatatagagaccatcaaaagtcgcatgtatgttggactacaggga
gataacagattcatccctggtcatcttggaatgggacttgtggagggttatgatgctatg
ggatacgaaatgtccaaaccaaatctccgagctgaattagaggcagatttatcaaggatt
tgttctggcactaaagataaaaatgttgtattagaagagcagaaacagaaatacaaacaa
gtgttcattgaagcttgtcgacaggcgttgaagattgatgaagcactggccaagtatctg
ggagaggcccagcctatgcctgctgaacatgctttagaaacattagcctcttcacccata
aagaaatgtcccaactgtggtcaggatatgatgttgaaatcaaagaaagacggaaaaggc
ttctacattggctgtatgggttacccaaactgtagaaacgccgtctggctgcctgatttt
gtactggaagccactgctgaagacagcaattgtcataattgtgacagagtacgcctgatc
aagtttaagttcaaacgaggttctgtccctcctatggtgcctacagagtactgtggctgt
ataggatgtgatgaaaccctcactgaggccctgaatcttaacaggaacattggttcaagt
cagaggcctgttccatcttccaaccagacaaatctgtctgatagtggtataggttcaacg
taccactcccagtcccaggccagtggtagaacaaacagcaggccgacacagtctacccag
cctcagaggacacaaaatacctcaatgtccaacagtacaaaccaacagaacaacacaaat
aaccagaggtactccaatacaaataataacacctacaatacccagacaggatatggctcc
cagggaggtaactcccgtgctcccttggtgcctgtgatgccattcaacacatctggtcct
acagctgatggtggtggtaatgccattgtgtgttcctgtggggaggatgctctgttactg
actgttcgtaaagagggacccaatacaggtcggcaattctacaaatgtgggtcctctaaa
tgtaatttcttcctgtgggctgatgagacacctaacaatgaggatggaggaggaggaggc
ggaggtggaggagggggaggaggcggcggctacgactcatacaacagaaccaccaacact
tctggaaggggaaacccacctccacaatcaggagagtcaggaggcgaggaatgtaactgt
ggaaacctggctaaaaaattatcagtgcaaaaagaaggcccaaacaaagggaggcaattc
ctatcgtgcaataaaccccgtggtgaaggttgtaatttcttccaatgggttgatgaagca
ggaatgaatgaaaatacccgtggaggtggtgctacctggaaacaaggagactctaaaaaa
cgtgcggggtctaacagtgggggaccgacaaccaagaaggcgaggaaatgtgggttatgt
ggagaggaaggccacacaagaaagacatgtccacacaagtga
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