Mizuhopecten yessoensis (Yesso scallop): 110464761
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Entry
110464761 CDS
T05079
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myi04131
]
110464761
Membrane trafficking [BR:
myi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110464761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
WWE
X-Tfes_XVIPCD
Motif
Other DBs
NCBI-GeneID:
110464761
NCBI-ProteinID:
XP_021375807
LinkDB
All DBs
Position
Unknown
AA seq
2847 aa
AA seq
DB search
MLSKMQYTDILEMLEALERMTLRGVYRKYRPEIQVHKHAKQWWHFAMTSVLEENVRRRRR
MWSWDHISRHRKNMRDYREAYVKKLDSKKVASDVQKKIEECERVLDVLSLTLMRQHAEVE
AAKLGAKREKEKEEKGWFGGFFGGKKKKESKGSKDAGDMQEKFQELYTPDEKAKLYSAIG
YEEDESDPTLPKEFVAVKFVTKLSTLSFTLKDEARRDPQILRLQLKDVFSSFGQRPAASA
IQLEAKIDRFTVNGVQQNGQTPQMVLSQTEEADQVYSLLDVQVETNPLDGACDTRVRVNA
RPLQIVYDAITVNQLADFFKPPEDIRLQQINLQLSQAAVAKFEDLKEQSATGLQHAIDQR
KYTDIRIDVKSSYVIIPEGGFYKKNCKQLILDLGNLKVNSEKNQSSSGVKGQLDTVEEII
KRAYDKFNIEIDRTQLLFVNAGEDWQSVRTLAVSPLHVLEPISLSVCLQKCMFDKDSRMA
KMKVSGELKLLSLTISDARLQEIIQLVDSIPLPESAPPPDEDDIFKSATDIPVTDLNANQ
LSLADVAVVAVVDKKVDKDMERSTSQDLTNYTDLELKFEVKKVCVNLLQHTSVEDILVLK
LVVESIGTQLAIRTHDMSAEAYIGGVYLQYLKEKASETLVQKLEAAKATKRSISVVSGGP
LINLINTPSVDDHLVRLLTVNYVKANPDGPDFATTHKKTEQTVTVTFTALEVMLHQEALL
SLIVFAEGLQPPPRPQVEVKASTTSEKKEESAEKKDSQKSGSKKKGKEKDPDQIDIKVNA
ELNQIGVTICTKHNLITDMRVKGIDAKVTIQEEKTVVSAMLKAITIFDPDPDTLYQKIME
IQGEAVLTLDVTIYNHATEGAKYADMSCMDTSVNVTLGCIRLVFVNKFVNDLLVFVNNFQ
AAKDQAVFQAARERMVHAGQSVAEFSKDAVSKLQEKAPRVGLNINMQAPLIVIPLSSKSR
EVLLADFGELSIQNGFHLTGKVSSSGIPAVLDRMVIQLKQLKLTRDVFNVAGASRGECLI
LEPVTISLNVTRNLAISWYTDQPEVDITGSMEAIVATMSQGDFKMAMSLLEENLNEGQVK
TEDNDQSQTGIEQPSETSVTQESPSGTSSEGQVTQKVSEPTEVKVNYTKVKFNFQMKSLE
AALYTGESCLDSGTSSRDPVKCLGKVELKVIAVEGKVMLDGAIVTKVILKDTIVDDARPE
KQNGVTRMIERNAVKLSENTIGTGGGQGANMIDVSFTQESNQDKDIAVKVSSLYICVCVD
FLMALATFFQMPEAKNKPAVAAKEDKPKATPSKQVQQPPVAEMRITVTMEKPEIILIEDQ
SKPSSTALKMDTQLSFKMRMSTQRQEMSAILQDLQITSCIFNQRQNIGAQILHPCEISFY
SQAPFGKGAHMDLSTSDLILNISPATIRTISEVVATLSAKSGEAEKANTYKVPTDLWETK
KLEGKDFWYLTTDEPDSTVTDLVTMEDEDKREEQSNSELLIVKIPTIVVKLEGGVGNRTV
PLLILESSFSGEVKDWSGKLGVESTLKLEVAYYNEKLTVWEPLVEPILENSKLRRWELGL
EVTMNEDLPVIADDEVDGELDNIVLPPAKMSINIRSTDSLQLVVSKTCLEVLNNLGKSFG
EAYQLVEPTEKAGVIMSPYVIKNKTGIPMVMKLDNSFEMPEDASNMKVKLSPTRQLNLFT
KKKSVLIRKASVIKATQEGDEKKLIFQMEQYNATREVTIKRAEKRLYQINNRTSANEVWA
VVVCTDCHIGQRVVSLRSIVQAKNHLPQTVEVFYREGSRISSCGLVLAEETMDIPLHTIY
TETGEFFFKPVSETDEYRVSKESVGWRSAANLGTKQLSCEGQQGHSPFYMNVWAECEQIY
YEESDSLTAKSYTLHLCPTVILHNLLPFPIKFMLEGTDGYTTLDQGGNLPLTNAGVGKSN
LEIMIPNYMEKEWCGRNLLRVDIPDLSLWSFSAFIGAQKVDMDLGFHCKKSSGSMDLSLY
SPYWMINKTGQRMLYKGSDSEDVIEHHHDNEDVVLFSFKQKSFFSAKKKKNKHTVKSALA
EPAFVVSTTLTPEELQDYRMGMEWQEGKDHGKDKKVKEWRQSGKACLKIGDTEWSDKFSL
DVVGSSGTVQCKTKTRTFEVGVNIVLSQSGLTKLCTFTPYYMLLNTADHSLLIAESTSTQ
TWYEVKAKECQPFWPQLTGKEMKMRAKVKGSEVMTSEFLFNKANNTLARLDDQHGGINVD
CQVTESAMVTTFSSYKDGMASVQIVNHTDAASVTFHQSGSKNIHLLGPGHFMMYTWENLT
DKREIVWTCGDKKEVKNTLVEDGYDYFALSSDNNVYWVSFLDGMQRVLLFTEDLNLATLA
QQFWLTNRNNAGELERIEQEINVCIQGLGLSLINDLSQTEVAFLGITSSGVIWEEKKKRF
KALSMKNAHVLEEAYQKYLTEIELGHNPPPHLNLDNKMEVDFNEMRMFRPNNRGIRRSFQ
EGIWLQYKTSPHQIQLHAKINRLQLDNQMTGAVFPTVLSPVPLPKSVAADSVPKPFTEVS
VMLRKHEHDNMLQFKYFKVLIQEMQLKVDQGFLNNIIDLFSSSQDVSREQETALFLVDCE
KVKVKLMDEVGLSLADEQKNFYDYLHFSPIKIHLSFSLQGGGGDGKPTQIHANVINIFLQ
SVGVVLTDVQDVVFKLGYFQKEHCFYNQSQLLGQMTKHYAGQAIKQMYVLVLGLDVLGNP
FGLLRGVAEGIEDLFYEPYQGAIQGPEEFAEGLALGVRSLFGHAVGGAAGAVSRITGTLG
KGFAALTLDDDYQKKRREAMNKRPANVREGLARGGKGLVMGVFDGVTGIVRKPIEGAKNE
GVGGFFKGVGKGLLGVVTRPTSGVIDL
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atgctttccaaaatgcagtacacagacatcctggagatgctggaggctctagaaaggatg
actttacgaggtgtctacaggaaatacagacctgagatccaagtacacaaacatgccaaa
cagtggtggcattttgcgatgactagtgtactggaggagaatgttcgacgacggcgccgt
atgtggtcctgggaccatatcagcaggcatcgtaagaacatgcgagattatcgggaggcc
tacgtaaagaaactggacagcaaaaaagtagcgtcagatgtacagaagaaaatcgaggag
tgtgaacgggtgctggatgtcctcagtctgacgttaatgcgacagcatgcagaagtcgag
gctgctaaactgggtgcaaaaagagagaaggaaaaagaagagaaaggttggtttggaggg
tttttcggaggaaagaaaaagaaagaatccaagggcagcaaggacgcgggagacatgcag
gagaagttccaggagctgtacacaccagacgaaaaggctaaattatacagcgccatcggc
tacgaggaagatgagtcggatccaacactgccaaaggagtttgtggcagttaagtttgtg
accaaactaagcactctctcctttacactgaaagatgaggcaagaagagatccacaaatt
ctgcgattgcagttgaaagatgtcttttcatcatttggacagagacctgcagcttcagct
atacaactggaggctaaaattgaccgattcactgtaaatggcgtccagcagaatggtcag
acacctcagatggttttgtcacagacagaggaagctgaccaggtgtattctcttctcgac
gtccaggtcgaaactaatccactagatggcgcttgtgacacgagagttcgggtcaacgct
cgaccgttacaaattgtgtacgatgctatcactgtgaaccagttggctgatttcttcaaa
cctccagaggatatccggctacaacagataaacctccagttatcacaggcagctgttgct
aaatttgaagatttaaaagaacagtcagcaacaggacttcagcacgccatagaccagcgc
aagtacactgacatcaggattgatgtgaagtcgtcttatgttatcatacccgaaggaggc
ttctacaaaaagaattgtaagcagctgatccttgaccttggtaacctgaaggtcaacagt
gaaaagaaccaatcatcttctggtgtcaagggtcagctggacaccgtggaggagatcatt
aagcgagcctatgataaattcaacatcgaaattgacagaacacaacttctctttgtcaat
gcaggagaggactggcagtctgtgcggacactggccgtgtctccgttacacgttcttgag
cccatatctctgtcggtgtgcctacagaagtgtatgtttgacaaggactcccgtatggcc
aagatgaaggtgtctggggagttaaaactgctgagcctgacaatatcagatgcccgacta
caggagatcatacaacttgtagacagtatacccctacctgagtcagctcccccaccagac
gaggatgacatcttcaagagtgctactgacatccctgtgacagatctaaacgctaaccag
ctaagtctggctgatgtggctgtggtggctgtggtcgacaaaaaggtggacaaggacatg
gaaaggtcaacctcacaggatctcactaactacactgaccttgaacttaagtttgaggtg
aagaaggtgtgtgtaaacttactgcagcacacaagtgtcgaggacatacttgtgctgaaa
ctggttgttgagtccattgggacacagctggcgattcgtacacatgacatgagtgcggag
gcttacattggcggcgtctacctacaatatctcaaggagaaagcctccgaaacattggtt
caaaagctagaagcagcaaaagctacaaaacgctctatatcagtggtcagtgggggtcct
ctgataaaccttatcaacactccatcggttgatgaccacctggtccgactgctgaccgtt
aactatgtcaaggctaatcctgacggtcctgacttcgccaccacacacaagaaaactgaa
cagactgtgacagttaccttcactgcgttagaggtcatgctccaccaggaggcgctgctg
tctctcattgtatttgccgagggcctacagccgccaccacgacctcaagttgaggtcaag
gctagtacgaccagtgagaaaaaagaagaatcggcggagaaaaaagacagtcagaaatct
ggatcaaagaagaaagggaaggagaaggatcctgaccagatcgatataaaagtaaatgct
gagctgaaccagatcggggtgaccatctgtacgaaacacaacctcattacagacatgcga
gtcaaaggaattgatgccaaggtcacgattcaggaagagaaaacagtagtgtcggccatg
ttgaaggccatcacgatctttgacccggacccagacacactgtaccaaaagattatggag
atccagggtgaggctgtgttgacccttgatgttactatatataaccatgccactgaggga
gctaagtatgcagacatgtcatgcatggacaccagtgtcaacgtcacgcttggctgcatt
cgacttgttttcgtcaacaaatttgtcaacgacttactggtatttgtgaacaacttccag
gctgcgaaggatcaggccgttttccaggctgctagggagcggatggtccacgctggacag
tctgtggcagaattctctaaagacgcagtcagcaaactccaggagaaggccccacgtgtc
ggtctaaacatcaacatgcaggcacctctcattgtcattccattgagttcaaagtctcga
gaagtcttgctagcagattttggtgaactcagtattcaaaatggcttccacctgacagga
aaggtgtccagcagtggtatcccagctgtgttagatcgaatggtcatccagctgaaacag
ttaaaactcacaagggacgtgttcaacgtggccggggccagtcgcggtgagtgtctgatc
ctagagccggtcaccatctctcttaatgtaaccaggaatctggccatatcctggtacact
gaccagcccgaggtggacatcacagggtcaatggaggccattgtggcgaccatgagccag
ggagatttcaaaatggccatgtcacttctggaagagaatttgaatgaaggtcaggttaaa
acagaggacaatgatcaaagtcagacagggattgaacaaccaagtgaaacttctgtaaca
caggagtcaccctcgggaacatcatctgaaggtcaggttacccaaaaggtcagcgaacca
acagaggtcaaggtcaactacacaaaggttaagttcaacttccagatgaagagtttggag
gcagccttatacacaggagagagttgtctggattctggtaccagtagcagagatccggtc
aaatgcctgggtaaggttgaactcaaggtcatagctgttgaaggcaaggtcatgctggat
ggtgccatagttaccaaggtcattctcaaggacacaatagtagatgatgccagaccagag
aaacagaacggagtcacaaggatgatagagagaaatgctgttaaactgtcagagaacaca
ataggtacaggtggtggccagggagccaacatgattgacgtcagttttacacaggagagt
aaccaagacaaggacatcgcggtgaaggtaagcagtctgtatatatgtgtgtgcgtggac
ttcctgatggcgttagcgaccttcttccaaatgccagaggcgaaaaataagccagcagtg
gcagccaaggaggataaaccaaaagccacaccatctaaacaagtacagcagcctccagtg
gcagagatgaggattaccgttaccatggagaaacccgagatcattctgatagaggaccaa
tcaaaacctagtagtactgctctcaaaatggatactcaactgtccttcaagatgcggatg
tcaacccagcggcaagaaatgtcggccatcctccaagaccttcagattacgtcgtgtata
ttcaaccaacgccaaaacatcggggcccagatcttgcatccgtgtgagatctcattctac
agccaagccccttttggtaaaggtgcccacatggacttatctacgtcagacctgatcctt
aacatctccccggcaaccatacgaaccatctccgaagtggtggccacactctctgccaag
tctggagaggctgagaaagccaacacctacaaagtaccgaccgacctctgggaaactaag
aagctggagggtaaggacttctggtacctgacaacagatgaacccgattcgacagttaca
gatctcgtcaccatggaagacgaagacaagagggaggaacagtcaaactcagaattgctg
attgttaagatcccgaccattgtagtgaagcttgagggaggggtaggaaacaggacggtc
cccctcctcatccttgagtcctccttctccggtgaggtcaaggactggagtggtaagttg
ggtgtagagagtaccctgaagctagaagtcgcctactacaacgaaaagctgaccgtgtgg
gaaccgctggtggagcccattctggagaatagtaaactcaggaggtgggaactgggacta
gaggtaacaatgaacgaggatctgcctgtgatagctgatgatgaagttgatggggagttg
gacaacattgtcctgcctcctgcaaagatgtccatcaacattagatcaactgattccctg
cagctggtcgtgtctaaaacatgtctggaggtgttaaacaacctgggcaagtcgtttggt
gaagcgtaccagctggtggagccgacagagaaggctggagttatcatgtctccttacgtc
atcaaaaacaaaactggcatcccaatggtcatgaagctggacaactcctttgagatgcca
gaggatgcgtccaatatgaaggttaaattgtctccaactcgccagctcaacttatttaca
aagaagaagagtgtattgattagaaaggcttctgtaatcaaggccacacaggagggtgac
gagaaaaaactcatcttccagatggagcagtacaatgccacaagggaggtaaccattaaa
cgtgcagagaagcgactctaccagatcaacaacaggaccagtgctaacgaggtgtgggcc
gtcgtagtgtgtaccgactgccacattggtcagagagttgtctcccttagatccattgta
caggctaagaaccacttgcctcagacagttgaggtgttttaccgtgaaggctccaggatt
tcatcgtgtggtttggtactggctgaggagacgatggacattccactccacacaatatac
acagaaacaggagagttcttcttcaaacccgtgtcagaaactgacgagtaccgggtgtcc
aaggagtctgtgggatggcggtcagcggccaatcttggtactaaacagctgagctgtgag
ggacagcagggtcacagccctttctacatgaatgtgtgggcagagtgtgaacagatttac
tacgaggaaagtgactccttgacggccaaatcctacaccctacacttgtgtccgaccgtt
atactacacaatctgctgcccttccctatcaaatttatgttggaggggactgatggctat
acaaccctcgaccagggaggcaacctaccactgaccaacgctggagtgggcaagtccaac
ctagaaatcatgattcctaactacatggagaaggagtggtgtggccgtaacttattgagg
gtggacatacccgacctttctctgtggtccttcagcgccttcataggggctcagaaagtg
gatatggacctcgggttccactgtaagaagagctcgggcagtatggatttgtcactgtac
agcccctactggatgatcaacaagacaggccagcgcatgctctacaagggtagtgattct
gaggacgtgatagaacatcaccatgacaacgaagatgtagtcctattttcattcaagcag
aagtcatttttctcagcaaagaaaaagaaaaataagcatacagtaaaatcggctctggcc
gagccagcgtttgttgttagtacaacacttactccagaggagcttcaggattataggatg
gggatggagtggcaggaaggaaaagatcatgggaaagacaaaaaggtgaaggagtggaga
caaagtgggaaagcctgtttgaagataggtgatacagagtggtctgacaaattttctctg
gatgtcgtaggaagttctggaactgtccaatgtaagaccaaaacgagaacatttgaggtt
ggtgttaacattgtcctgtcacagagcggtctcaccaaactctgtacatttactccgtac
tacatgctacttaacactgccgatcattccctgctgatagctgagtctacatccacacag
acctggtacgaggtcaaagctaaagagtgtcagccattttggccacagctgactgggaaa
gaaatgaagatgagagcgaaggtcaaagggtcagaggtcatgacctctgaattcctgttc
aacaaagccaacaacactctggccagactggatgaccagcacggtggtatcaacgtagat
tgtcaggtgaccgagtctgccatggtaaccacgtttagctcctacaaggacggcatggcc
tccgtacagattgtcaaccacacggacgcagcctccgtcacattccatcagagcggctct
aagaacatccacttgctcgggcccggtcacttcatgatgtacacctgggaaaacctgacc
gacaaacgagagattgtctggacatgtggtgataaaaaggaggtgaaaaacacacttgtt
gaggatggttatgactattttgccctgtcctctgacaacaatgtctactgggtgtccttc
ctagacggcatgcagcgagtcttattgttcaccgaggacctcaatctcgccacccttgct
cagcagttttggttaacaaacagaaacaatgctggagagctggagagaatagagcaggaa
atcaacgtctgtatccaaggcctggggctgtcccttatcaacgacctcagtcagaccgag
gtcgccttcctcgggattacaagctccggcgttatatgggaggaaaagaagaaaaggttt
aaggctctgagtatgaagaacgcacacgtcctggaagaggcgtatcagaaatacctgact
gagattgaacttgggcataacccacctccacacctcaaccttgataacaagatggaggtt
gacttcaatgagatgaggatgttccgtccaaacaatcgtgggatccgacggagtttccag
gaggggatctggctccagtacaaaacctcacctcaccagatccagcttcacgctaaaatc
aacagactccagcttgacaaccagatgaccggagctgtgttcccgaccgtcctgtcaccg
gtacctttacccaagtctgtggccgcagacagtgtaccgaagcctttcacagaagtcagt
gtcatgttaagaaaacacgaacatgacaacatgctacaatttaaatattttaaagtcctc
atccaggagatgcaactgaaggttgaccagggattccttaacaacatcattgatctgttc
tcctccagccaggacgtctctcgggaacaggagactgcccttttcctggtggattgtgaa
aaggtcaaggtcaagttgatggacgaagttggcctgtctttggctgatgagcagaagaac
ttctacgactatcttcacttctcaccaattaagatccacttgagtttctccctgcaagga
gggggcggggacggcaaaccgacacagatccacgccaatgtcatcaatattttcctccag
agtgttggcgtcgtactcaccgatgtacaggatgttgtcttcaaactcggctacttccag
aaggagcactgtttctacaaccaatcacagctattgggccagatgaccaaacactatgca
ggccaggccattaaacagatgtatgtgctggtgctgggactcgacgtgttgggaaatccg
tttggacttctgcgtggggtggcagagggtatagaagatctgttctacgaaccataccag
ggagctatccagggtccggaggagtttgcggaaggtcttgcccttggagtgaggagcttg
tttggacatgctgttggtggagctgctggtgccgtgtccaggataacgggaactctggga
aagggtttcgctgccttgaccttggatgatgactaccagaagaagagacgagaagccatg
aacaaacgtccggcaaacgtgagggaaggtttagctcgaggaggcaagggcctcgtcatg
ggcgtgtttgatggtgtgacaggcattgtaaggaagccgatagaaggagccaagaacgaa
ggagtcgggggattctttaaaggtgtggggaagggactgttgggcgtggtcacaaggccc
accagtggagtaattgacttataa
DBGET
integrated database retrieval system
