Mizuhopecten yessoensis (Yesso scallop): 110464905
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Entry
110464905 CDS
T05079
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
myi01009
]
110464905
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110464905
Protein phosphatases and associated proteins [BR:
myi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110464905
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110464905
mRNA cycle factors
Stress granule specific factors
110464905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
110464905
NCBI-ProteinID:
XP_021376047
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSSYPVQNQPSMVQQNHRNKAGMMGSGILPNNSNNNNNNNSMPSPLMSVNNSYHTQTQSL
VGGLQQKVLIPGTIATNQNQPPASSLTNQSPPNPINMAGGVAVGSQIATPPGDQQPTTVS
IQSLEESENNTQETMLANTKEKTPMCLINELARYNKIAHQYTLIDEQGPAHKKTFYVQLK
LGDKEEYKQSGASIKKAQHAAAAEALENTTYTHPPPKPPKVVLQRDVDMTTPTVELNALA
MKRGEQTMYRPLDNRHQNYYPPPNYNYRGMYQQRYHYPRAPRVFQVCLKVGPRDFVGEGP
TRQDARHDAATKALAMLSKLPVPSEQDQKAEAVITPTEDGDDIDKLKSEISLVHEIALKR
NLKVSFDVIRESGPPHMKTFVTRCSVGEFETEAEGNSKKMSKKKVAEMMLEKLRELPPLP
VSAMKPRNKPNNKKKSKNIIKVSQVQKANPDYGVGINPISRLIHFQQAQQKKEPVYTLVT
ERGLPRRREFVIQVQVDDQTCTGVGPNKKLAKRHAAEAMLTLLGYNKPSPQPTKPAIKTA
TTPEGMSGEKKVTFVENNEDSVGDMNGKASVGRQLVPGLLLLPDSKYTGSSLYNPALSGM
GDSLGFGPSPRLRLGEIASRYDVDIKFDEFAGTTNNTEVLSRVTLMTNPPRIFHGSGPSP
EAARDTASLEALAFLANIGKDDMTAGGDGAKIKKEPGELANSTNLGSTHTGRVPPM
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatatcctgttcaaaaccagccgtccatggtacaacaaaaccatcgtaacaaa
gctggaatgatggggagtggtattttaccgaacaattccaacaacaacaacaacaacaac
tctatgccaagtcctctgatgtccgtcaacaacagctatcatacacaaacgcaatctctt
gttggcggtctacaacagaaggtcttaatccctggtacaatagccaccaatcagaaccag
ccacctgcctcttcactgaccaatcagagccctcctaatcctattaacatggctggaggt
gttgctgttggttcccagattgcaacgccacctggtgaccagcagccgactactgtcagc
atccaatctttagaagagagcgagaacaatacccaagaaaccatgttggcaaacacaaaa
gagaaaaccccaatgtgtctgatcaatgagttagctcgttacaacaagatagcacatcag
tacacgctgatagatgagcagggccccgcccacaagaagaccttctatgtccagctgaag
ctcggggacaaggaggagtacaaacaatcaggggccagtatcaagaaggctcagcacgct
gcagcagccgaggcattggagaataccacctacacacacccaccacccaagcccccaaag
gttgtcctacagagggacgtggatatgaccacacctaccgtggaactgaatgccttagct
atgaagcgtggggaacagacaatgtaccgccccctagacaacagacatcagaactactac
cctccccccaactacaactaccgaggcatgtaccaacagaggtatcactatcctagagcc
cctcgggtgttccaagtgtgtctgaaggtagggccacgagactttgtcggtgagggcccc
acgcgacaggatgctcgacatgatgccgcaaccaaggctctggccatgctaagtaagttg
ccagtgcccagcgaacaagaccagaaggctgaggcagtgataacgcccacagaggacggc
gacgacatagacaaactgaagtctgagatcagcctagtccacgagattgcactcaagcgg
aatttgaaagtcagctttgatgttatacgtgaatctggtccgccccacatgaagacgttt
gtgacacgatgttctgtgggagagtttgaaactgaggctgagggcaacagtaaaaagatg
tctaaaaagaaagttgctgagatgatgctggagaaactacgagaacttcctcctctgcct
gtgtctgccatgaagccaagaaataaaccaaacaacaagaaaaagtccaagaatatcatc
aaagttagtcaagtacagaaggctaacccagactacggcgtgggaattaaccccatcagt
cgcctcatccacttccagcaggcacagcagaagaaggagccagtgtacactcttgtcaca
gagaggggactgccaaggcgccgcgaattcgtcatccaggtacaggttgacgatcagacg
tgtacaggtgtgggtccgaacaaaaaacttgccaaaagacatgctgccgaggccatgctg
actctcttgggctacaacaagccctcgcctcaacccaccaagccagccatcaaaactgcc
accaccccagagggtatgtccggggaaaagaaggtgacatttgtggagaacaatgaagat
tcagtgggtgacatgaatggtaaggcttctgtcggtcgacaacttgttcctggactcctc
ctcttaccagactccaagtatacagggagctcgctgtataacccagctctgtcaggaatg
ggggacagccttgggttcggaccaagtccacgcctgcgtctcggagagattgcctccaga
tatgacgtggacatcaaatttgatgaatttgctggcactactaacaacacggaggtgctg
agcagggtgacactgatgaccaacccaccccgtatcttccacggcagtggcccctcccct
gaggcagctcgtgacacagcctctcttgaggccctcgccttcctggctaacattggcaag
gacgacatgacagctggtggggatggcgcaaagataaagaaagaaccaggagaactagct
aactcaacaaacctagggagcacccatacagggagggttccccctatgtag
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