Mizuhopecten yessoensis (Yesso scallop): 110465410
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Entry
110465410 CDS
T05079
Name
(RefSeq) cleavage stimulation factor subunit 2-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110465410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110465410
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110465410
U7-dependent histone pre-mRNA processing factors
110465410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_occluded
DUF8400
RRM_7
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
110465410
NCBI-ProteinID:
XP_021376876
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MATQLMPNPPLTAAERACRSVFVGNIPYEATEEQLREIFTQAGPVVSFRLVYDRETGKPK
GYGFCEYQDVETAQSAMRNLNNYDFNGRPLRVGVAAGEQNRDEMKGMQQAMGGPLLESPF
GDPTEPEKAPEAISKAVASLPPEQMFELMKQMKMCIQNNPTEARNLLLQNPQLAYALLQA
QIVMKIVDPQVAMAMLHRDTNQIPPSNVPPSSQPISLPPQLRMPNTSVPQGPPNSMGGPM
PMGSNIMAPGPHGPGGPGPHGPGGPGSHGPGGPGPHGPGGPGPHPGGPHGPGGPGPRGPG
VPGNRGPGGPGPHGPGGPGPGGPRMGGPEMMGRPQGPLMGPGGPQPNMGGPQPNMGGPPM
RPDMGGPPQSRPEQRDPRMGDGRGMPPRPGPQGGAPVGIPGLPNLSLGGLQLPGGMPNMS
AGASISAQDQEKAALIMQVLQLTDQQIAMLPPDQRQSILILKDQIAKSANP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcaactcatgcccaatccgccgctaactgcagcagaaagagcttgtcgatca
gtatttgttggaaacattccatatgaagccacagaagaacagttacgagaaatattcacc
caagctggacctgtagtaagcttcaggcttgtgtatgacagagaaacagggaaacccaag
ggatatggcttctgtgagtaccaggatgtggagacggcacagagtgccatgcgaaacctc
aacaattatgatttcaatggccgccccttgcgtgtgggcgtggctgctggggaacagaac
agggatgaaatgaaaggcatgcagcaggccatggggggtcctctgctagagagtccgttt
ggagatcctacagagccagagaaagccccagaggccatctccaaggctgtagctagttta
cccccagaacagatgtttgagctgatgaaacagatgaagatgtgtattcagaacaatcca
acagaggcaaggaacctgcttttacagaatcctcagctggcctacgctctcctgcaagct
cagattgtcatgaaaattgtagacccccaggttgccatggctatgttacacagagacacc
aaccagatcccaccgtcaaatgtacctccttcctcacagcccatcagcctgccaccacag
ctcaggatgccaaatacatcagtgccccagggcccacctaactctatgggaggacccatg
cctatgggcagcaacatcatggctccaggtccacatggcccaggtggaccaggaccacat
gggcctggaggtcccggttctcacggccctggaggaccaggtccacatggcccaggaggt
ccaggtccacatccaggcggtccacatggtccagggggtcccggacctcgtggccctgga
gttcctggcaatcgtggtcctggtggccctggtcctcatggcccaggtggaccagggcca
ggagggccaagaatgggtggaccagaaatgatgggcagacctcagggaccattgatgggt
ccaggtggtcctcagccaaacatgggtggaccacagccaaacatgggaggaccccccatg
aggccagacatgggtggtccccctcagtctcgtcccgaacagagggaccccaggatgggg
gatgggcgtggtatgcctccgaggcctggtccccagggtggagctccagttggtattcca
ggactaccaaacttgtctttgggtggcttacagttaccaggaggtatgccaaatatgtct
gctggagcttcaatctcggcacaagaccaagagaaggctgccctgatcatgcaggtgtta
cagctaacagaccagcagatagccatgttaccccccgaccagcggcagagtattctcatc
ctcaaggaccaaatagcgaagagtgcaaacccatag
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