Mizuhopecten yessoensis (Yesso scallop): 110465694
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Entry
110465694 CDS
T05079
Name
(RefSeq) ATP-dependent RNA helicase HAS1-like isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myi03041
]
110465694
03009 Ribosome biogenesis [BR:
myi03009
]
110465694
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110465694
Spliceosome [BR:
myi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110465694
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
90S particles
Helicases
110465694
Pre-60S particles
110465694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
DUF4681
BUD22
Motif
Other DBs
NCBI-GeneID:
110465694
NCBI-ProteinID:
XP_021377359
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MASEVKKLNMLKKKQKMKTKKLKTPQVLTAAVEEEDPVDSDMEDIESAEDIPQVQQKLQK
KKKKMKVINGMDHSKAVSSADSRTTSTAMTDETTKTKKKKKRKLEETGEIPAKKSKQDLK
EHESEENKDASSDDDDAENIEDDCEDIVDDSDENDGDEEPEEVSNDIESKLPGSGLGAGI
LSDSSFKSLEGKVSEQTMKGIEDMGFTHMTEIQAQSIPHLLEGRDLMGAAKTGSGKTLAF
LIPAVELLNKLRFQPRNGTGCIIISPTRELCMQSFGVVKELLKHHFHTYGLIMGGTNRAE
EAKKLSRGVNMVVATPGRLLDHLQNTPNFMYKNLQCLIIDEADRILDIGFEEEMKQIIKL
LPKKRQTMLFSATQTRKIEDLAKVSLKKEPLYVGVDDSKEKATVEGLEQGYVVCPSDKRF
LLLFTFLKKNRKKKIMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQQKRTQTFFQFCN
ATEAILLCTDVAARGLDIPRVDWIVQFDPPDDPKEYIHRVGRTARGDGGIGHALLILRPE
ELGFLRYLKHAKVPLNEFEFAWSKISNIQPQLEKLIEKNYFLNKSAKEAYKAYVRAFASH
SLKNIYDVNGLDLLKTALSFGFKVPPFVDLEVYGSKSRKVQKRGGGGGGAGAGGFGYQKP
QKHNSKKFVYKQFKKK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaagtgaagaagttgaatatgctgaaaaagaaacagaaaatgaaaactaaa
aagttaaaaacaccacaagtgttgacagctgctgtcgaggaggaagatccagttgatagc
gacatggaagacatagaatctgcagaggacatccctcaggttcagcaaaaactgcaaaag
aaaaagaagaaaatgaaagttataaatggaatggaccactcaaaagctgtatcatcagca
gacagcagaacaacatccacagcaatgacagatgaaacaacaaagacaaagaagaaaaag
aaacggaaattagaagaaacaggcgaaattcctgctaagaaaagtaaacaggatttgaaa
gaacatgaaagtgaagaaaataaagacgcttcaagtgatgacgatgatgctgaaaatata
gaagacgattgtgaggatattgtagatgattcagatgagaatgatggtgatgaggaacct
gaagaagtcagcaatgatattgaatccaaattgcctggatcaggtttaggagctggtatc
ctgtcagattcatcattcaaatctctcgagggcaaagtgtctgagcagaccatgaaagga
atagaagatatgggttttactcatatgacagaaatacaggctcagtccataccccacctc
ctggagggcagagatctgatgggagcagcaaagactggcagtggcaaaacgttagcattt
cttatcccagccgtggaacttctcaacaagcttcgcttccaacccagaaatggtacaggg
tgtataattatctcccctacacgtgagctgtgtatgcagagctttggtgtggtgaaagaa
ctgctgaagcaccacttccatacatatggcctcatcatgggagggaccaatagggcagag
gaagctaagaagctgtcacggggtgtgaacatggttgtagccacacctggacgactcctt
gatcacttacagaacacaccaaacttcatgtacaagaacctacagtgtctcataattgat
gaagcggacagaattttagatattggttttgaagaagaaatgaaacagatcatcaaactt
ttaccaaagaaaagacagaccatgctgttctcagcgactcaaacacggaagattgaagac
ctggcaaaagtctccctgaagaaggaaccattgtatgtgggtgtagatgatagtaaagag
aaggctacagtggaagggctggagcagggatatgtagtgtgcccatcagacaaaaggttt
ttactgctgtttacctttctgaaaaaaaaccgaaagaagaaaatcatggtgttttttagc
tcctgtatgtccgtcaaatttcatcacgaacttctcaactatatagacctacctgtgatg
tgtattcatggtaaacagaaacaacagaagcggacacagaccttcttccagttctgtaac
gccacggaggccatcttgttatgtactgatgtggctgcccgaggactagacattcctcgt
gtggactggattgtccagtttgatcctccagatgatccaaaggaatacatccacagggtt
ggacggacagctcgtggggatggggggatcggccatgcccttctcatcctgcgaccagaa
gaacttggcttcctgcgctatctcaaacatgccaaggtaccactgaatgagtttgagttt
gcctggagcaaaatctccaacatacagccacagttggagaagctgattgagaaaaactac
ttccttaacaagtcagcaaaggaggcctacaaagcctatgtgagggcctttgcctctcac
agtttgaagaacatctacgatgtcaacggtcttgacttgctcaagacagcgttatccttc
ggcttcaaggtgccaccttttgtggacttggaagtctatggcagcaagagtagaaaggtc
cagaagcgaggaggaggaggaggaggagcaggagcgggaggctttggctaccaaaaacca
cagaaacacaacagcaaaaaatttgtgtacaaacaattcaagaagaaatag
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