Mizuhopecten yessoensis (Yesso scallop): 110466470
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Entry
110466470 CDS
T05079
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myi03016
]
110466470
Enzymes [BR:
myi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110466470
Transfer RNA biogenesis [BR:
myi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110466470
Prokaryotic type
110466470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
110466470
NCBI-ProteinID:
XP_021378654
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MLIKQVHLIRLIADCSKLLIRRYPRSKMSTTTATSGCGADTKVEKTLQGSEVKSEGIQET
TGEKRKLEGEEVTTSVKKEKTDQAPVTETETAPLKRRKVALFMSYSGKGYFGLQRQKDFP
TIEGALGKALLSVGVISKQDEEMPQKMEFQRAARTDKGVSAAGNLISLKMSMHLENFLEE
INKVLPQQIKIQACIRVTKAFNSKNYCDGRTYSYLTPTLVFAPHTQAVTEKYRVQDETLE
QVREIIKRFEGTHNFHNFTSGLKPTEAKAKRYIINFKCGEPFVQDDMEFVQLTVRGQSFM
LHHIRKMIGLTIAIVRGCCGEEVIEKSYSVVKVDIPKAPGNGLMLEELHYHHYNRRYGTD
GIHEALDWTIYKEAIDKFKEEHIYPEMIRSEKVDQSMVTWLATLDHHEYDEIPPEKLLNW
KFKESDENNKKGKSTSSSEKPDCTGETTSDNTSSSTENGKEDVLDQAKTKNAVDSPDNRS
VESKNMMVSSAEDVPSSCNKDKDVPTSCNKDTDKSADEAVNDKETVNKMEVS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgctgattaagcaggtacatttgatccgcttgattgctgattgctccaaactactgatc
aggagatacccgagatccaagatgtcaacaactacagcaacaagtgggtgtggtgctgat
acaaaggtagagaaaacattgcaagggtccgaagtcaagtcagagggcatacaggaaacc
acaggcgagaaacgcaaattggaaggagaggaggtgacgacttcagtgaagaaagaaaag
acagaccaagcacctgtgactgaaacagaaacagcccctctgaagaggagaaaggtggca
cttttcatgtcttatagtgggaaaggatattttggtcttcagagacagaaggattttcct
acaatagaaggagccctgggaaaggcactgctcagtgtgggtgtgatatctaaacaagat
gaggagatgccacaaaagatggagttccagcgggctgccaggaccgacaaaggagtgtct
gcagcaggaaacctcatctccctaaagatgtctatgcatttggaaaacttcttagaagaa
atcaacaaagttttacctcaacagatcaagattcaggcttgtattagggtaaccaaggca
tttaacagtaaaaattactgtgacggaaggacatatagttacctgactccaacgctagtt
tttgctcctcatacacaggcagttacagaaaaatatagagttcaagatgaaaccctcgaa
caagttcgagaaattataaagagatttgagggaactcataactttcacaacttcacatca
ggattgaagccaacagaggccaaagctaaacgatacatcatcaattttaagtgtggtgag
ccgtttgtacaagatgacatggagtttgtacagcttacagttcgtggacagagcttcatg
cttcatcacatccgcaaaatgatcggtttaacaattgccattgtgaggggttgctgtggt
gaggaggtgatagagaagagttattctgtcgtcaaggtggatattcccaaagctcctgga
aatggtctcatgttggaggagctgcattaccatcattataataggagatatggaacggat
ggcatacacgaagctctggactggactatctacaaagaagcaatagacaagtttaaagag
gaacacatctacccagaaatgattagatccgaaaaagtggaccaatccatggtgacatgg
ctagctacattagatcaccatgaatatgatgaaatacctccagaaaaattgttaaactgg
aaattcaaagagagtgatgaaaacaataaaaaaggaaaatctacttcgagttctgaaaaa
ccagactgtacaggagagacaacatcagataacacatcctcttctactgaaaacggaaag
gaagatgtattggaccaagctaaaaccaagaatgcagtggacagtccagataaccgatct
gtagagtctaagaacatgatggtgagctctgcggaggacgttccgtcttcttgtaacaag
gacaaggacgttccgacttcctgtaataaggacacggacaaatcagctgatgaagctgtg
aatgacaaggaaacagttaacaaaatggaggtgtcatga
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