KEGG   Mizuhopecten yessoensis (Yesso scallop): 110466495
Entry
110466495         CDS       T05079                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110466495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:myi04121]
    110466495
Enzymes [BR:myi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110466495
Ubiquitin system [BR:myi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110466495
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110466495
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 zf-C3HC4_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st zf-C3HC4 zf-RING_2 Beta-prop_EML zf-RING_UBOX Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 zf-C3HC4_3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_WDR75_1st Beta-prop_DCAF4 WD40_RFWD3 zf-RING_5 Beta-prop_HPS5 zf-C3HC4_4 Beta-prop_IFT122_1st RING_XB3-XBAT31 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 zf-rbx1 zf-RING_10 RMC1_N Beta-prop_IFT140_1st Beta-prop_WDR11_2nd bZIP_1 Sina_RING TRAF3_RING
Other DBs
NCBI-GeneID: 110466495
NCBI-ProteinID: XP_021378699
LinkDB
Position
Unknown
AA seq 618 aa
MAARTPQTGRRRKRQQPPVYSGISGSYEDKDNDYVCPICFDLIEEAHMTKCGHTFCYKCI
KQSLEQSNRCPKCNFVIDSIQQLFPNFTVNELVLKHRGRLDEKKMKMDQQNSPGVGSDLC
ELVTEDNLDLPHVNQLLSLLHHKKQLLEADGTLAQNLILKEFLQQIRLKKQEHIDQLTRE
LAVIDEDTKKVEMMISEHRRKYPFTPDHLVPNGFDPSIASDSDMGSQEGFNGSKNAGKWL
NTTMAARKKKVSQHFDDLEQCYFSVRQREILTGGENEEGLGEFTESLSKFTRFSSFRPLA
TLSYASDFYSGSSIVSSIEFDRDCDYFAIAGVTKRIKVFEYCNVIKDVVDIHYPVNEMVC
NSKISCVTWSAYHKNMLASSDYEGTITLWDAFSGQKSKIFQEHEKRCWSVDFNRMDPKLL
ASGSDDAKVKLWSTNADHSIACLEAKANVCCVKFNPDSRYHLAFGSADHCVHYYDLRNTK
QAVMVFKGHRKAVSYTKFLNTKEIVSASTDSQLKLWNIKKPTNLQTFKGHINEKNFVGLA
TDGDYVACGSENNSLYVYYKGLSKQLLTFKFDTVRSALEKDKKEEEINEFVSAVAWRPGS
NVIVAANSQGTVKVLELV
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggctgcaagaacaccacaaaccggtcggagaagaaaacgacaacaaccacctgtttac
agtggaataagcggatcatacgaagacaaagacaatgactacgtttgtccaatttgtttt
gacctgatagaagaagctcatatgacaaaatgtgggcacacattctgctacaagtgtata
aaacagagcctggagcagagtaacagatgtccaaagtgtaactttgtcatcgacagcatc
cagcagctctttcctaacttcactgtaaatgaactggtgctgaaacacagggggaggctg
gatgaaaagaagatgaaaatggaccaacagaattctccgggagttggctctgacctctgt
gagcttgtgacagaggacaaccttgaccttccccatgtcaatcagctgctgtccttacta
caccacaaaaaacagttgttagaggcggatggcactttggcacaaaaccttatattgaaa
gaatttttacaacaaatccgtttaaagaaacaagagcatatagaccaattaacgagagaa
cttgctgttattgatgaagacaccaaaaaagtagagatgatgatctcagaacacagaagg
aaatatccctttacaccagaccatttggtgcccaacgggtttgatccctccatagcctcg
gactctgacatgggcagtcaggaaggcttcaatggcagcaaaaatgctggcaagtggtta
aatacgacgatggcagctaggaagaagaaggtcagccaacactttgatgacctggagcag
tgttacttctctgtaagacagagggaaatactaactggaggggaaaatgaagaaggactt
ggagagtttacggaaagtctttcaaagttcaccagatttagttcctttaggcccctagcc
acactcagctacgccagtgacttctacagtggctccagtatagtatccagcattgagttt
gacagagactgtgattattttgctatagcgggtgtgacgaagcgtatcaaggtgtttgaa
tactgcaatgttataaaagatgtcgttgacattcactacccagtcaatgagatggtgtgc
aactctaaaatcagttgtgtgacttggagtgcatatcacaagaacatgctggccagttct
gattatgagggcacaatcaccctgtgggatgctttctccggccaaaagtcaaagatcttc
caggagcacgaaaagcgttgctggagtgttgactttaacagaatggatcccaagctttta
gcgtctgggtctgatgatgccaaagtgaagttgtggtcaaccaatgctgaccactctata
gcctgtctggaggctaaagccaatgtgtgttgtgtcaagttcaacccagatagtcgctac
cacctggccttcggttctgcagatcattgtgtacactactacgatttacggaacactaaa
caggctgtgatggtctttaagggccacagaaaggctgtgtcttacaccaaatttttaaac
accaaagaaatagtatcagcgtccacagacagccaacttaagctgtggaatataaaaaag
cccacaaacctacagacatttaaagggcacattaacgagaaaaactttgtgggtttggct
acagatggagactacgttgcttgtggaagtgagaataattctctgtatgtgtattataag
ggcctgtctaaacaactactcacctttaaatttgacacagtccgcagtgctttggaaaag
gacaagaaagaggaggaaatcaatgagtttgttagtgctgttgcctggcgaccaggctcc
aatgtgatagtagcagccaacagtcagggaacggtcaaagtgctagagttggtgtga

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