Mizuhopecten yessoensis (Yesso scallop): 110466820
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Entry
110466820 CDS
T05079
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03030
DNA replication
myi03410
Base excision repair
myi03420
Nucleotide excision repair
myi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110466820
03410 Base excision repair
110466820
03420 Nucleotide excision repair
110466820
03430 Mismatch repair
110466820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myi03032
]
110466820
03400 DNA repair and recombination proteins [BR:
myi03400
]
110466820
DNA replication proteins [BR:
myi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110466820
DNA repair and recombination proteins [BR:
myi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110466820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
PTCB-BRCT
AAA_16
Rad17
nSTAND3
AAA_30
RuvB_N
AAA_14
AAA_33
BRCT_2
AAA_5
Motif
Other DBs
NCBI-GeneID:
110466820
NCBI-ProteinID:
XP_021379264
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MDIRSFFSSANAKKTNNASNKTVRPEPSKLNVKGKSTNEKTGRRGNDGSKSTEKGRGSDK
KGKGSYSRGKTQSKSKAKRVIALDSDDEDVNGNVAVKKDEKQLDEGTKKKRKRQVSSEER
NEDTVSSHRKVGKKAHLIESDSDEEPIPRKKAGSGNDKKKTGIVFKEDSGLSVDGVVISI
VVILKKLKFLLTDSDEEPIPRKKAGSGNDKKKTGIVFKEDSDEEPTKKSSMGSFLKTPSP
QKVKSKTEIKKTETKTPVNVSDFFGSSSVQRSDRKTAVSKRKLDEDEEIHEDDDFEKTLA
QLDDVQKSKKPRLSETSPQKSASTPSPSGNLASKLAAKAKQFSMETSTRKVKEEPKTLVP
ETPEPKQILKKASPVKLSPKKVLSPQKDVSPKKPSPVKSEKAHAPKVSPGKPSKTSPPKS
ASTKTSPDVPELASRTSYRSYLTREGPQSLGAKEFPEGGENCLEGLTFVVTGVLESFDRD
DVKREVERYGGKVTGSVSKKTNYLVAGRDSGESKLQKARGFGTTILDEDGLIEVIRTKPG
KKSKYVIQAEESFSKEKSKTPVQKTKSVSRLADFERRASSSTPSSSSPVKKEGKVSDEPV
LMWVDKYKPTGLKQLIGQQGDKSNAKKLLHWLTNWHKNEAAGVKPQGKFFGKDDGAGTKA
ALLSGPPGIGKTTTATLVCKEAGFSFVELNASDTRSKKSLQHEVAQALGNETLVDYMGPD
RSKSRGHKHCLLMDEVDGMAGNEDRGGLQELVSLIKGTKIPVICMCNDRNHQKMRTLSNY
CFDLRFQRPRVEQIKAAMMSIAFKEGLKIPPPALNEIILAANHDVRQVIHNISMWTAGNK
SITYDQAKDDSKRARKDMKLGPFDVCRKVFVGGDETANMSLIDKSDLFFHDYSFGPLFVQ
ENYINVFPYAARGNASKHLSLLARTAQSISDGDLVDKAIRSRMAWSLLPTQAIYSSVIPG
ELMRGSFPQMVSFPSWLGQNSSRGKSERILQETRTHMRLKISGDKRSLNMDYLPYMRHSL
TRPLVARESEGVPEVIHLMEEYDIIKEDFDNILEISKWPNSDDPFKQLSTKTKSAFTRTY
NKEVHMTPYSTGVLTKKKRGGGVSVAGPEEGDEEEEDAASEDSDNDKDDLQKDTMIKQTK
KKPAASKEKAKETTGKGKGKGKTSKKRS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgtagcttcttttcaagtgccaacgcgaagaaaactaacaatgcaagcaac
aaaacagtcaggcctgaaccctcgaaattaaacgtaaagggaaagtcaacaaatgaaaag
actggaagaaggggaaatgatggcagcaagtccaccgagaagggaagggggagtgataaa
aagggtaaaggttcatactcaagggggaaaactcaaagtaaaagcaaggcaaagagggtg
attgcgttggacagtgacgatgaggatgtgaatggaaatgttgctgtgaagaaggacgag
aaacagttagacgaaggcacgaagaaaaaacggaaacgtcaggtgagcagtgaagagagg
aatgaggacacagtctctagtcacaggaaagtgggcaaaaaggcacaccttattgaatca
gactctgatgaggaacctatcccaaggaagaaagctgggagcggaaatgacaaaaagaag
actggcatcgtctttaaggaggattcaggtttgtctgttgatggagttgtcatttctatt
gttgtcattcttaaaaagttaaagtttttgttgacagactctgatgaggaacctatccca
aggaagaaagctgggagcggaaatgacaaaaagaagactggcatcgtctttaaggaggat
tcagatgaggaaccgaccaagaagtcctctatgggttccttcctaaagacacccagtcca
caaaaagtcaaatccaaaactgaaatcaagaagactgagacaaaaactccggtcaatgtg
tccgacttctttgggagcagttctgtccaacgctccgacagaaaaacagcggtctctaaa
cgcaaacttgatgaagatgaagagattcacgaagatgatgattttgagaagactctagca
caactggacgatgttcaaaagagcaaaaagccgcggctgtcggagacttccccacagaag
tctgccagtacccctagtccgtcaggaaacctagccagcaagttggcagctaaagctaag
caattttccatggaaacatcgaccagaaaagtgaaggaagaaccaaagactcttgtcccg
gaaactccagaacccaaacagattttgaagaaagccagtcctgttaaactgtccccgaag
aaggtgctatcccctcagaaggatgtaagtcctaaaaaaccgtccccagtcaagagtgag
aaagctcacgcccctaaagtgtctccagggaaaccatcgaaaaccagccccccgaagtct
gccagtaccaaaacatccccagatgtaccggagttggcgagtaggacatcttaccggtcg
tacctgacgagagaagggccacagtcactgggtgctaaggaatttccagagggtggagaa
aactgcttggaaggtctgacatttgttgtgacgggcgttttagaatcatttgaccgtgac
gatgtcaagcgtgaggtggagaggtacggtggcaaggtgaccggctccgtcagtaagaaa
acaaactacctggtcgccgggagggacagtggagagagtaagctccagaaggcgcgggga
tttggtaccaccattctggatgaggacggcctcatagaagtcatcagaacaaagcctggc
aagaaatccaaatatgtgatacaagctgaggaatcttttagtaaggaaaaatcgaaaaca
ccagttcaaaagacaaaatcagtaagtagacttgcagatttcgaaagaagggcttcctca
tcaacgccatcatctagctctccagtcaagaaggaaggaaaagtgtcagacgagccggtg
ttgatgtgggtggataagtacaagccaaccggactaaagcaactgattggtcagcaggga
gacaagagtaatgccaagaagctccttcattggctaaccaactggcacaagaatgaagct
gcaggtgtcaaacctcaaggaaagttttttggaaaggatgatggtgctgggacaaaggca
gcactactgtctggacctccggggatagggaagactaccacagccacactcgtgtgtaag
gaagctggcttctctttcgttgagctgaatgcgtctgacacacgttcaaagaaaagtctg
cagcatgaggtcgcccaggctttgggcaatgagacacttgtggattatatggggcctgat
cgctcaaagtcacgaggacacaagcactgcttgttgatggacgaggttgacggtatggct
ggtaatgaggatcgtgggggtctacaggaactggtgagcctaatcaagggcacaaagatc
cctgttatctgtatgtgtaacgacagaaaccatcagaagatgagaacgctgtccaactac
tgtttcgaccttcgattccagcggccgcgtgttgagcagattaaggcagccatgatgtcc
atagcttttaaggagggattaaaaatcccaccccccgctctaaacgagatcatcctggca
gccaatcacgacgtacgccaggtcatccataacatttccatgtggacggctggcaacaag
tcaatcacgtatgaccaggcgaaggacgactccaagcgtgctcgaaaagatatgaaactg
ggaccttttgatgtgtgtcggaaggtgtttgtgggtggagatgaaacagcgaacatgagt
ttgattgacaagtcggacctgtttttccacgattacagctttggtccattgtttgtgcag
gagaactatattaatgttttcccctacgctgcaaggggtaacgcatcaaagcatctgtct
ctcctggctcgtacagctcaaagcatctcagacggggatctagtcgacaaagccatccgc
tcacgaatggcatggagtctcctcccaacccaggccatatattcgagtgtgataccagga
gagttaatgcgtggcagcttcccacaaatggtgtccttcccttcctggcttggacaaaac
tcgtcacgggggaaatcagagaggattctccaggaaacacgtactcatatgaggcttaag
atctctggtgacaaacgtagtctcaatatggattacctcccttacatgcgccactcactg
acgcgccccctggtggcacgagaaagcgagggcgtaccagaggtgatacatctgatggag
gaatatgacatcattaaggaagactttgacaacatcctggaaatatcaaaatggccgaac
agtgatgatcctttcaaacagctttctaccaagactaagtcggccttcacaagaacctac
aataaggaagtacacatgacaccctactccaccggagtcctcaccaagaagaagcgtgga
ggaggtgtgtcggtggctggacctgaggaaggcgacgaggaggaggaggacgctgcatca
gaagacagcgacaatgacaaggacgacttacaaaaagacaccatgattaaacagacaaaa
aagaagccagctgcaagcaaagagaaagctaaagaaacaacaggcaagggtaaaggcaag
ggcaagaccagcaagaagagatcctag
DBGET
integrated database retrieval system
