Mizuhopecten yessoensis (Yesso scallop): 110466989
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Entry
110466989 CDS
T05079
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
myi04990
]
110466989
Domain-containing proteins not elsewhere classified [BR:
myi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110466989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
CILP_5th
Ig_3
CILP
Ig_2
I-set
TSP1_spondin
CarboxypepD_reg
V-set
TSP1_ADAMTS
B277
Motif
Other DBs
NCBI-GeneID:
110466989
NCBI-ProteinID:
XP_021379506
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MDTNANKKFRPFNAFMNLQTERSDVFEIAVKPVSSPNRIKTFLIAATVITGIGLVVAISV
AIALKIKSSDAVHKYNQPLGKIGKTTTSTTRSTTTGPQLSSSTAGLTTTTPAPSANGTWN
NWGSWTSCGATCGTGYHTRYRTCLRTSANDPICQGEYVETTTCSLATCPVYGVWTTWSGW
AVCDVTCGGGTHLRTRVCQKSSSSDLDCVGSWSQSQACNRWSCPDCSQTCTTGVLNADCT
ACECASNTVQGIVRNHVNVPLNEASIAHASVPYKTLATTNETGGFVLDTTCEAVEVVITR
AGYADVTVVVTSTTVTVQMSLTEYPAISMNPKSRVRVQGENVTFCCEAYGNPAITSYEWM
KGGVLIDDTKYPDGYNLTLNDVTISDSGEYKCRANSPVGAVYSASALLTVKSTKAEFCED
AYEEKKISLPSDCVQADNTNLYEVGGCAKKTCRSSNNEDGLCGPTKKFCCIPSSEEERTV
QCSDYTLKVIVVTGCSCGECSSADIKVQGQVNGLNTGVALRLGTIYVNGSSVARTTFSGV
FSFTLPAGSLSVALTIEDTLFKTLLTTTRLLTFDETMEGAVYQKITLMEAAPRISISSDV
ENTVSMGNISGMPAIAEMIIPPNSYVDASGNPYNGVVKASVNIFDPRNVSSISAAPGSFE
FTDAEGDTQDLQTFGVIVLDFQDESGNKLNVVGNVTIKLDATFVESTYSGNVTDAKLWGL
NTVTGQWEEVGSMVIETSKRRKRRSARNYVVGQVPISAFRAINLDCYRGFKRCYFKTSVT
DTNKNPVNGYTVRVIHMTYPGERYGSTSEYVTAVKEMSCNSGSRQYTFCRSDSWGYIQAY
KRAEVYNPGVSGASGLSATALSRLNYKTTTNPVSIKASFQISNDLFRFYKSSTVNSFAEY
TLIPLSVGPTVAFSMSIPATAADHGPRLWYPYKNPTTMSEFKICMIKIAVDGQTSGLSFT
VKSKAGPNSGITDTILGVRQVAVENGGACIEYKCSGTYPLFKNVLTRISPDNRHDYTKVT
ITPVGRFCTVSWEGDIKLHSVNSGSNNIGIVSHEWFIPDTEEHGIYIYEKTESYETIDWD
DTRQTTRNMCREGVKSPSSNADPSMNAVDPALKFTCL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggataccaacgcaaacaaaaagttccggcctttcaatgcctttatgaacttacagacg
gagcgatccgatgtgttcgaaattgcagtaaaaccggtttcctctccgaatcgcataaaa
actttccttattgctgctactgtcatcacaggcataggtctcgttgtagcaatatctgtt
gccatagcgttgaaaattaaatcctcggatgcagttcacaagtacaaccaaccactgggg
aaaataggtaaaacaacaacatcaaccacaagatccactacaacaggtcctcaactctca
agtagtactgcaggattaacgacaaccacaccggcaccaagtgccaatggcacatggaac
aattggggatcgtggacgtcttgtggagccacttgtggaaccggatatcacacgagatac
agaacatgtcttcgtacatcggcgaatgacccgatctgtcagggagaatatgtggagacg
accacttgttcattggcaacttgtccagtgtacggagtatggacaacttggtcaggctgg
gcagtttgtgacgtcacttgtggaggaggtacccatttaaggacgcgagtttgtcagaag
tcatcctcctcggaccttgactgtgttggaagttggtcacagtctcaggcatgcaaccgg
tggagctgtccagattgttctcagacttgtaccactggtgtcttaaacgccgattgtaca
gcatgtgaatgtgcgtccaacactgtgcagggaattgtacgtaaccatgtcaacgtcccc
ttaaacgaggcttcaatcgcacacgctagcgttccctacaaaacgttagcaacaaccaat
gaaactggtggatttgtgttggacactacatgtgaggctgtagaagttgtcatcaccagg
gctggctacgctgatgtcactgttgtagtaacaagcaccacggtcactgtacagatgtcc
ctcacagaataccctgccatcagtatgaatccaaagtcacgtgtccgtgtccagggagaa
aatgtcacgttttgttgtgaagcgtacggaaaccctgctatcaccagctatgaatggatg
aaaggcggtgttttaattgacgatactaagtacccggatggatacaacttgacactgaat
gacgtcactataagtgacagtggcgagtacaagtgtcgcgctaacagtcccgtgggagct
gtgtactcagcgtcagccctgctgaccgtgaaatcaacaaaagccgagttttgcgaggat
gcgtacgaagagaaaaaaatcagtcttccatccgactgcgttcaggctgacaacacaaat
ctgtatgaagttggaggatgcgccaagaagacatgtcgcagttcgaacaatgaggacgga
ttatgtggtcctaccaagaagttctgctgcataccttcttcagaggaagaacggacggtt
cagtgcagtgactataccctgaaggtaatcgtcgtgactggatgttcctgtggcgaatgt
tcgtctgctgatatcaaggtacaaggccaggtcaatggactcaatactggtgtcgcgttg
cgtctcggtacgatatacgtgaatggatcatctgtagccaggaccacattctctggtgtg
ttttcgttcactctacccgccggtagtttaagtgtagctttaacgatagaagacactctc
ttcaaaaccttgctgactaccacaagacttcttacattcgatgaaacaatggaaggagca
gtttaccagaaaattacgttgatggaagctgcgcctcgtatatcaatttcatcagatgtc
gaaaatacagtatcgatgggaaatatcagtggtatgccagccatagcagagatgataata
cctccaaactcgtacgtggacgcgtccggaaacccttacaacggagtggtaaaggctagc
gtgaacatatttgacccaagaaacgtgagcagtatatcagctgcgcccggatcatttgaa
ttcactgatgcagagggtgacacacaggatcttcaaacttttggcgttatcgtcctggat
ttccaagatgaatctggaaacaaattgaacgttgtcggaaacgtgaccatcaaactggac
gctacctttgtcgaaagtacgtattccggaaacgttactgatgctaagctttggggactc
aacaccgtgacaggacaatgggaagaggtaggatctatggtcatagagacatcaaaacga
cgcaagaggcgatctgctagaaactatgtcgtaggacaggttccgataagtgcattccga
gctatcaacctagactgctatcgtggattcaaaagatgctactttaaaacgtcggtaaca
gacacaaacaaaaacccagtaaacggctacactgttcgagtcatacacatgacgtatccc
ggggaaaggtatggaagtacgtcagagtacgtcacagcggtcaaggaaatgtcgtgcaac
agcggttcccgtcagtatacgttttgtcgaagtgactcttggggatatattcaagcgtac
aaaagagcagaagtgtataaccctggtgtttcaggtgcaagtggactatcagcaactgct
ctttcccgtctgaactacaaaacaacaaccaatcccgtcagcatcaaggcatctttccaa
atatccaatgatctttttcggttctacaaaagttctactgtgaattctttcgcagaatat
acacttattccgctttctgttggtccaacggtggccttctccatgtctattccggcaacc
gcagccgatcacggaccaaggttatggtatccgtacaaaaacccgacaacaatgtccgaa
ttcaaaatttgtatgataaaaatagctgttgatggacaaacatcaggtctttccttcacg
gttaaaagtaaggctggtccaaatagtggaataacggacacaatcctgggagttcgtcag
gtcgctgtggagaatggtggagcttgtattgaatataaatgcagtggcacttacccttta
ttcaaaaatgtgttgacacgtatttcacctgacaatcgacacgactatacaaaagttacg
ataactcctgtcggtcgattttgtaccgtgtcatgggaaggcgacatcaaattacactct
gtcaactccggatcaaacaacatcggaatcgtgtctcatgagtggtttattcccgacaca
gaggaacatggcatatatatctacgaaaagacagaatcatatgaaacaatagactgggac
gacacacggcagacgacccgaaacatgtgtagggaaggcgtcaaaagtccgtcaagtaac
gcagatccgagtatgaacgcagttgacccggcactcaagttcacgtgtttataa
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integrated database retrieval system
