Mizuhopecten yessoensis (Yesso scallop): 110467017
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Entry
110467017 CDS
T05079
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03013
Nucleocytoplasmic transport
myi03015
mRNA surveillance pathway
myi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110467017
09122 Translation
03013 Nucleocytoplasmic transport
110467017
03015 mRNA surveillance pathway
110467017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110467017
03041 Spliceosome [BR:
myi03041
]
110467017
03009 Ribosome biogenesis [BR:
myi03009
]
110467017
03012 Translation factors [BR:
myi03012
]
110467017
Enzymes [BR:
myi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110467017
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110467017
mRNA cycle factors
Stress granule specific factors
110467017
Spliceosome [BR:
myi03041
]
Complex C
Other components
EJC/TREX
110467017
Ribosome biogenesis [BR:
myi03009
]
Eukaryotic type
90S particles
Helicases
110467017
Translation factors [BR:
myi03012
]
Eukaryotic type
Initiation factors
eIF-4
110467017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110467017
NCBI-ProteinID:
XP_021379555
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MAEREDRRVVPDDIMKNIEFETSEDVEVTPTFDNMGLREELLRGVYAYGFEKPSAIQQRA
IKPIVKGRDVIAQAQSGTGKTATFSMSILQCLDTQLRETQALVLSPTRELAVQIQKVILA
LGDYMNVQCHSCIGGTNVGEDIRKLDFGQHVVSGTPGRVFDMIRRRNLRTRSIKMLILDE
ADEMLNKGFKEQIYDVYRYLPPATQVLLISATLPHDILEMTNKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH
GDMRQDERDAIMKEFRSGASRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagggaagatagacgcgtggttcctgatgatatcatgaaaaacatcgaattt
gagacaagtgaagatgttgaagtcacaccaacgtttgataacatgggtctgagagaagaa
cttttacgtggagtatatgcctacgggtttgagaagccgtcagccatccagcagagagca
ataaaacctattgtgaaaggccgagatgtgatcgctcaggctcagtcgggtacaggaaaa
acagcaacgttctccatgtctattctgcagtgtttggacacacagttacgggaaacacaa
gccttggtgctttctccaaccagagaattggctgtccaaattcaaaaggtcatcctagcc
ctcggagattacatgaatgtccagtgtcattcatgcatcggaggaacaaatgtcggcgaa
gacattaggaagctcgatttcggacagcatgtggtatctgggacaccaggaagagtattt
gatatgatcagaaggaggaatcttagaacccgatctatcaaaatgcttatcctggacgaa
gcagacgaaatgctgaataaaggtttcaaagaacagatttatgatgtatacagatacctt
cctcctgctactcaagttctgctgatctctgctacattaccccatgatattttggagatg
accaacaaattcatgacggatcctatccgcattctagtcaagcgtgacgagttgacactt
gagggaatcaaacaattctttgttgctgttgagagagaggaatggaaatttgatactctc
tgtgatctgtatgacactctcaccatcacacaagctgtcattttctgcaacactaagagg
aaggttgactggttgactgagaagatgagggaagccaattttacagtgtcatctatgcac
ggtgacatgcgacaagacgaaagagatgcaatcatgaaagaattcagatcgggtgcaagt
cgagtgctgataagtacagacgtgtgggctagaggaattgatgtccaacaggtatccctg
gtcatcaattacgatctcccaaacaacagagaattgtacatccacaggattggtcgttct
ggaagatttggacgaaagggtgtgtccatcaactttgtgaaaaatgatgacatcagaatt
ctaagagacattgagcagtactactcgacacagattgacgagatgcctatgaatgtggca
gatttaatttaa
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