Mycobacterium sp. djl-10: BCA37_08105
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Entry
BCA37_08105 CDS
T10620
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
myj Mycobacterium sp. djl-10
Pathway
myj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCA37_08105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myj03021
]
BCA37_08105
03400 DNA repair and recombination proteins [BR:
myj03400
]
BCA37_08105
Enzymes [BR:
myj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCA37_08105
Transcription machinery [BR:
myj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCA37_08105
DNA repair and recombination proteins [BR:
myj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCA37_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ANW63570
LinkDB
All DBs
Position
1618592..1619644
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLGEEVIAENRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPATFDPSEVAGYDVATGTWNSDAGYDLDDNQDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgtcccaccctgggcgaagaggtcatcgccgagaaccgttcgcag
ttcgtcatcgaaccgctggaacccggcttcggctacaccctgggcaactcgctgcggcgc
acgctgctgtcgtccatcccgggcgcagccgtgaccagcatccgcatcgacggcgtgctc
cacgagttcaccaccgtccccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcctccgaagaggacgagccggtcaccatgtacctgcgcaagcag
ggccccggtgccgtcaccgccggtgacatcgtgccgccggccggcgtcacggtgcacaac
ccggacatgcacatcgccaccctgaacgacaagggcaagctggaggtcgagctcgtcgtc
gagcgcggccgcggctacgtccccgccgtgcagaacaaggcctccggcgccgagatcggc
cgtatcccggtcgattccatctactcgccggtcctcaaggtcacctacaaggtggaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tcgatcagcccgcgtgacgccctggcctcagccggcaagaccttggtcgaattgttcggt
ctggcacgggaactcaacgtcgaggcggaaggcatcgagatcgggccgtcgcccgccgag
gccgaccacatcgcgtcgttcgcgctgcccatcgacgatctggacctcacggtgcggtcg
tacaactgcctcaagcgcgagggtgtgcacactgtcggcgagctggtcgcccgcacggag
tccgatctgctggacatccgtaatttcggccagaagtccatcgacgaggtgaagatcaag
ctgcaccagctcggtctctcgctgaaggactcacccgccaccttcgatccgtccgaggtt
gccggctatgacgtcgccaccggcacctggaacagcgatgccggctacgacctggacgac
aaccaggacttcgccgaaaccgaacagctctaa
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